Array 1 396196-398556 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZOU01000004.1 Granulicella rosea strain DSM 18704, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 396196 32 100.0 33 ................................ TATGAGGACCGGCGTCTCCGGTCGAAAGATCGA 396261 32 100.0 34 ................................ GCAAGGTCGGCCACGCTGTCTTTCAGCCCTACGA 396327 32 100.0 36 ................................ TACGATACAACAGCGCGCTCCGTTTACGGCAGGGTC 396395 32 100.0 33 ................................ TTCATCTTTTTGGACCCCATGACCACAGCTTAC 396460 32 100.0 34 ................................ CCGCCTCCCGCTCCGTGGGGCGGGCGCGGCCCCC 396526 32 100.0 35 ................................ TCTTCCTGGTTATTTCAATCTCCGCGTATGTCGCT 396593 32 100.0 36 ................................ ATCTGTGGACTACCCGGCAGCGGTAAATCAAGACTC 396661 32 100.0 33 ................................ CTACTTGCTCGGGACTACGCGCTCGACGTAGGT 396726 32 100.0 34 ................................ TTGAACATCACCGCATTGGCGATGTCCACGCTCA 396792 32 100.0 34 ................................ TGAATCATGCGGTTCACGAAGTTGTACGAGCTTC 396858 32 100.0 35 ................................ GTCTTGCCCTGGTCGGGTCCGTCGACGATGATCGC 396925 32 100.0 34 ................................ GAGATGCTCCCCGGCCGCGTGACCGAGGGACCGA 396991 32 100.0 34 ................................ AGCCGGCTCGATCCAGAAGTAGAAGGTCAGGCCG 397057 32 100.0 35 ................................ GTCAACAGCAGCGTGCCTGGGCATGCGCATGGATC 397124 32 100.0 35 ................................ TGGCGCGGCATGCGCAGAATGCCGGTGAGGCCGGT 397191 32 100.0 36 ................................ CATGAAATCGGCACGTAGGCATTGCAAACAAAGGAC 397259 32 100.0 33 ................................ TTCCCGGCGCCACCCGCAGCAACAGCGGCGTGG 397324 32 100.0 34 ................................ TACGAGAAGGGCGACCTGGTCGACGTCGGCGACT 397390 32 100.0 34 ................................ GAAAAGCGTTACGCTATTGAGGTGTCGCAGGTAG 397456 32 100.0 34 ................................ GCCTTGTCCTCGATGAACTTGTACGAGGTCTGGG 397522 32 100.0 34 ................................ CCTAGACAAGTAAGGCCGAGCGTGATTACATGCC 397588 32 100.0 37 ................................ GGCGCGGCGTATGATGCGCTGTCCGCGGGCGATGGCG 397657 32 100.0 34 ................................ GACCTATAACTTTCGCATTCGCGCGCTGCGTGCC 397723 32 100.0 35 ................................ CGGGGTATTGGCCGCCGCCGTACAGGCGATCGATC 397790 32 100.0 37 ................................ CCAAGGGCGGCGGGACGATGGTCTCGGGCGGCAACAT 397859 32 100.0 34 ................................ CTGAATACCGTACGAAGCGGACGAAACGCGGTCT 397925 32 100.0 36 ................................ TCCGCAGCGGTCAGGCTGGTTACGCCGGGGTTCGTG 397993 32 100.0 34 ................................ TGCTTCTGTATGGGTTGACCGGTGTTGACTGGTG 398059 32 100.0 35 ................................ GGCTTCTCAGAGGCGCACGATCCCGAAGTAACCCC 398126 32 100.0 34 ................................ AGTGACTTTCAGATATCCACCATACGCGAAGAAC 398192 32 100.0 35 ................................ GAGCGCCTTGTCTTCTCGATCAGCGATCAGCTCGC 398259 32 100.0 36 ................................ GCCGGAACATGGAACTCCACCGCGCAAACCACCGGA 398327 32 100.0 34 ................................ TCGAGACGCGCAGGGGCTGCGGCTGCACAGTCTG 398393 32 100.0 35 ................................ CATAGCTGGCTGCGACCTGCTGCATCGCTGCATCG 398460 32 100.0 34 ................................ CGCCTCTGAACAGCTACGTGATGAACAGTCTCGT 398526 31 96.9 0 ......-......................... | ========== ====== ====== ====== ================================ ===================================== ================== 36 32 99.9 35 GTCGCTCCCCCTGCGGGAGCGTGGATTGAAAC # Left flank : TTCTTTTGGAGATAGGGGCAAATGCTCGTACTGGTAAGCTACGATGTGAGCACGCGCGATGAAGGCGGCAGACGACGGCTGCGGCGAGTCGCTCGGGCCTGCGAGAACTTTGGCCAACGTGTTCAGAACTCGGTCTTTGAGTGCCTGGTAGACCCGGCGCAGTGGGTTACGTTGCGCGCACGGTTGATGAAAGAGGCCGATCCTGCTCAGGATAGCCTCCGCTTTTACTTTCTAGGTGCGGAGTGGAAACGCCGGGTCGAACATATCGGAACCAAGACGGCCTACGATCCTGAAGGAACGCTCATCCTCTGAGCGGACCAAGCGCGGACCTAAAGCATACACGTATCTGCTGGAAGATCCGCGCGAAGGGTAAATCGCTGCCAGCGAAGGACCTAGGCCCACCATTGACAGAAAAAATCCGCCGAACGCAAAGATTCATCCACTATCCGCGTTTCAGTTACGGTATATGCCTTTGCTTTCAAGGGCATATACTATAAGCC # Right flank : CTCTGTCGCAAGGTAGACGAGTCGGAGCAGCCTCTCGACGCTGCCATTCGCGAGTTTAGAGAAGAGACCGGCTTCGAGCCCATGGGGCCATTTCTTGAGCTTGGCTCGATCAAGCAGGGCGGACGTAAGATCGTGTCCGCTTGGGCATTTAAGGGAGACTGCGAGCCGTCGACTGCCATAAGCAATCTTTGCCAAATGAAATGGCCCTCAGATTCGGGTCGTCAGATCGCATTCCCGGAAGTAGATCGTGTTGGCTGGTTCGCGATAGACGAGGCTGAAAGGCGCATCCTCAAAGGGCAGGTGCCCTTGTTGCAGCCTCTTGCCGGGATATGATCAATCCAGGTGGGGTAAAGCGAACGGTTGCTGCGAGGACGAAGGTTCATAGAGCCTGGCGGCATATGCTTCTTGCCGAGCATGACATGCTCGAAATGGAGAGCTTGTCGTCATGCATCCCAATAACGCAAAAACTCCTGGACGGTGCCAAGGGCGAAACGCATGAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCCTGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.10,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //