Array 1 2209-2813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDBC01000018.1 Haemophilus parahaemolyticus G321, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 2209 37 100.0 33 ..................................... AATGCAAATGCCGCAACAGTTCAACCCGTTTTG 2279 37 100.0 35 ..................................... TTTATCATTTCATCTATATGTTGTTAAAGTGGTGC 2351 37 100.0 33 ..................................... ATCTCTTCACGTTTAGCACGTAAATCAATCGCT 2421 37 100.0 34 ..................................... GTAGATTTTGATTTTCTATTTGTGTTTCTGTTAG 2492 37 100.0 32 ..................................... TTCACAATCTCCATATCCACTCGTTGGAAATC 2561 37 100.0 33 ..................................... GATACTTTACCCTTCACTAACTCAAGTGCTTCT 2631 37 100.0 35 ..................................... GCAAGAGTGCTGATAACATCAGCAGAACTCTCAAC 2703 37 100.0 36 ..................................... GAAATTAGCCACAATCGCTTGCGCTTCGTTATGTGA 2776 37 91.9 0 ................................T.A.T | G [2802] ========== ====== ====== ====== ===================================== ==================================== ================== 9 37 99.1 34 GTCGTAAGACACTGCCCTGTTCCAAAGGGATTGAGAC # Left flank : ACAAGCAGTAACTTTTCAATTTTAGGAGGAAATATGCAATATCTCATCGGTTATGACATTACTAATGATAAACGGCTACAACGCATTCATCGACGAATGATCAATTTTGCAACACCAATTCAATATAGCGTATTTTTATTCGACGGTTCTGAAAAATTACTCAAAAAATGCTTGGAAGAAGTGATGGAAATTTTTAACAAAAAAGAGGACGATTTACGCATCTATCCCTTGCCACCCAACTGTACTCAATGGCAGTTAGGAAAATCTTGTTTACCAGATGGCATCATTTGGACGGCAATGCCGACAATGATGAGATAACCATTGATCATCACTAAAATTCTGGTAAAATACTCCACGTTTTCGACCGCTTGGTATGTAAATGAAATGTTAAGATTTGTTCAACATTTAACCAAATCAAGACCCAACTCTCTGAGTCTCGGAAAAAGTTGGGAAGTGGCTTCGGCAAGCCTTGTCGCACAAGGCTTGATGACCCCACTGCA # Right flank : TAACAAAGAGGCTGATATTTACTACAAATATCAGCCTCTTTATCGATTGGAGAAAACGTCTGTGATTACAAGCGGTATTATTTTTCCTCTTCTTTGCGAATTTCCTCTTTTTCTTCTTCCAAGATCTCAGCAGCCTCTTCATTCAAAGCTTTAGCATCACAATGCGGTTTGATGAAAGGTTTTGGTGTCCAATATTTTTTCACAATTTCGCTAGAAAAGCCGTGTAGAACCTCCTCATTTAAGCGTTCTTGATCGAGCGATCTCACTTCGGCAATCACTTCATCCGCTTCTACTTGATTAATGCCGAGTTTCATTAAGGTGGCTCGGCTTAAAGTTAAGGCAGATTCAAACGTTTCACGCACAATAAAGTCTACATCCTGTTTGATCAAACTTACCGTTGTTTGGCGGTCGTATGTTCGGGTTAAAATTGGCAATTCTGGGTAAGCCTCTTTTAATTGACTGACAATTGCTTCAATGCGGTCAGTATCATTAATCCCAAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTAAGACACTGCCCTGTTCCAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 76931-76466 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDBC01000003.1 Haemophilus parahaemolyticus G321, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 76930 37 100.0 34 ..................................... CTTGTAGGCTGTCCAATTCCAGCCCAATTCGCCT 76859 37 100.0 31 ..................................... AATTACGCAATCAGTCCCCCGCACCTTGTAG 76791 37 100.0 34 ..................................... TCAAACGGAGGAGGAGGGCTTCCTCCTCCTTTTT 76720 37 100.0 35 ..................................... ACTACTTTCTGTTTCAATACGTACCGCATAACCGA 76648 37 97.3 36 ...........................A......... AACGGAAGAATAACTGCAATTAAGATCCACTCTAAT 76575 37 100.0 36 ..................................... TCACGACGGAAGTTCGCGTTGCCGCGACGACGTTGG 76502 37 83.8 0 ............T..................CATT.A | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 97.3 34 GTCGGAAGACACAGCCCTGTTCCAAAGGGATTGAGAC # Left flank : GTGATAGCCAAATGATGGTTATTGCTTGCCCAATGGCGTGGATTGATAGCGGTCGTAAAGAAGACTTACAACCATTCCACAACGCCTTAACCCCAGCCGACGAGCTAATCCCTGAAGGCATTACCGTTGCAATTGGTACAGATAACATTTGTGACTACATGGTACCGCTCTGCGAGGGCGATATGTGGCAAGAACTCAGTCTCCTTTCCGCTGGCTGCCGCTTTACCAATCTTGAAGAAATGTCTAACATCGCCTCAATTAACGGACGTAAGGTGTTAGGCTTGCTTTAAGATTTATTGGGGATATTTAAGGAATTAAGACTAGTAAAATCTAAAAACTCTGGTAAAATCCCCTCTGTTTTCGACCGCTTGATAAGTGAATAAAATGTTAAAATTTGTACAACATTTAATCAAATCAAGACCCAACTCTCTGAGTCTCGGAAAAAGTTGGAAAGTGGCTCTCGTAAGCCTTGTGCCACAAGGCTTCAAAATACCACTGCA # Right flank : TCTAAGCCTCCTTCGGAGGTTTTCTTTTTTGTTGTTGCAAAATCTTAAAGAAATTTCACCGCTTGGTAGCCTTTATCTACCCATCTTTCGCCTATTCCGCTATAATTCCCACAATTTTCCCGCTATCTTCCCTTTATCGGGAGCTAATTTTCAAAAGGACATAATTATGATGCGTACAAACTATTGTGGCGAATTAAACCGTAGCCACGTTGGACAAAATGTAACTTTAAGTGGCTGGGTACACCGTGTGCGTAACCTTGGTCGTTTTATCTTTATGCAAATCCGCGACCGTGAAGGCGTGGTGCAAGTATTCTTCGATGAGAAAGATGAAGCGTTATTTAAAGTAGCATCCAGCCTACGTGCAGAAGCCTGCGTGCAAATTCAAGGTGAAGTGATTGCTCGTGATGAGTCGCAAATCAATAAGGATATGGCAACGGGCGAAATCGAAGTGTTAGTAAAAAATGTGTTGGTATATAACAATGCTGATGTACTGCCACTCG # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGAAGACACAGCCCTGTTCCAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,1.15 Confidence: MEDIUM] # Array family : NA //