Array 1 375-9 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF967990.1 Fructobacillus ficulneus strain JCM 12225, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 374 36 100.0 30 .................................... TTTGTTGGCTGCTAATCATGCTGCTGGTGG 308 36 100.0 30 .................................... TGCCGGTTCAGGAATGACACTAAACGATTA 242 36 100.0 30 .................................... GCCTGATAGTTTTATCAATTTTGACCAGTC 176 36 100.0 30 .................................... TTTTGTCGCGTGATGTGTCAATTCAATATG 110 36 100.0 30 .................................... CAGGCCGATACCTAGAGGCGAGTCAACGCT 44 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTCC # Left flank : TCTGCT # Right flank : CGATTTTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [10.0-5.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 8-306 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF968000.1 Fructobacillus ficulneus strain JCM 12225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================== ================== 8 35 100.0 31 ................................... CTAGTTTAACGGCCGTTTCTGTCGCTGGTTG 74 35 100.0 31 ................................... CTTGGCTCAAAAGCTGGTCAGCGACACACAA 140 35 100.0 31 ................................... CAGAATGTCGACATCATGTGAATAGCTGGGT 206 35 100.0 31 ................................... CTTGGATTTCTAAAAATAATTTACCAAATGG 272 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== =============================== ================== 5 35 100.0 31 GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTC # Left flank : TCTGCTCG # Right flank : CTCAAGTCACAAATGCTGTAACTAAGTTACTGATCAAGCACCCGTAAGGGTGCTTTTTAATTTTTAAAGAAATTTAATTTATTTTCGGTTGGCTAGCAATGAACAAAAGTGTATTATATTAAAATAAGATGAGAAAAAGGAGAGAATGATATGAGAGTTGGTGTCACTGCAGATGTTAATTTGCAAAGTACGGATATCATTAACTTGCAATTAGCAAGTTTTGCGCCAAAGCCATTGTTGGATGTTATCGAAAAGACAGGTAACGTGCCGGTCGTTTTTCCAATCACAAAGCCTGAATATGCTGCCGAATTGGTTAGCATGGTGGGTGCCGTTGTGATTCCCGGAGGACCAGATGTATCGCCAAAGTTATATGGCGAGGGTCCTCATCCTAAAATTGGGACCACTTACCCTGCCCGAGATGACTTTGAAGTTGCTGTGATTAAGGAATGCGTTAAGCAACATAAGCCACTACTAGGCATTTGTCGTGGAACCCAATTGAT # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 23179-23543 **** Predicted by CRISPRDetect 2.4 *** >NZ_DF968004.1 Fructobacillus ficulneus strain JCM 12225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23179 36 100.0 30 .................................... CATGGTATGAGCTAGCCTATCAAGAATTGG 23245 36 100.0 30 .................................... CATTGAAATAAAACTCTTTTTCATTACCCT 23311 36 100.0 30 .................................... CGGCTTCCGAATTGGACAAAACACGCTATT 23377 36 100.0 29 .................................... AGCAAAACCTTTTTCTAACTCACTCTCCA 23442 36 100.0 30 .................................... ATTATATTTTTTTTGGAAGCGAGTCAACTT 23508 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 100.0 30 GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTCC # Left flank : CGTTAGTGGGACCGATGTGCGTACTCATTATAGTAAGTTCATCGATGGCATCTTAACCAAAAATATTTCGGAAGAGGGATTGGATAAATTATTTCATATTAATATGCAAGTACAATCGATTCTGGCTGAAGAAATTATCGATAGTAATTTACCATTAAAAATTGAAGGAGAATGGCAACTAGAAAAATTGTTAAAATCCCAGAATATCAGTGTTGAAAGAGCCAATACTCAGTCAATTTTTGGTAAAATAGAAGATGTAGTACACGTGATGGGGATGCTCGACGAAAGTCGGTATCTCCTAGTAACTAATCTCACCCTGTACTGTGATATGTCAGAATTAAATCAACTCCATCAATGCCTTTTAGCTGAAGGCATCAATCTAATATCTCTAAACTTAAGTCAGGAGAATCCTATTTTTGGCGAAACATTTAAAACCAGTTATATTGATCATGATTTCGTACTATTTTGATAGTAAACGTATTATAAGTGACGGTCGGTAA # Right flank : CAATTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGATGTATGTCAGATTAATGGGGTTTCTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //