Array 1 400-11 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKLW01000173.1 Acinetobacter soli strain TUM15231 sequence173, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 399 29 100.0 31 ............................. ATATCAAAAGGCGCATCTGCTGTCATCTCAG 339 29 100.0 31 ............................. TTTTCCTTTTTGCATGCTGCATAAGCCATGT 279 29 96.6 31 ............................T TCTAGCTTTTGCCTTACTTGTTAATGTTGGT 219 29 100.0 31 ............................. TAACGCCAAACGAGGAAGCCAACAAGAATTA 159 29 96.6 31 ............................T TGAATTCGACAAGATCAACAGTGATTTTCTT 99 29 96.6 31 ............................A ACAACAGCACGAACTTCTGTGTGTATAAGTA 39 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= =============================== ================== 7 29 98.1 31 GTTCTTCATCGCATAGATGATTTAGAAAG # Left flank : AGAAAAAGTAATGTAATTTGAATACTTGACTTGTTT # Right flank : AGTAAAAAATT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 60338-60009 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKLW01000014.1 Acinetobacter soli strain TUM15231 sequence014, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60337 28 100.0 32 ............................ AGACTTTTTTGGTGTCAAAGGCATAGGCTGCG 60277 28 100.0 32 ............................ GGTATTCAATTCATCGAGTTGGAAAGTTGGAT 60217 28 100.0 32 ............................ GACGTGTGTCGAGCTTCGTGGGCCGTTTGTGA 60157 28 100.0 33 ............................ GCTATCAAAGGCCAAAGCTACAGGCCGATTGGT 60096 28 100.0 32 ............................ ATTTTCCAATTTTAAACTTCAATAAAATGATC 60036 28 89.3 0 .......G.....T..........A... | ========== ====== ====== ====== ============================ ================================= ================== 6 28 98.2 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : TTAC # Right flank : GTTTGACGACTCAAAATCATCAATATTCAGGTAGGTATTTGATTAAAAATGCATATACTTAAATCAACAACAATAGTTTAGATTTTGGCACTTTTTTCTTATGCTCAAACAGCCCTTCCTCAAAAAGATAATTCAATATGCGCCAGTCATTTTATTTTGCATAGCATTATTTATCATACATAAAGAACTAGAGACCCATGAGTTTTCAGGCTTACTTAAACACTGGAACAATATTCCTTGGTCAATCGCGCTAATGGCATGTGGTTTGACATTAGCCAGCTATCTACTCCTTACAATTTATGATGTTTTGGCTTTAAGGTCATTAGGATATCGCAACATCAAATATAGATATATTCTATTCACTTCGTTTGTCAGCTTTGCTATCAGTAACAACACTGGGCATGCATGGGCCTCTGGAGGTTCAATCCGCTATCGTTTTTATCAAAAAATGGGCGTTCAGGGCTGGGATATTGCAAAAATCTCGGCTTTTTTAAGTCTGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 14446-13337 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKLW01000020.1 Acinetobacter soli strain TUM15231 sequence020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 14445 29 100.0 31 ............................. AACGGTGAAGTACACGGACTGTGGATTGAAT 14385 29 96.6 31 ............................T TTAGCATGAATATCCCGTGCTATGTTTTCGT 14325 29 100.0 31 ............................. GTCGTCTGGACTTTCTAACACATCATCAACA 14265 29 100.0 31 ............................. TATCAAAAGGCGCATCAGCAGTCATCTCAGC 14205 29 100.0 31 ............................. GTAGCTCAATTAGTCGCTCTGGACTTCAAAA 14145 29 96.6 31 ............................T GCTGAAGCACAATTGCTGTTTCAACTAGACG 14085 29 96.6 31 ............................T AAAACAAACTTGCCCGGATATCAATGAATTG 14025 29 100.0 31 ............................. AGCGAACCAGAAGGTTGGTACGAGCCGATTG 13965 29 100.0 31 ............................. CCCACCTGTAATCTACTCATGACTGTTCTCC 13905 29 96.6 31 ............................G TTATTTAGTGCACCGAAGCTATCACCATTCC 13845 29 100.0 31 ............................. AAAACCTCGCTGCATTAGATCATGACCGGCT 13785 29 96.6 31 ............................T GACTGGTTTGTCGAACCAGTATCAACATTCC 13725 29 100.0 31 ............................. AGGTAAATAGCTTTCAATTTCGCTGCAACCA 13665 29 96.6 31 ............................T CAACGGAAAAGTGGATTCATTTTTAGAATTA 13605 29 96.6 31 ............................C ATTTCTGTTGCTAAGAGTGATTTTCCCGATC 13545 29 96.6 31 ............................T TCAACACGAACACCCGTTTGATTAATCCAGT 13485 29 96.6 31 ....G........................ ACATCAAGCAAATGTTGAGGTGGGCAGCAAA 13425 29 89.7 31 ....G.......C...............T AAGCGAATCACAGGAAATGGCAATTCTTGTT 13365 29 86.2 0 ....A.......C...........A...G | ========== ====== ====== ====== ============================= =============================== ================== 19 29 97.1 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACACGATACTCTTACCAATATCGCGAATAACTACTTAGATCACGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCATTACCTATCTTGCATGGCAAAACACGCCACGGAGGTTTAGTATTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACAGACATATGTAGTAAAATCAAATAAAATCATACTATTAAGTCAAGTGGTTCTTAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATTAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : GCTAAAAATACCCTCCTCACATCGTATTTTCCTGCACCAAACTATTCATATAAGCCACGGCCGCTGTACGGTTTTCTACACAGAGTTTTTCAAAAATATGCTCAAGATGCTTATTTACAGTTCTTGGGCTGAGCTCTAATATCTCGGCAATATCTTTATTGGTTTTACCCAGTGCCAGCCAATGCGAAACTTCCGCCTCTCGCTGGGTCAGTTGCGGGCAATATTTTAAAATCTCCTCAACGCCCAAAGCCGGAGCAGACATTTTAATTTGCACCAGATAAGTGGCGTGCCCCACGGGCTGATCGTGCCATGGTGTAAGCAAAATAAGTTGCAGTTGATGTGATGCACTAGAATAGGTGCAACTCATTTTCTTTTTATTGTCTTTATCGCGTTTAATTTCGGCAAACCACTGTGTTAAACCAGTTTCAAAGCGTTCACGATCTTGCAAATACTGGTTCAGCAAAATATTGGCTTTCTCTGTGGTCCATGCAATTTTCCCG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 19539-19806 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKLW01000020.1 Acinetobacter soli strain TUM15231 sequence020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 19539 28 100.0 32 ............................ AAAGCAGAAAGTGCACCACAGGTCAATATTGA 19599 28 100.0 32 ............................ CGACTCCCCAAACTTCGCTCACATCTATTATT 19659 28 100.0 32 ............................ TGAAGTAGTGGGCCATATTCTTGAAGCTGGCG 19719 28 100.0 32 ............................ TTAATGATTGAAATTGAAATGGGGTTATTGGT 19779 28 89.3 0 .........A..G...........T... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 97.9 32 GTTTGTCATCGTATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTCGCCTGATAATCGGTAGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCGCTCAGATAGGGTAAATCAAGTGCTTGTTTCTTACTTAAACGAATTCCACCTTTTTCAATATTAGAATTAATCGTTTTTAAACTAAAGTGTACCGATTCTTCTAAAGCATTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATATAGCCAATTTTTAACACATTATTTGAAAAATTAAAGTGTTGAAGCAGAGATCTGCGACAAATTAAGTCGTAGAGACAATTGAAGGAAAATATTATATGTTCTATATATTTAGTCTAAGATGATTAGGTTGTATTTTTGAAAATCTGGAAAATTAATATAATTCAATAGATTATATCGTTATTCTTTTTTTAAGGTTTTTTGATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTATTTTGCTTGAACTTTA # Right flank : AAGTCCATCCAATGCTTAAGGCGACATATTTTGTCGTTAGAAAATAGTATTAAGTTGATCAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATTACATTTGAACTTTAACAATAAATTATGCACGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATCGAAGGCTTAAAAGAAATTCGTAGTGCCTTAAAAAAAGTAGCTACACGTCAAACGGCTGTTGCTGCTTATATTAATTTTGGTATGCGGCGTATGAAGCTGGCATGGGTTGTAGGAGCAAAACATAAATTTGCCAATGATGGTGCATATCCAGTTGCATCGATCAAAAAACAGCAAAAACTACTGATGTTAGATGAATGGGTTAAAGCAAGTAGCTTGTTGGCTGGGGCTGCAGGGGATATGCATGATATTGGCAAGGCGT # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTCATCGTATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: F [matched GTTTGTCATCGTATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //