Array 1 8195-11771 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEDJ01000040.1 Halorubrum ezzemoulense DSM 17463 NODE_40_length_28327_cov_11.7549, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 8195 30 100.0 36 .............................. TCGGCGAAGGTGCCAAGGTACTGCTGGCCGCGGGTG 8261 30 100.0 36 .............................. GACCACGACACGGAAGTCGTCTCGACCGATCCGTTG 8327 30 100.0 36 .............................. CTCGTACCGCCAGTAGTTGCCGGCCGGCGCGGGCTC 8393 30 100.0 36 .............................. CGAGTCCGATCCGTCAACTCATCGGGCGTCTCTGCG 8459 30 100.0 35 .............................. GTGTCATCCTGCGGCTTCGCGTTCGTGAACGTCGC 8524 30 100.0 37 .............................. GTCTCCGAGACGTGTTGGCTATTGATGTTCACCGCGG 8591 30 100.0 37 .............................. ACCTGCCCGGACGTGAGCGCGGTACGAATGGGCGCGT 8658 30 100.0 36 .............................. ATCCAGCTTGCCGTGGCGGCGTTCGGGATCACGAAG 8724 30 100.0 36 .............................. GCCGCGAGCGCCGAGTGCGTCCTCGAGAACGGCCTG 8790 30 100.0 35 .............................. AACCGTGGGTATCAGGGGTTCATCGACCGGGACAA 8855 30 100.0 35 .............................. GGGATTAACGGAACGGATATTCGGACCTTGAGGGA 8920 30 100.0 35 .............................. TACTCCGGGATCGGGCCAGCGATGCGTCTCTCGGA 8985 30 100.0 37 .............................. TGCGGCCACGTCCCGTGCTCACCTACACGTACAACAC 9052 30 100.0 36 .............................. TTCACGCACACGTACGACTGGTCGGGCCACGACAGC 9118 30 93.3 35 ..................C.G......... ATGGCCCAATGGGTCGCGTTCGACGCGGAGCGTGA 9183 30 83.3 33 ...........G...CTA..G......... TTGACCGTCGCCGCCGGGATGTCGTTGCGGATG A [9205] 9247 30 90.0 37 ......C.........T...G......... GGCCTCGGCCTGCGAGGGCAGCACGGCGTCGTGGCGC G [9262] 9315 30 90.0 35 ......C.........T...G......... GGGCTCCGCGTGTGGGGGCTGATCACCGACGTGGG G [9330] 9381 30 96.7 36 ................T............. CGACCTTCGCATTTCCGTATCGCCCCTTGATAAACT 9447 30 96.7 34 ....................G......... GTCCTTGCGTCGGAGGTAGACACGCCACGCTACG 9511 30 96.7 34 ....................G......... CGTCTCGTCAAACACGACATTACTCGGGTAGCGG 9575 30 93.3 35 ................T...G......... TTGAAGGGGCGACTCCGGAGTATCGCTCGGACTAT 9640 30 83.3 35 ...........GT....A..G........T TGCCACTCGTCGAGCGGGGCGAACAGCGTCGTCTC 9705 30 86.7 36 ........T.G.....T...G......... GCGTACGCCAGCGACAACGGCGTCACCGTGACGCTG G [9720] 9772 29 90.0 35 ................-T..G......... CCGCCGGCGCGGTGCGACACGCGTGAGGACGGCGA 9836 30 93.3 37 ................T...G......... ATCGAGGGCACGTCGCGGGCGACGATCAACCTCGCGA 9903 30 93.3 35 ................T...G......... ACGGAGACGGTGACACAACGCGGCCGGCGGTACGC 9968 30 86.7 36 ........T..C....T...G......... TTCGTGAACGGGCAGTTCCGCGCCGGCTTCGAGTGT G [9983] 10035 30 86.7 34 ...............CA...G....A.... GACATGTACGAGCTCGAACAGGCCATGCGCGAGC 10099 30 93.3 37 ...C................G......... CGCTTTCGCATCGCCCGCTCGTTCATCCGCTCAGACG 10166 30 96.7 35 ....................G......... CACGACGAATCGGGTGATACTGTCTACCCCTACTC 10231 30 90.0 38 .......G..C.........G......... AGTCGCTCAAGCCCATTATCTAAGACCTTTTGCCCATA 10299 30 90.0 36 ...C......T.........T......... TCGACCCGCAGCCGGTAACGCTCCGAGTCGACGAGG 10365 30 86.7 36 ...............CT...C........A TTGATTCCCACGTTCACTTCACGTGGGTTGATATCG 10431 30 93.3 36 ................T...G......... GCGTACGGTGCGAGCCGCGCGATCTCGTCGCCGAGT A [10446] 10498 30 86.7 34 ........T.G.....T...G......... AGGACAAAGGCGTAGTCCGCCTTTTCCATGCCGT G [10513] 10563 30 86.7 35 ........T.G.....T...G......... AACTCGGCCGCGAACAGATGCTCGCTGGCGGCGCG G [10578] 10629 30 86.7 35 ........T.G.....T...G......... GACCAGTTCCTTCGCCGGAACACCGTCAGGAACGA G [10644] 10695 30 83.3 34 ...C...........CT...T........T GTTTAAGTCAACGATGAGACTCAGTGGGTGAACC 10759 30 90.0 35 ...C.........T..............T. TACACGCTCGGCAAAGAAACGACATGGCAACGGTG 10824 30 93.3 34 .....G..............G......... CCGTCACCGTCGCTATCAATGTCATTGCCCTTGT 10888 30 93.3 35 ....................G........T ATGATCATGTTCAACGCTGGCGCGGTGCTGCTCGA 10953 30 93.3 38 ....................C........A TCGGGGATCCACGCGGTGTCGAACCGCGGGGATCACTG 11021 30 83.3 35 ........G..T..G.T...G......... ATCGGACTTGATGGGCCAATTGAATGGCAAGGCAC T [11029] 11087 30 86.7 36 ........T.......T...G........A AGCCATTACTGGATGGCCATTCGCGTCCGACAGGTC 11153 30 86.7 36 ........T..C....T...G......... CATGGCGGTTAGACCCGGTCGCAGGTGTCTGCGCTC A [11168] 11220 30 80.0 38 ........T.G.....T..CG..G...... GAGCTGTTCGGCACCTCGGTGCTGGTGATCCCGGCGGT T [11233] 11289 30 90.0 33 ...C...............AC......... AAGGAAAACGAAGCGGCGATCAACAACGCGATC 11352 29 83.3 34 .......GT...T...-............T GTCGATAAGCCGATCACCCGCGATTACGACGGCG 11415 30 86.7 35 ........T....TT...C........... CGACCTTCGCATTTACGAATTACGCCGCGATTATC 11480 30 86.7 37 ..............A.T...GT........ GAGCCGCACGGCGACCCTGCCATCAGCATCTCTAACA T [11494] 11548 30 96.7 33 ................T............. CCGTGCCACACACGCAGATGCGGCCCGACATCG A [11563] 11612 29 86.7 34 A.........-.....T...G......... TTCGTCCCAGTAGTCGATGTGATCGACAATACGA 11675 30 96.7 37 ....................C......... TGCTTCATGACGAGCGGCTTCCCGTTATCGTCCGTCA 11742 29 90.0 0 ........T.......-............T | T [11755] ========== ====== ====== ====== ============================== ====================================== ================== 55 30 92.3 36 GTTTCAGACGAACCCTCGTGAGGTTGAAGC # Left flank : GGAGTGAGTCGGTACTACGACGCGCTCCACGATCAGCGACGGACGGAGTCCCGATCCGATGACCTCGTGGAGGCGTTCGACGAAGCGTGCGGCGAGGCGCTTCGGAACGCGTCGCTGGTTAGTTCGGACTACCCGACGCGGGACTACCTGGTGCTGATCGACGATGTCGAGTCGGAGACGTATTCTCAGTATCGTGAGGAGCGTGACGACGGCCGCTGGAGTCAAGCGCGGGCGTCGTTCCAAGCGCTCAAGCAGACGCTGGTGTCGATCCCCGTTTCGGGGAGCTCGGAGAACGACGCTCCAACGGCGATCACCGTTTCCGAACGGGACGAGAGGTACGATATCGAGACGGGCCGGGGAGTGATCGAGGAAACGGTCCAAACCGATACCGAGGTCTGATCGACCATCGATCCCCCGGGGATACTCGACTATTGAGGGTCGACGAAAACACTCATCTGTGATCGGACGGGTTAGCAGGTATGTGCCCTGAATCGGGCATG # Right flank : TATAGTGCTGATCCTGGGCGCAATCACGCTTGTGGTAGTTACAGACGAACGTTTGTGCGAGTAGGGCGGTTCGCGACGCGTAGCGACCCCATTCCGGGTGCCCCCTTCTCTGCGCGGCGTCTTCGGTTGCTCTCGGTGTGGCGGGTTTTGCGCCGAGGCGTACATCACCTCTCGCCCGCACGCGAGAGACGCGCGTGTCTCTGGCGTCTGTGGCGTGCGGATTGATCAGCGAAACGACCCCCCGACCATCTCGGTCGAGGGGTGGATAATCGTGAGTGCTGTGCGAGGCGGGGGCGGTTCACAGGCGTTTTCACGTCGCCCGGTGTTCGGTCGGGTATGAGTGGACGTGAGACAGATGAATAACGATACGGCGACTGGGCATATTCCCTCGTTCGTGATCGGGATCGCGGGGGGGACGGGCGCCGGGAAGACGACGGTCTCCCGGCTCGTCACCCGCGACCTCGGCGACAGCGTCACCCGGATCCCGTTGGATAACTACT # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGAACCCTCGTGAGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [10-67] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //