Array 1 81971-85898 **** Predicted by CRISPRDetect 2.4 *** >NZ_ULAJ01000008.1 Klebsiella pneumoniae strain EuSCAPE_ES076, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 81971 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 82030 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 82091 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 82152 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 82213 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 82274 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 82335 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 82396 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 82457 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 82518 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 82579 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 82640 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 82701 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 82762 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 82823 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 82884 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 82945 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 83006 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 83067 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 83128 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 83189 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 83250 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 83311 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 83372 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 83433 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 83494 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 83555 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 83616 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 83677 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 83738 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 83799 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 83860 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 83921 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 83982 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 84043 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 84104 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 84165 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 84226 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 84287 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 84348 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 84409 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 84470 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 84531 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 84592 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 84653 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 84714 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 84775 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 84836 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 84897 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 84958 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 85019 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 85080 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 85141 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 85202 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 85263 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 85324 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 85385 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 85446 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 85507 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 85568 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 85629 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 85690 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 85751 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 85812 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 85870 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //