Array 1 140005-141052 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJLU01000013.1 Gibbsiella quercinecans strain FRB97 GQ13_contig000013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 140005 28 100.0 32 ............................ GGCTTGCTCAGGTCTTTATCGTTCATCGCTTG 140065 28 100.0 32 ............................ TTAGCGATGTGCATTGCCCGTGCTGTGGAGCC 140125 28 100.0 32 ............................ ATGACGCCGGCAAGAGACTCACCCGCAAACAG 140185 28 100.0 32 ............................ TATCGAATTCTGAGCAACTGCTGCGCTACTGG 140245 28 100.0 32 ............................ TCGGGGAACAACGTATCGCGCGTATCACCGGG 140305 28 100.0 32 ............................ AGGCATTCGTCACCAGTAATAACGGGAAAAGT 140365 28 100.0 32 ............................ AAACGACATCACGCAGCTCCCGGCGCTTATCC 140425 28 100.0 32 ............................ CGGAGGGGAAGGAAGCGCGCCTGAGCTCTGCA 140485 28 100.0 32 ............................ TAAATGCCACGGCGAGGGCAACATTGATATTC 140545 28 100.0 32 ............................ TTATTCCGTCGCGAAGGTGATGCCGTCGATAA 140605 28 96.4 32 ..............T............. TCGGAATCCTTTCGCTGTCCTAATAACATGCG 140665 28 100.0 32 ............................ AGACGGACCTTCATACGCCCTCCGGGGGCGTT 140725 28 100.0 32 ............................ TCGAAATCAATTTCATGCAGACGCGCAAAGAC 140785 28 100.0 32 ............................ TTTATTGACTACATCATTTTGTTAGGCGCTGA 140845 28 100.0 32 ............................ GAACGCAGCCAGGACGACCACGAGAAAGATAA 140905 28 100.0 32 ............................ ATCAGACCCTAGCCGAAGGCCCGAAACCGCAC 140965 28 96.4 32 ....................A....... TATCTGGTAGCACACCGGCAGCGGAATGCTTG 141025 28 92.9 0 .....................A...G.. | ========== ====== ====== ====== ============================ ================================ ================== 18 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGCGTTAACTGAACTTCAGGCCGATGCGTGGTTGAAAGGGCTGCGGGACTATACGCAAGCCAGCGAAATTCAGCCGGTTCCGGCTAATGTAAAATTCAGAACGGTAAAACGAGTGCAAGTGAAAAGCAGTGCAGAACGGTTACGCCGCCGCTCGGTTCGTAAGGGCTGGCTGACCGAGGATGAAGCGCGCGAGCGAATATTGCTTTCTGCGGAGAAACGGGTCGCACTGCCGTTCCTGCAATTGAAAAGCTTGTCATCCAGGCAAATGTTCCGGCTGTTTGTGGAACAGGGCGCGCTACAGGATTATGCCGTAACCGGCCGGTTTAGTTCATACGGACTCAGCGAGAGTGCTACCGTGCCTTGGTTTTGACCTTTTTTTTACCGCTAATGCTAACGTACTGATTTTTATCATAGTATTAGCCGCCAGTAAAAAAAGCCTTTTTAAGCCAAAAGTGAATTTTTTCTTTAATACTTATACTGTTATCTTTTATCTATAACG # Right flank : ATTATAGATAAAGCGACCATCCAGCGTGTAACAGCCCACTGCCATAAAGGCATCGCCGCTGGCAGTGGTGAACAATCATATCACTGCCAACCCGTCGATAAGGGCGCCGCGCCACCATGCATAGTCGTGGCCGCCGGTATAGATAGCAAGCTGGCTCTCAACGCCAGCGGCGCATAGCCGTTGGTGCAATTGCTCGACATGCGGAACCATCGCCCCTTCCAGTGCCCCCACGCACAGTCTGATCCGCACCGTCTGCGGCGGGCTGGACAATACCCGTTCGCTCACCCACGAGGTATCGCTTTCTTTAAACATGATCGGGCGCCGGCTGTTGTCCGGCATCCACCACATTGAGGGGGAGGTGCTGATTATGGCGCCGAAAACGTCAGGCGCGTGCACGGCGGCCATCAGAGCGGTTACGCCGCCCAGGCTCTGCCCGCACAGCACGGTCTGAGAACGGCCGGCCCAGGCTCTGTCTGGGTGTGCGGCGCGTACCTGCGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //