Array 1 94952-95457 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJBMR010000004.1 Flavonifractor plautii strain MSK.5.7 IIKHCFKF_4, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=================================	======================================	==================
     94952	    33	 100.0	    35	.................................	TTGAGTTCTGCGATCCGGCCACGGATGCGCCGGAT   	
     95020	    33	 100.0	    35	.................................	TTGATATCCAAAAACCTCATCATCCTGGGCGGTGC   	
     95088	    33	 100.0	    33	.................................	AGCTTTACCGGCGTGAGGAGCCAGTAGACCCTG     	
     95154	    33	 100.0	    33	.................................	TTGGTCAGGTCATCCAGAGGACCCCTCTCAGCA     	
     95220	    33	 100.0	    34	.................................	TGCTATATGGCAATATACTTGTACAAAATAACGT    	
     95287	    33	 100.0	    35	.................................	TTTTTTATCCTCATCCTCCGGCAAGCGGACCCATA   	
     95355	    33	 100.0	    38	.................................	AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA	
     95426	    32	  90.9	     0	............A...............-...C	|                                     	
==========	======	======	======	=================================	======================================	==================
         8	    33	  98.9	    35	GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT	                                      	       

# Left flank :   GGACGCCTATCCGCCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAAACGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGTAAGCTGGAGCCAGCCCAGTATAAACTCCTTCAGGCCAAGCTGTGCGCAATCATGGATCCCGAACGGGACAGCCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAACACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGAGGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTCATGGAGCATAGGCGCGTTTGTTTTCGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCTCTGCTCTTTGGTAAAGTTTGCT
# Right flank :  CCGTCTTACAGAGGCGCCTGAGCCGTTTACAGGAGCCGCCGCATAGGGGCGCGGGTTGATTCAGATTTTTCACCCCGCGCCTCTATTGTTTGCGCTTCTTTTCGTTGACTGGTCTAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCGTATTATGTGGATTTCAACTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCATACCGGCGTCTTCCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATC

# Questionable array : NO	 Score: 9.21
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-8.20,-8.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [58.3-36.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.68,0.74   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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