Array 1 5094-4213 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAEPVQ010000021.1 Klebsiella pneumoniae strain k9 NODE_21_length_75919_cov_55.094049, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      5093	    29	 100.0	    32	.............................	CAACCTCAATTCCTAATGGCTGTCTAAGGAAA	
      5032	    29	 100.0	    32	.............................	CAGGGTTTGCCCTTTTGCACCGCGCAGCGGTC	
      4971	    29	  96.6	    32	............A................	AGCAACGTTTCCGGATTATATGGCTGGAACGT	
      4910	    29	 100.0	    32	.............................	TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA	
      4849	    29	 100.0	    32	.............................	TGGTGTTGTCCACGGTCACCCGCTGGCTGGAA	
      4788	    29	  93.1	    32	............CA...............	AGGTATTTGACCTCATCCAGAAAGGCACAGAC	
      4727	    29	  93.1	    32	............CA...............	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
      4666	    29	  89.7	    32	............CA..............C	CTTAGAGAAGCAAAAACCCCACCGAGGCAGGG	
      4605	    29	 100.0	    32	.............................	CCGAGATTGAGTAAAGCAAAGTAACGGCGGTG	
      4544	    29	  93.1	    32	............CA...............	CAGCGTCTGAACGGACGAAACATCCCTGTTGA	
      4483	    28	  93.1	    32	.....-.......C...............	CGAGCGCTCTCCTGGTAAATCGGTAGCTCGGA	
      4423	    29	  93.1	    32	............CA...............	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
      4362	    29	  96.6	    32	..............A..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
      4301	    29	  89.7	    32	............CA...........A...	CACTACCAGATCCGAATGGACACCCGTAATGA	
      4240	    28	  82.8	     0	............CAC........-....A	|                               	
==========	======	======	======	=============================	================================	==================
        15	    29	  94.7	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGCGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATCC

# Questionable array : NO	 Score: 5.51
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   GTATTCCCCCCGCATGCGGGGGTTATCGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [15-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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