Array 1 20316-26123 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJBU01000012.1 Geobacter sp. SVR sequence12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 20316 37 100.0 32 ..................................... CAGCTTCCCCCCGACCAGACGCTGGAGATCAT 20385 37 100.0 34 ..................................... TGCCAAGCCACATTCAAGCGCGTGGTCAGATCGC 20456 37 100.0 35 ..................................... CCCACTCCAGGGTGATCTGCTTCACTTCGTCCAGC 20528 37 100.0 35 ..................................... GACCAGGATCCCGCAGCACTGCCGACACGACTTGC 20600 37 100.0 36 ..................................... ATATTCCAGGTAATCCTCCGGTGAGAAGTTGGTGGG 20673 37 100.0 36 ..................................... AGTTCAGGGAACTGAGCTTCCATACTCACGGAACCG 20746 37 100.0 34 ..................................... ATCCTGCCTGCCCGCATTGCGGATGGAAACCGGA 20817 37 100.0 36 ..................................... AAATATCTCTGGTATTGGGCGACTCGGGGGTATGAC 20890 37 100.0 35 ..................................... ATGTCCACCTGGGGTAGCACAGGATACGGCGCAAT 20962 37 100.0 36 ..................................... ATCGATAATCGTGAACAGCTTACCCCGGAGCCAAGC 21035 37 100.0 34 ..................................... AACGGTGCCGAAGGGCATGGGGACAACTACCCCC 21106 37 100.0 35 ..................................... ACGATCAACGCCGTTGATAGCTCCTGCCCCCCGCC 21178 37 100.0 39 ..................................... CGCAACAACGTTGGGGCCTGTGAGGATAAGGACGGGCGG 21254 37 100.0 35 ..................................... GAGAAATGATTGAACACTGCATAGCTCCGCAAAGT 21326 37 100.0 34 ..................................... GCTTAGTATAACCGAAAAGAACAGTGTACTCGTT 21397 37 100.0 35 ..................................... TTCTTCTCTGCGTCCATCTGCCACTTCTCAGGGAT 21469 37 100.0 36 ..................................... TTTTTGTAGGCGTTCGCATTCATCTTTCAGTGTGGC 21542 37 100.0 34 ..................................... TTTATCCCTTCATCAAGGGCCTGCATCACCTCTG 21613 37 100.0 35 ..................................... AGGTTTCCGGTGTGTTCTGTCTCAATACGATCCCC 21685 37 100.0 35 ..................................... AAATTATCGCGGTTCATGGGCTATTCCCCTTTTGC 21757 37 100.0 35 ..................................... AATGAGCATATGCTGATTTTTACACGCGGTCAGGC 21829 37 100.0 35 ..................................... CAAATCAACACAAAGCATTGGGGATTTGTGCCACG 21901 37 100.0 34 ..................................... AAGCACAATCATGGTCAAGGTCATACCGTCAAAG 21972 37 100.0 36 ..................................... ATCGGTGTACCTGATGGGCATTCTGCTGTACTCGGC 22045 37 100.0 35 ..................................... ATCGGTGTACCTGATGGGCATTCTGCTGTACTCGG 22117 37 100.0 36 ..................................... TTGACGAACTGGTGGCGGATCACAAGGGCGACATCG 22190 37 100.0 35 ..................................... AACACCGGGGCTACCCGTTCACCTTTGGGAGATAA 22262 37 100.0 35 ..................................... TTCATTGCTTACTGGTCTTCTCTCTTCCTCCCCTC 22334 37 100.0 37 ..................................... TCTCCGGTGCGTCCGGTTAAGCAGCATGGTTGCCGGA 22408 37 100.0 34 ..................................... ACTATAACCGTTGACAACAAGAAATACGGCCCGT 22479 37 100.0 35 ..................................... GTCTACTATTAAGTACAGTTTGTGAGTAGGATATA 22551 37 100.0 38 ..................................... CAGCCATCACTACCACAGACAAAAGCCCGTAGAGGACT 22626 37 100.0 37 ..................................... TCTGGTATCTGCAATTTTGACACCTTGTGACGGTAAA 22700 37 100.0 36 ..................................... CAATGTAATGTCAGTAGTGCATTCAGTCTGTAGTGC 22773 37 100.0 35 ..................................... TCAGAGGTCGCCAGGGAAAACGAGCAGACCGCCGG 22845 37 100.0 36 ..................................... CTTTCGATTCCGTTCTGTTCCTGCCGCACCGCCCGC 22918 37 100.0 35 ..................................... TTGAGAATGTCGGTGACTTTGACGGCCATGGCCTC 22990 37 100.0 35 ..................................... GTTTACCTGCTGACGCCATCAGTCAATGACGACGG 23062 37 100.0 36 ..................................... ATTTATGGCCGCATCGGCATCAACAGCCCATCGCCC 23135 37 100.0 36 ..................................... CTGATCAAGAAGCCGGATATCAAGGCCCTGGTTAAA 23208 37 100.0 37 ..................................... TGCACTACCGAATCCGCCTCGAAATCCTGTATGTATT 23282 37 100.0 36 ..................................... GAGAGATCAAAGAGGCGTCAGGGATTAAGGTAGAAC 23355 37 100.0 36 ..................................... AGTACGAATCTATGAAGGCTTTCAGAGCTTCCAGGC 23428 37 94.6 33 ......T................A............. CTTGAAGGGCATATCCTCCAAGAGGCTGTTGGT 23498 37 94.6 35 ......T................A............. ATGAGGTCCTCATCTTCAATCATGAGGCGGAACCA 23570 37 94.6 34 ......T................A............. TGGACTCTTCGTACGATCCAGCAGTAGGTTGGTG 23641 37 94.6 35 ......T................A............. AACTACTCGGTCGAAGTGATCCAACGAGGCAGCAG 23713 37 94.6 36 ......T................A............. TCTGCTCGGCGGAGAATTACCGCGCATGCCGTGCTG 23786 37 94.6 33 ......T................A............. TCCTTGGCCGTCTGCCAGTCAGCCTGCAACTGC 23856 37 94.6 35 ......T................A............. TAAAGAGTCAGGAATTATGATTTCAAAGGACAGCA 23928 37 94.6 35 ......T................A............. ACCAGATCTTTGTGAGTCAAAACCTTGTCGAACAT 24000 37 94.6 35 ......T................A............. ACGGCCATTAACGGCGCAAGAACGCATGGAAGCTT 24072 37 94.6 36 ......T................A............. GCCCTGGGCAATGGCGTGACCGGACCCACCGTCAAC 24145 37 94.6 34 ......T................A............. ATGGACGCAACCGGAAAGAATCTACCGGAAGGTT 24216 37 94.6 33 ......T................A............. CTTGACCATAACCAGGAGCATTGGGAAAAAGCT 24286 37 94.6 36 ......T................A............. ACCATCATAGGTTTCATCCGGTTCGGCGTTCGGGTC 24359 37 94.6 34 ......T................A............. GAGGTGTCGCCATGGAATACTTTATACATCAGCC 24430 37 94.6 35 ......T................A............. TGCTGTGAAGCTGGCAAGGCGATAAAGCAGATACC 24502 37 94.6 35 ......T................A............. AGCCTGTGGGCCAACTCGAAGGATTGCGACCTGGA 24574 37 94.6 37 ......T................A............. TATAAGCACGCGGGTGCTGATGGTTTGACTCGAAACT 24648 37 94.6 35 ......T................A............. TTGACCGGGTACAAGGCCGCCTCGGACTGGACGAA 24720 37 94.6 32 ......T................A............. GATTTCGTCCAGGTACGGGGACACCGACTGTG 24789 37 94.6 34 ......T................A............. ATCCATCCTGCTGTCCATCGTGGCCTTGCGCTCC 24860 37 91.9 37 ......T.......T........A............. GAGATGATGGGCCAGAATGCCGCAGAGCATCCCGATC 24934 37 91.9 35 ......T.......T........A............. CAACCTGACCGACGACACGGGGGATATCGTCACCG 