Array 1 20244-19196 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMBC01000016.1 Gibbsiella quercinecans strain DSM 25889 Ga0244697_116, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 20243 28 100.0 32 ............................ GGCTTGCTCAGGTCTTTATCGTTCATCGCTTG 20183 28 100.0 32 ............................ TTAGCGATGTGCATTGCCCGTGCTGTGGAGCC 20123 28 100.0 32 ............................ ATGACGCCGGCAAGAGACTCACCCGCAAACAG 20063 28 100.0 32 ............................ TATCGAATTCTGAGCAACTGCTGCGCTACTGG 20003 28 100.0 32 ............................ TCGGGGAACAACGTATCGCGCGTATCACCGGG 19943 28 100.0 32 ............................ AGGCATTCGTCACCAGTAATAACGGGAAAAGT 19883 28 100.0 32 ............................ AAACGACATCACGCAGCTCCCGGCGCTTATCC 19823 28 100.0 32 ............................ CGGAGGGGAAGGAAGCGCGCCTGAGCTCTGCA 19763 28 100.0 32 ............................ TAAATGCCACGGCGAGGGCAACATTGATATTC 19703 28 100.0 32 ............................ TTATTCCGTCGCGAAGGTGATGCCGTCGATAA 19643 28 96.4 32 ..............T............. TCGGAATCCTTTCGCTGTCCTAATAACATGCG 19583 28 100.0 32 ............................ AGACGGACCTTCATACGCCCTCCGGGGGCGTT 19523 28 100.0 32 ............................ TCGAAATCAATTTCATGCAGACGCGCAAAGAC 19463 28 100.0 32 ............................ TTTATTGACTACATCATTTTGTTAGGCGCTGA 19403 28 100.0 32 ............................ GAACGCAGCCAGGACGACCACGAGAAAGATAA 19343 28 100.0 32 ............................ ATCAGACCCTAGCCGAAGGCCCGAAACCGCAC 19283 28 96.4 32 ....................A....... TATCTGGTAGCACACCGGCAGCGGAATGCTTG 19223 28 92.9 0 .....................A...G.. | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGCGTTAACTGAACTTCAGGCCGATGCGTGGTTGAAAGGGCTGCGGGACTATACGCAAGCCAGCGAAATTCAGCCGGTTCCGGCTAATGTAAAATTCAGAACGGTAAAACGAGTGCAAGTGAAAAGCAGTGCAGAACGGTTACGCCGCCGCTCGGTTCGTAAGGGCTGGCTGACCGAGGATGAAGCGCGCGAGCGAATATTGCTTTCTGCGGAGAAACGGGTCGCACTGCCGTTCCTGCAATTGAAAAGCTTGTCATCCAGGCAAATGTTCCGGCTGTTTGTGGAACAGGGCGCGCTACAGGATTATGCCGTAACCGGCCGGTTTAGTTCATACGGACTCAGCGAGAGTGCTACCGTGCCTTGGTTTTGACCTTTTTTTTACCGCTAATGCTAACGTACTGATTTTTATCATAGTATTAGCCGCCAGTAAAAAAAGCCTTTTTAAGCCAAAAGTGAATTTTTTCTTTAATACTTATACTGTTATCTTTTATCTATAACG # Right flank : TTATAGATAAAGCGACCATCCAGCGTGTAACAGCCCACTGCCATAAAGGCATCGCCGCTGGCAGTGGTGAACAATCATATCACTGCCAACCCGTCGATAAGGGCGCCGCGCCACCATGCATAGTCGTGGCCGCCGGTATAGATAGCAAGCTGGCTCTCAACGCCAGCGGCGCATAGCCGTTGGTGCAATTGCTCGACATGCGGAACCATCGCCCCTTCCAGTGCCCCCACGCACAGTCTGATCCGCACCGTCTGCGGCGGGCTGGACAATACCCGTTCGCTCACCCACGAGGTATCGCTTTCTTTAAACATGATCGGGCGCCGGCTGTTGTCCGGCATCCACCACATTGAGGGGGAGGTGCTGATTATGGCGCCGAAAACGTCAGGCGCGTGCACGGCGGCCATCAGAGCGGTTACGCCGCCCAGGCTCTGCCCGCACAGCACGGTCTGAGAACGGCCGGCCCAGGCTCTGTCTGGGTGTGCGGCGCGTACCTGCGGTAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //