Array 1 3238266-3235125 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGKN01000001.1 Klebsiella pneumoniae strain NCTC13685, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3238265 28 100.0 33 ............................ CTCCTTTGCAGGGCTCACTTGATAAGCTTCATG 3238204 28 100.0 33 ............................ ATCAGCAATTCTTTGCGCTTTGACGCTCAGTTT 3238143 28 100.0 34 ............................ TCGACGTTCACATTAAAGCCGCACAGGCCAACGG 3238081 28 100.0 33 ............................ TGCGACTCACTATAAGAGACATTACTTGAGATT 3238020 28 100.0 33 ............................ CAGGCGTCTTTAGTCTATACTTTAAGATAGGCA 3237959 28 100.0 33 ............................ CACGAAGTAACCTGCAGTAAGATACAAATCGCT 3237898 28 100.0 33 ............................ CGAAGATGGCGACTGGATCGAAGCTTGACATCC 3237837 28 100.0 33 ............................ TACGACTCACTATAAGGAGACATTACTTGAGAA 3237776 28 100.0 33 ............................ CGCCATGCGATCGCTGTATATGACACGTTTGGC 3237715 28 100.0 33 ............................ TGCCTTCACTTGCCATCACGCTAAAGATGTCAG 3237654 28 100.0 33 ............................ TTACATGTGTTCAACAATGGCCCATTCCCGGGG 3237593 28 100.0 33 ............................ TCGTTTACAGGGTTAACGTTGAGCGCGGGGCGC 3237532 28 100.0 33 ............................ CAAGGCGTCTTTAGTCTATACTTTAAGATAGGC 3237471 28 100.0 33 ............................ TACGACTCACTATAAGGAGACATTACTTTGAGA 3237410 28 100.0 33 ............................ TGGTTGGTGTTTCTTTGAGTTGGACATAGGGTG 3237349 28 100.0 33 ............................ CAAGTAAAGATTATCCCTTTATGGCTAACAACA 3237288 28 100.0 33 ............................ CGCTATCGGCATCCGCAACGACGATTTCGAAGA 3237227 28 100.0 33 ............................ TTGTACTTTTTTGCAAATGGGCGTAAAAAAGCC 3237166 28 100.0 33 ............................ TGGTTGGTGATTGGTGTTTCTTTGAGTTGGACA 3237105 28 100.0 33 ............................ CCATTCTCTACTAGGCTGTGAAAACTTTCTTTC 3237044 28 100.0 33 ............................ CAAATTTAACAAGGCTCGCTTCGGCGGGCCTTT 3236983 28 100.0 33 ............................ TTCTACATGCCTGAGCATCCGCGCACACAGGAC 3236922 28 100.0 33 ............................ CATCGCAAGTTTTATATATTTCGCGTAATTCCT 3236861 28 100.0 33 ............................ CCCATAGGATACTTACAGCCACCGAGAGGGAGA 3236800 28 100.0 33 ............................ TACGGCAGCAAAAAGACAATGGACATCTATACC 3236739 28 100.0 33 ............................ CTCGGGGAGGAAAATTCGCTGATGGCAATCACC 3236678 28 100.0 33 ............................ CCGGTAACGATGGTGTTGAAGGTGTGCGTTATG 3236617 28 100.0 33 ............................ CCAGTTCCGCCAGCGCCTGGTATTCATAAGTCT 3236556 28 100.0 33 ............................ TCGCAGACCATACCCTCCCGTCAACTTCACTGG 3236495 28 100.0 33 ............................ CGGGTTAAACAACAGCTTACGCGAAAAAGCAGT 3236434 28 100.0 33 ............................ CTTCAACGAGCAGCCGGTTGGAGACGAGGCTTT 3236373 28 100.0 33 ............................ CTTCAACGAGCAGCCGGTTGGAGACGAGGCTTT 3236312 28 100.0 33 ............................ TAAAAAAGCCTGCGGTTAGGCAGGCAATAAGCA 3236251 28 100.0 33 ............................ TCGCGAGGTGCGCCAGTCGCGCATTAAGGAGTT 3236190 28 100.0 33 ............................ CGTGGCGCTGGTGGCGCGCATCGTATCGTCGCA 3236129 28 100.0 33 ............................ TAAAATCGCAGGGGGCGCCATCAGGAGCGTCGC 3236068 28 100.0 33 ............................ TGAGCGAGCTTTCAGCCCCGTCCAGGTACCTTT 3236007 28 100.0 33 ............................ CTCGTTAACCAGGGCGGTTAGCTTCACATCACC 3235946 28 100.0 33 ............................ TTACTGTGAAGACGGCTGATGGTAACCACGTGG 3235885 28 100.0 33 ............................ CCATTTCCAGTTCCGGTGCCGAGATGAACACTT 3235824 28 100.0 33 ............................ CGTATGAACCCAACCGATGGTCACAATCTGCCT 3235763 28 100.0 33 ............................ TGCCACGATCAGTCAGTCAGCGGGCAAGTGGTA 3235702 28 92.9 33 ......................G.G... TGAGGAAAAAACTGATTGGCGTGATCGCCGGCG 3235641 28 100.0 33 ............................ CATAAGCAACTGCATGTAGTCTACGCTGTAATA 3235580 28 100.0 33 ............................ CGAGAAGCGCAGCAGAGGATCGACCAGGCGCGC 3235519 28 100.0 33 ............................ TTAAATTAGCCTCTCACGATAAAGGACTCGGTG 3235458 28 100.0 33 ............................ CACCACGAATATTTCGGTAAGTAAATGCTGTGG 3235397 28 100.0 34 ............................ CTATTCACTCTACACCACATTTTTTGACGGTACG 3235335 28 100.0 33 ............................ TGCCGACTTGGGACGAGGACCCGGAAGAATGCA 3235274 28 100.0 33 ............................ CACTGCGCGCATTGAGTCGCTGGAGTACACCAA 3235213 28 100.0 33 ............................ TGGAATGCTGGTCTGGCGCAGGAGTCATGCGAG 3235152 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 52 28 99.9 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TATTGAGATAAATATTCATTGTTTAAGTCAGGGAGTTTTTGGGTGGGGTAAAAATTTCCCCAGGCTGGGGTAAATTCTACCCATAATCATTACTATTCATTACTAATCAAAACTAATAAAAGAATAGAGTCAAAAAGAATCGCTGAAAGAAAAGGTAAGTCATCCTCTAGTTAACAAATAAAAAGAGCTACCTAAGTAGCCCTTCATTCTCTTCAGAGTCACATAGCATACGGCCTATTTCAATCTCTCTAACCAGAAATGAGCTTTATCCATTGCATCTTTATATTCACCATATTTACGTGCTTCATCCATTTCTTTACCCCATTCTTTCATTATGGCTTCATAGGTTCCATTCTCGATGGAGCGTTTCGTTAACTGGTTTAGCATTCTCATTCCTTCTTCGTGTCTCACTTTTTGCCAGTGGGTTAACTCTTTCTCTGGATTGGCCTCAGCTTCACGCTTCAGGGCTTGCTCGCGTTCCTCAGCGAAGAGTTGAGACA # Right flank : TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGGGTAATGACTCCAACTTACTGATAGTGTTTTATGTTCAGATAATGCCCGATGACCTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGTGACTTCCGTCCCAGCCTTGCCAGATGTTGTCTCAGATTCAGGTTATGTCGCTCAATGCGTTGAGTGTAACGCTTGCTGATAACGTGCAGCTTTCCCTTCAGGCGTGATTCATAAAGCGGCCAGCCATCCGTCATCCATACCACCACATCAAATACCGACAGCAGCTCCAGAAGACGCTCCAGTGTGGTCAGAGTACGCTCACCAAAGACGTGTGCCACCACCGTCCTGCGCATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //