Array 1 739-283 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_KE347615.1 Gardnerella vaginalis JCP8066 Scaffold9, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
       738	    28	 100.0	    33	............................	TGACACACCTAGTATACCCAATTCGGGCGTGTT 	
       677	    28	  92.9	    33	..A..........G..............	CGAGTATATACCAGAAGGATTCAGACCTACCTC 	
       616	    28	 100.0	    33	............................	CCGTATTTATACTGGCATTTTGAGTGATGCTGT 	
       555	    28	 100.0	    33	............................	CAAGAGTCCAATAAGGTTAAAACGAAGAAAGTA 	
       494	    28	 100.0	    34	............................	CTGTTTCCTTAACGCAACAATTTTGATACACTTG	
       432	    28	  89.3	    33	.......T.....G............T.	TCTACATCTTCGTCGTTTTCTTTTTCGTCATCG 	
       371	    27	  75.0	    33	............AG..A...C-....TT	GTCAAAACACGAAGTCAGCAACACCAACTGGCA 	C [346]
       310	    28	  71.4	     0	.G.......A....A..T.AT.CT....	|                                 	
==========	======	======	======	============================	==================================	==================
         8	    28	  91.1	    33	GTCTTTCCCGCATACGCGGGGGTGATCC	                                  	       

# Left flank :   TCGTAAGTGATTCTAAACCAGATTTGCAACGTCTAGAGATGTATGGTGTTTCCGGAACAGCATCAAGTAAAGCTTATGATAAGTTTTTAGGATCACTGATTAATGGCATGAGAATGCAATTTCGGGTGACACTTAACCCTGTTGTTGCTATTTCTGATACTGCTGAAACTCGCACTACTAGAGGTAGGGTAGTGCCACATGTTACTTATGATCAGCAGATGAATTTTTTGCTTAATCGCGCACAAAAATTAGGTTTTTCGTTGAACGAAAATGAATTCGCTATTGTTGAACGCGGATATAGCTTATTTACAAAGTCAGAAAAACCTATTCGATTAAGTAAAGCTGTTTATCAAGGTATTTTAACAATTAACGATGCAGACACTATGCGTAAAACACTGTTAGAGGGAATTGGCAAAAAGAAAGCGTATGGCTTTGGAATGATGACAGTAATTCCTTTATGCAACTTAAATAAGTAACGCTATTTATTGGGATTTTTAAGT
# Right flank :  CTAGAAGTGCGTTTATCAAAAAAGAAAGAGCTTAGCGTGTTGTTACTGCATATAATGGTGTGAAAGATAAGAGAGGAATTAAAAGTTAATGGATATTATGAAACTTTGTTATGACATGGTTGAGAAACTTCGACCTTATGCTGAGCCATACATGGATAAGCTCTCTAAAGAAGCAGCCAATAGTGCTATTAGAGCAGGCGAACCATCGATTGCAATTGATATTTATTTAGTAGAAGCATGGATGCACAAGAGTGCACCTAAAGAGTTGCTAATCGAAGCTTAT

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTTCCCGCATACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.80,-9.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [3-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [51.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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