25006 37 91.9 36 ......T...........A....A............. AGCAATGGCGTGGCGGTGCAGGGTTACCAGTCGGCT 25079 37 89.2 35 ......T...........A....A..C.......... AAATCAGCCGCCGAGACTGCCGCACAGAATGCCGC 25151 37 91.9 35 ......T...........A....A............. ACGACCGTGGCGGTCGAGGAATACGTGCCCATGAT 25223 37 91.9 34 ......T...........A....A............. GGTGACACGTCCCAATTGTTACCTATTTCGTTAG 25294 37 89.2 33 .....CT...........A....A............. ATGAACGCCCCGAGCAGCGACATCACCATTTCC 25364 37 91.9 34 ...T..T................A............. CTGAATGGCATCACATCGAGCCTGTCGCTGGTTC 25435 37 91.9 35 ......T...........A....A............. AGGCAGATCCCGCGGACGCTCCCCCGGCTGCAGCG 25507 37 89.2 34 ......TT......T........A............. GAGAAACTATTGGCCGCCCTGAAAGTAAAGCGGC 25578 37 91.9 36 ..................A....AT............ GGTGTAGTCCTGGATGTGGATCGTGTAGCCCATCGA 25651 37 83.8 34 A.....T.......T....GT..A............. TTGTTCAGGTCGGACTCGAACATCACTGCGTATT 25722 37 91.9 40 ......T.......T........A............. CAGAGAGGAAGCGGCGGGAAGAGGCAGATATCGTCAATTT 25799 37 94.6 34 ......T................A............. CTTCAGATTGCGCCAGCCCTGCATCCAGGCATCG 25870 37 91.9 35 ......T...........A....A............. CTGGTCATGGGCAAAACCTGGAGCGACCCCACCGG 25942 37 89.2 35 ......T.......T........A.........G... ACCGTAAAGCGCCCGTCCCGCAGGCGTTCTGCAGC 26014 37 97.3 37 ................A.................... GTCTGGTCATAGCCCCATGAAAATTGTAAAGAATGTC 26088 36 83.8 0 ......T...-...............GC...A..G.. | ========== ====== ====== ====== ===================================== ======================================== ================== 81 37 96.6 35 GATCCGCCAGTTCTCCGGGACTGGCGTGGATTGAAAC # Left flank : AACTCTATCAACTCCAATAACTCAGGACACTAACCATGTGGGTAGTTGTCTGCTATGACGTCAATACTGAAACACGGGAGGGGCGCAAACGGCTCCGGCGGGTGGCGCAAGTCTGTAAAAACTTCGGCCAGCGCGTGCAGAAATCAGTTTTCGAGTGCCAAGTGGATGAGATGAAGTACGAACAATTGCGTAAAAAATTGCTCAAAGAGGTCAAGCTGGAACTGGACAATCTGCGGCTATATCGCCTGACCGAACCGAGAGAGCAGAGGGTCGAGGAATATGGTGCTACCAGGACGTTGTTTTTCGATGAAGAAACGTTGGTGGTATGAGCCGCGCGAACCTAGTGCTCATTCAAAAACGCGGAACTTTCGCGATGATTGGAATCATTAGGGAAAATAGGAGGTGGGGGGATGGCATGCGGCGTGCTCAAACAACGAAAGTGACGGTTCGTGAAATTCCATATGTAACATGTTGTAATCTGTCCCTAATTTGAGGGGGCA # Right flank : CCGTGCGGACATTGATAAGTTTCGAGTACCACCCGGCGATCCGCTACCCCAGCACCTTCCTCGCAACCGCCAGCAACTGTTCCGGCTTGAACGGCTTGACGATCCATCCCGTTGCTCCGGCGGCCTTGCGCGACTCCTGGGATTCCGTGGTCAGCATGATGATCGGGATGAAGCGGTTGTGAGCGCCTGACCGGACGCCCTTGATGAGTCCGATGCCGTCCAGATGGGGCATGTTCAAGTCGGTGATCAGCATGTCGACCTTCTGCTTGCCCAGCTTGGTCAGTGCATCCCTGCCGTCTGTTGCCTCGATAACTTCATATCCGCTCTGCCTCAGCGTAAAGACCACCATCTGCCGCACACTGGCCGAATCGTCCGCTGTCATGATCACTTTTGACATCCTGCGCTCCCCGATAATTCTTCCTGCATACGCAATCATCCTCCCGACCTTCGCCAGGCAGCATCTTCCCGACCTGCTGCAGCAGCTCATCCGTTGTAAACGG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:0, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.78, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATCCGCCAGTTCTCCGGGACTGGCGTGGATTGAAAC # Alternate repeat : GATCCGTCAGTTCTCCGGGACTGACGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.60,-8.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-49] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //