Array 1 25559-25996 **** Predicted by CRISPRDetect 2.4 *** >NC_019396.1 Gluconobacter oxydans H24, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 25559 29 100.0 32 ............................. GTGCTGTTTTGGACTTTTTCGGGCCCGGTCAA 25620 29 100.0 32 ............................. CCATTTGCGCGGCCGTCACCAAATCCCGTGAA 25681 29 100.0 32 ............................. AAGGACAGCGCAAGCGGCTTTCAACAGGTACA 25742 29 100.0 32 ............................. GTGATTTTCCGGGTCACAGATACCTCCCATTC 25803 29 100.0 32 ............................. ACGCCGGCAGCCGTGTAGCCGGTCAGAGCAAT 25864 29 100.0 32 ............................. GACGGCATTTTTCAGAAGCACGCGCGCATCAT 25925 29 93.1 14 ................T........G... CGTGGGTCTCCGGC Deletion [25968] 25968 29 79.3 0 ...........G.AA.......C...GG. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.5 30 GTGTTCCCCGCATGTGCGGGGATGAACCG # Left flank : TCGGGAACTGCGCGTCCCGTTCCGGACGGCTCATCATGTCACGGGGCGTCTGGTCGGACTGGCCGAGCAGCGCGGTTGTGATCTGGCGGATCTGTCCCTTGAGGATATGCAGGCCGTGGAGCCGGGAATCAACGCTGGTATTTTTGATGTTCTGACGGTTGAATCCTCACTGGCTTCCCGCACCAGTCTGGGCGGAACTGCTCCGTCCAACGTGCGCCAGCAGGCTCAGGCCTGGCTGGAGAAACTTGGAGACGCTGCATGACACGTTTTCTGCTTGTTGGCCTGACCCTCGTAGCGCTCAGCACTGGCCTGAGCGCTTGCGGGAAGAAAGGGGCGCCACATGCACCCGGCCCCGCTTCCGACATCACCTATCCCCGGAGTTATCCGCCTGAATAACGGGCTTTCAGATAAGTCTTACAGGGGCCGAAAACAGGCCATAAAAATCGGTAGATTTTTGAGGGTGGAATTTTCCCTTTTCTGTCAGTACCTTGCCAGGAAGA # Right flank : GACTACTGGTGGCCGCAACTTCGATCTCGCCAAATAGTCCTCGCCTACTCGGGCGTGGATCTACCGCGAGAAGCGATTCCACTTTCTTCAGCCTCAGCGTTTTTCTGAAAACTCTACAGATGCAACAGCCGCCATCAGCTGTCCGCCAGAGCCTTGACTACCAGCGGGTGTGCCAGAACGTCCTTTGCAGGCCAGCCCATCGCCCTGAGCGCTCGAACCCCTTCTGCACCATCCCTTTTGGAAAGCTTCTTTCCGCTCTCATCCAGAATAAGAGCGTGATGCCTGTACTCCGGTTCAGGCCATTTCATCAGGGTCTGAATTACACGATGAATGGATGTCGCAGCGTAAAGGTCCTGCCCTCTCGTGATGCAGGTCACGCCCTGAAGGGCATCATCGTGGGTGACGCACAGATGATAAGACACGCCCGTATCTCTGCGTCCCAGAACAATATCACCAAATTCATCCGCACGCCCCGCAATCCGACCATGACCCGCTTCATA # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATGTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 99852-100124 **** Predicted by CRISPRDetect 2.4 *** >NC_019396.1 Gluconobacter oxydans H24, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 99852 29 100.0 32 ............................. CACTTCCACGGCAGCAACCTGCGCAACCTCTT 99913 29 100.0 32 ............................. CGGACGGGCTACACTGAGGGCGTTGGTCAGCC 99974 29 100.0 32 ............................. CCGTATCGCTACGGTACAGGTTTCCGTCCTTG 100035 29 100.0 32 ............................. GGCGGCCCGAACGTGTTCACCACGTCCTGGAT 100096 29 89.7 0 .......................A..T.T | ========== ====== ====== ====== ============================= ================================ ================== 5 29 97.9 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CGCCTCGTCCCCATGATCGAAGATGTTCTCTCCGCAGGAGGCCTGTCACCCCCTGGAGCACCGGAAGAGGCCATGCCCGTGGCCTTTGAAGACCCGGAAGGATTGGCCGATGCTGGTCATCGTGGTTGAAAACGCTCCACCGCGACTACGAGGGCGGCTCGCCGTCTGGCTGCTGGAGATCCGCGCAGGCGTATATGTCGGTACCTATGGCCGAAAAGTACGCGAGATGATCTGGCAGCAGGTCTGCGCCTATATTGAACAGGGAAACGCTGTCATCGCATGGGCTGCTCCCAATGACGCAGGCTTCGAGTTCGACACCTGCGGCGCCAACAGACGATGCCCCGTGGACCTTGACGGATTTCGTCTGGTCGAGTTCGGTCCAGAAGCTGCCCTCCCCCTCCTGCCCGGCCCCCTCAATTCACCACGAAACCGACGCTGAAAAATCGGTAGCTTTTTGAAGTGGAAGATTTGCACCCATAATCATATACTTACAAACAAGG # Right flank : TTTACCGTCAGGCTTCTGAGCCCTGCACAACCGCACTCATTCTCCCCACATTCTTGCACACAAGGAGACAGATCATGAGCAAGCTCAGTAAAGAGGAACGGGACAGCCTGCGTGACAGTGAATTCGGGCTTCCTGAAAAACGGGCCTATCCCGTCGATACAAAGGCCAGGGCCCGGAATGCGAAAGCGCGTGCCACGCAGGAGCTGGAACGGGGGCTGCTGACACCGGAAGAACGGGATGAGATTGACCGGGCAGCAGATCGTAAACTGAACGAAGACTAAGCCAGAATCAGAAACGGCCCCGGATCACTCCGAGGCCGTTTCATCATTCAATTCAGCACTCAGTGAGCCTGCGCTGCCCGCAATGGAGCATCTGCCGGAACATCCTTCAGCGGAATACCCTGATACTTACCCGTCAGCGTCTTCAGGAACGCCACGATATCTGCAACATCCTGGTCAGTAATATCATGATCCGGCGTTTCGTAACGGGCCATGGCACGA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //