Array 1 3752903-3748495 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT593974.1 Halomonas sp. HL-93 chromosome I Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3752902 28 100.0 33 ............................ GAACTCATAATCCTCGTCCAGCGGGGTTTCGAT 3752841 28 100.0 32 ............................ CAACACGCACGGCGTTCAAGCCAAGCGCGCCA 3752781 28 100.0 32 ............................ GCGGAAAGCGAAAACGAATACGGCGAGCAGCG 3752721 28 100.0 32 ............................ AAGGACATTCTGAAGTTGGCCGAAGATGATTC 3752661 28 100.0 32 ............................ TTTCCCATCATGCCCTTCAGGATGCTGGATTC 3752601 28 100.0 32 ............................ TCATAGCCAAGCCTTATTCAGAATCTCGGTTT 3752541 28 100.0 32 ............................ TCGACCATTTCACGGTGCGGCAGCTTGTCATC 3752481 28 100.0 32 ............................ CAATCAGCGCAAGAAAACGCGGTGCAGCGCTC 3752421 28 100.0 32 ............................ GACTATTGCAACACCTCTGACTCCGCTCTCAT 3752361 28 100.0 32 ............................ TGGAAAACACCATTGCCTGGGAAATCACTCAG 3752301 28 100.0 32 ............................ GGAAGCGCCATCCCGTTCTTCCGTGGCGATAC 3752241 28 100.0 32 ............................ AATCCTTATCTCGCAAAAGTGATAGGAGAACC 3752181 28 100.0 32 ............................ TGCTGGCAGGTGGCCTGGTAAAGGTGCAAGGC 3752121 28 100.0 32 ............................ TCTACAGTGCGGGCATCCTGATCGATACTGCC 3752061 28 100.0 32 ............................ GGTGACGGCATCGGCCTGATTGGCCCGACGGT 3752001 28 100.0 32 ............................ GTAAAGGAATCTCGAATGACTAAAGCAACACA 3751941 28 100.0 32 ............................ TGAGACCCTGAACGAACGCTGCCAGACAATGC 3751881 28 100.0 32 ............................ TCAACGCCTACCCGTTCGCCGAGATTGGCCGA 3751821 28 100.0 32 ............................ AAGATCGACAAAGGTGCGGTTGAAGGCGATTG 3751761 28 100.0 32 ............................ ACGATCAAACCAGGGATGAAGCTCTGCGACAT 3751701 28 100.0 32 ............................ TTCCTGTTCAAAGCTCTTGCCCTGCTGCTCAC 3751641 28 100.0 32 ............................ GGGACGCCCTGGAAGCGGACCTTTTGCAGGTT 3751581 28 100.0 32 ............................ AGCAGCCGGGCGCGAGCGGAGGACGTGCTCGA 3751521 28 100.0 32 ............................ TCGACGTGCGCGCCCCAAAGCACGTTGCGCAG 3751461 28 100.0 32 ............................ TACTGGCTGCTGCATGACGAGCCCAACATGTG 3751401 28 100.0 32 ............................ TCTGCCGATGGAGTGCGACTGCCAGACGATGC 3751341 28 100.0 32 ............................ AATCGCTTGTTCAGAACTGAGGTGAATCATGA 3751281 28 100.0 32 ............................ GTCACAGCGCAGCATCGAAAGCCCGAGCACCC 3751221 28 100.0 32 ............................ TTAGCCTGAGTCATTAACCCCTCCTCCACTCG 3751161 28 100.0 32 ............................ TGCCTGACGGGTAGATCACTAACCCCCGCCTT 3751101 28 100.0 32 ............................ AGACGAACGCTCAGGCCTGCGTGCCGCCGTCA 3751041 28 100.0 32 ............................ CTGACTGGGCGGCGGATTCGGTGTCGCTTTTC 3750981 28 100.0 32 ............................ AGCTTGGCGTAGCGCTGGCGGCGGCCGGTAAG 3750921 28 100.0 32 ............................ AGCGGGATGCAGTCGACGCCCCGCAGCTCCCA 3750861 28 100.0 32 ............................ TTGTGTCCAAGGTCGTCATAAAGGGCGACTTC 3750801 28 100.0 32 ............................ CGCAGCACGCCCAGCACTGCGGCCATATCTTG 3750741 28 100.0 32 ............................ TGGCTGCACTCGCGAATAGATCCTGTGGGTAG 3750681 28 100.0 32 ............................ TAGCACGCGCTGCCGCTGCTCACGGCGGCGAC 3750621 28 100.0 32 ............................ TCCAAGAGTAAACCGTTCGCAGGGTGGTGGCC 3750561 28 100.0 32 ............................ AACGTGACCGAGACGGCGAGCCGTAACACACC 3750501 28 100.0 32 ............................ CGGCACCGCTGGAAGCGCCCAGTAAATCGGCT 3750441 28 100.0 32 ............................ ACCACGTAAATGAGGAAACCAATCATGTCTAA 3750381 28 100.0 32 ............................ TATCAGTCGAGAGCCCTGGCCCGCTGCGACTT 3750321 28 100.0 32 ............................ ACCGTCCCAGCACCCAGGTAATTGCGATACAC 3750261 28 100.0 32 ............................ TGAAATGGGTCACCTGGTGTTGGCAGAGGTGA 3750201 28 100.0 32 ............................ TGGGTAAGCTCGGGGCCTTGATCGAACGCGGG 3750141 28 100.0 32 ............................ GCCCGCAGTCGTCGGCTGCTGTTTAGCACCCC 3750081 28 100.0 32 ............................ GTCTGCTCGGAATACGCACCGACTTTTCCAAT 3750021 28 100.0 32 ............................ TGCTCGACATCGAGCGCGGCGATTACACCCTT 3749961 28 100.0 32 ............................ TCCCAGGGGGCGCTAGGCAGGCGTAGGGACAA 3749901 28 100.0 32 ............................ ACCCGGGCCATGGCCGCGCCCGTCACGCCATT 3749841 28 100.0 32 ............................ AATAGAGATGCGCGCCCCGGCGCTTTGTCTGG 3749781 28 100.0 32 ............................ ATGCACTAGGTGGTGCGCTTCGTCTTGTACAA 3749721 28 100.0 32 ............................ AGCCAGAGCGACCCAGCGCCGCCAAGGGCGTT 3749661 28 100.0 32 ............................ TGGAGCAGGTGGGCATAATCTTTAACCATGGC 3749601 28 100.0 32 ............................ AAGAAGGCCTATATCAAGTGGCTGCGCGAGAA 3749541 28 100.0 32 ............................ AAGACGACCGGCCGCGCCTTCCTGGAAGACTT 3749481 28 100.0 32 ............................ ATACAGTGACGGACGGCAGGCCATAAAACTGA 3749421 28 100.0 32 ............................ ATTGAGCGTAAAGTGATTGAAATAATTGCACA 3749361 28 100.0 32 ............................ AAATGTACGACCCGCTATAATGTAGTCGCGCA 3749301 28 100.0 32 ............................ TGTTGGAAGTTAACCCGATGGCGTCTATTCAG 3749241 28 100.0 32 ............................ CCGCCGCGCTGAATTGCTTTTGCTATGGGTGA 3749181 28 100.0 32 ............................ TAGGTCACCGAATGCCGTCGCACGTGCATAGG 3749121 28 100.0 32 ............................ AGGAATACCGGCAGCCTCTTTTCTTCCTTACG 3749061 28 100.0 32 ............................ GGTGACGCGCTCTTCGTCTTTGAATTCGTTGG 3749001 28 100.0 32 ............................ GCCTGAAAGTCGCTGAAGAGCTGGAGGAAGCG 3748941 28 100.0 32 ............................ AGCACGCCGAGGATGAAACCCCGGGCAATCAT 3748881 28 100.0 32 ............................ AGCGGTTATAGCGGGCCTGGGCGCGCATGGCC 3748821 28 100.0 32 ............................ TGCAGGCAACCCGGAGCCTTATCTCAAAGCCA 3748761 28 100.0 32 ............................ TGCGCCAGAGCTACGCCGCCGGGCGTGAACGG 3748701 28 100.0 32 ............................ AGCGACCAGCAAGCCCAGACCCAAGGCAATGT 3748641 28 100.0 32 ............................ ACTCCCCGATGCTGGCCACAAAAGCGACGAGC 3748581 28 100.0 32 ............................ AACGGCCCACGCTGTGAAGATGGCCAGGTTTG 3748521 27 82.1 0 ...G.................A-..T.G | ========== ====== ====== ====== ============================ ================================= ================== 74 28 99.8 32 GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGTTTGCAGCAGCTAATGAGTGCAGATTGGCTAACCGGCATGCGCGATCACACCCAGGTTAGCGAAGTGCTTACGGTGCCTGCTAGTGCTCAGCATATCAACGTGGCGCGTAAGCAGTTTAATACGGGGAGTGAAAGCCGGGCCAAACGTTACGCCAAACGGCATGATATCTCGGAAGACGAAGCGCGGAAGATTTATGCCAAGCTGGCGGAACGGCGTATTGAGCTACCCTTTGTGCAGATCAATAGTCGTTCTACCCAGCAGCGTTTCAGCCTGTTTATTGAACACAGCAAGCCCCAGGAAAGCTCGGTGGCGGGAGCGTTTAACCACTACGGTTTAAGCAGTAACGCGACCGTACCGTGGTTTTGACCCTTTTTTTCAACATGAAAATTGGTAACCAATAATCAATCACTTAGCGGTATCGCTCAAAAAAGAGTGATACCGCTTTTTTCGGCTAAAGCTCTTTAACAATCAGCATATTAATTTTGATAAGCTCTA # Right flank : ACGTTTATGATGCCTAGCCCTATTCCTCCGGTGCAGGCTCCATGGCCCGTTTGTCGTCGGGCAGGCGGACGGTGTCGCCTTTTTGGAGCTTGCCTCGGCTGTCCAGGCGTTGGCCTTGGGCGTCGATGATGGCGACCACATCACCAATGCTGACGGCATCGTCCTCGCGGTAGCTGCGTACGTCGATGCGCACTGAGCAACCCTGATACCGCGCCGTGAGAATGTCGCCGGTATGGGGCGTGGGGTCGAAATTGGCGTCTTTGGCGTAGAGCTGAGTTACGCTGGCGCTTCCTGGCTCATCCCATTCGATGTGTCGATGCATAACAAATTCCTTCTTCGTGTTGTGTTGTAAGGGACAAAGGTAAATGTCTTTACGTTAGCGTAGCCTATTCGCCGCTTTCGCTCTGGGCGGGTTGGCCGATGTGCTGGAACATAAAGTTAAGCGCCGCAGGCAGGCTAGCCCGCCATACTTGCCAGGTGTGTCCGCCGGGGTACAGGTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTAGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //