Array 1 229074-228566 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJNZM010000001.1 Vibrio parahaemolyticus 10290 isolate VP100010, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    229073	    28	 100.0	    32	............................	TCGACCATGGTCGATTCTGGACAGAATGGGTT	
    229013	    28	 100.0	    32	............................	GTTCTGCGACCAACCTATAGATGGCGGCGCGA	
    228953	    28	 100.0	    32	............................	TCAGACATACGACGGCCCGAAATCATAGCCAA	
    228893	    28	 100.0	    32	............................	GCTCAACAGGCTATTGAAGAAGAGCGCCGCTT	
    228833	    28	 100.0	    32	............................	ATCACGGCCCGACTCACCAACGCTTTGAATCA	
    228773	    28	 100.0	    32	............................	AAAATCTTCTTGCTGAACAGCAAGAATGTCTT	
    228713	    28	 100.0	    32	............................	TTTGCGTTCACTTATCGCGGCGCACTGCAACC	
    228653	    28	 100.0	    32	............................	AAGAACGCTTAGAACGACGTTTAGACATTTTT	
    228593	    28	  96.4	     0	..........................G.	|                               	
==========	======	======	======	============================	================================	==================
         9	    28	  99.6	    32	GTTAACTGCCACACAGGCAGCTTAGAAA	                                	       

# Left flank :   CGAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTTAAATCACCTGAGAGAATTGAACGCGATATGCAGAAAAAAGCTGAGCTTTGGGCGACTGAATCTGGCAGGTCTCTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTTCATTACCGTTTATCTATTTACATAGTCAACAGACCAAACAACGTTCACCCGATAAGAGCAGTAGATTCCCGTTGTTTATTGAGATGAATGACATCGGAATTAAGCAAGAAGGGCAGTTTGATTGTTATGGACTGAATGCCAAACTTAATCAACAAGGCAGTCTGGGAACTGTCCCACAATTTTAACCAACAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTTAAAATAGGCTTAAAATACATAGAGTTACAATAGATAGAATTTGGCAAGGTAAAAACATGATTTTTATCCTAACTATCTGTTGTAACTTTCTTTTATTGATTTATTCTAT
# Right flank :  GGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATATTATTCTCATAATATTCAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAATCCATAATTATTCATATTTAATTTAATTTAATTTGCCAAAATTTAACAAAAAACAAAAGTCAAAAGATATGATCGCTTGGAAAAATCGGTGAATAATGCATAAATTAATATTATGTGTATTATTATTGAAATTAATGATTGAAGTGTATCGTCTCGCGATAAGGAATAAAATAGTGTTGTGTAATGTTTGTAAATTGAATTATGACAAAACTATAAGGCTAGGTAGGATAGCCATTTGTGATGAATGTTTGATTTCTGCAAGTGATTTTTATAAAGAGCATAGTCATGAAAAGTTTGAAATTATATTTCAT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTAACTGCCACACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         R [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.40,-7.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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