Array 1 75841-75273 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOVC01000003.1 Izhakiella capsodis strain N6PO6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 75840 28 100.0 32 ............................ GAACTCGACGACGACACTTACCGCTTTATTTT 75780 28 100.0 32 ............................ TTAAACGGCCCATTATCTGTTCCCGGAAAATA 75720 28 100.0 32 ............................ AGCTCCGCGTTGCGCTCAGTCGCTTCCATCAT 75660 28 100.0 32 ............................ GCAGAGCTTGAAAAAATTCACGCTGAAATCGC 75600 28 100.0 32 ............................ GACTGGATACCAGATCGACCGGCCACTGCTAT 75540 28 100.0 32 ............................ TGCGAGTGTTGTCGCCGTCCGGCAGACGATCC 75480 28 100.0 32 ............................ TTGCAGCCCCGGTCAGTGCAAAACGTCTTCAG 75420 28 100.0 32 ............................ GAAGTTGAGGATACGCCTGAGAACCGCCGAGC 75360 28 100.0 32 ............................ CGTTTGAGAGCCGTTCGCCGCAAAGGCGTTAA 75300 28 85.7 0 ...........C..T.......C...T. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GCTCGGTGCGAAAAGGCTGGCTCACGCAAGAGCAAGCGGAAGAGCGACTGAATGCCGTAAGCGCTCAGCAGTGCCAGCTGCCTTATCTGAGTATCAAAAGCCGCTCTGGCGGACAATACTTCCGGCTTTTTATTCAGCACGGCGAGCTGGCTGAGTACCCGGTGGCGGGCCGGTTCAATAGCTATGGGCTGAGCCAGCAGGCCACTGTTCCCTGGTTTTAACGTCGAAAAACCGTTCCGCCGAGACGTCTGTTCTCCCGGGACGGTTTTCTCCGGTTATCAATAAACGCATGGTTGCTGCCGTAAAACTGGTCGGCACTGCCGCAGCGCCTCGGTGGGGTAACGCCGCACAAAGGCTAATTATCACCACACCCCTTTTTTATACGCCTGTAGTAACGCCTTGATTTATAAAGAGGGCATTCAGCGCCCGGAAAAAAGGGTTTTCGCCGCGAGCAGGCAAATAAGCCTGATAGGATAATGGGTTAGCGGGTAATCGCTCTT # Right flank : GGAAATAAATTGAGTTAACATCCGACTGTGCACACGCAAATTTTTGCAAGACAGCTGTTTTTCAGCGGCCCGGCTGCGATAATGCCCCTGTCAACGATAACGCTTACTGTGGAGCGTTAGTCGTACCAATCGTCAGAGGGCAGCGCTATGGAATATGAGCTATTACGCGATGTTACCGGCCAGCTAAAAATGCGTATGTCGATGGGCCATGAAGCGGTGGGCCACTGGTTTAATGAAGAAGTAAAACAGGATCTGGCGCTGCTTGCCGAGATTGAGCAGGCCGCCGCCAGCCTCAAGGGCAGCGAGCGTCAGTGGCAGCGTGTTGGCCATGAGTACACGCTGTGGATGGACGACCAGGAGGTGATCATTCGCGCCAACCAGCTCAATTTCGACGGCGATCAGCTGGAAGAGGGAATGCACTATTACGACGAAGAGAGCCTGGCGTTTTGCGGTGTAGAGGATTTTCTGCGGGTGATTACGGCCTGGCGTGAATTTGTCGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 84963-84455 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOVC01000003.1 Izhakiella capsodis strain N6PO6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 84962 28 100.0 32 ............................ TGTAACTAATAATAAAGGTGCTGTTTTCGGTG 84902 28 100.0 32 ............................ TACGGTAGCAATACAGGTAACCGGATCAGATT 84842 28 100.0 32 ............................ ATCGTCAAATTCGGATGGGGGTTTATCAGGTG 84782 28 100.0 32 ............................ TGATAGACGCAATTAAAAATCTCCCTCTAAAC 84722 28 100.0 32 ............................ TGCATTCCAATTTGCAGCACTTCGCCGGTTTT 84662 28 100.0 32 ............................ GCCAGCGGCTTTTAGGAATAATTGGTGAGGGA 84602 28 100.0 32 ............................ ATATCGACGCATGTTCCGGTATGCACCTCATG 84542 28 100.0 32 ............................ TGTGCTCGCAAAACGTTTCGCCATCCAGGTTT 84482 28 96.4 0 ......................C..... | ========== ====== ====== ====== ============================ ================================ ================== 9 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCGGCACCGGCGCTAACGTTTACCTGGCCTCAGCGGAGTTGGCAGCCGTTGCGTCCTTGCTGGGAAAACTGCCGACGCCAGCGGAGTACCAGCAGTTTATGCATCAGGTGGATAGGACCGCCAGCGATACCTATCGCTACCTCAACTTTGACCGCTTGTCGCAGTATACGGAGAAAGCGGATGGGGTGATTTTTCAGACCGCAGTCTGACGCGAAAGCAACCCTGACAAAACCCGTGGCATAGCGCTGCGGATCTGCAGTAAAAACGGCCAGAGGTAACTCTGGCCGTTTTTTTGTGGGCAACGCTTAGTCTTATGAAGCGCGTCGCTGACGTTAGCTATGCCGGTGTGGAATACCTGTCCTCAGCAAAACCCTTTTTTATTCTCAATTTTTAACTCGTTGATTTATTGAATAAAGAAATGCCGCGCAGAAAAAAGGGTTTTTCCCGTCAGTTAGCGTTAAAGGCTTTACCAACAAGGCATTAGCGGATTATGATTCTT # Right flank : AGTATTCGCTACCCGATTGAGTTGCTGGATGCTCACCGCCGCACAAAGGGTCTTTTCATTCGCCCTTCGCAGATTCATCACTCCGTTTAGATCAACGACGCCCCCCGCGCTATAACGTTTGGTGGCTAAAAGCGGGCCGCTTTTATCAGATTAATTCTCTGATAAGGAAACTTTATTTACAGAATGTTATTCAGATCTAATTTGTACGACATTCATTCCGGCTATTATTGATGTGAATTCTTGAAAGGATTTTGCCATGGGGACAGAGGACGTCAGGCCTTCGGATTTGAAAACTATTCTGCATTCAAAACGTGCCAATATCTATTATTTGCAACACTGCCGCGTGCTGGTTAAGGGCGGTCGGGTTGAATATGTTACCGAGCAGGGCAAAGAGTCGCTTTACTGGAATATTCCCATTGCTAACACAACGGTGGTGCTGCTTGGCACCGGAACGTCGGTAACCCAGCTCGCCATGCGGGAGTTCGCACGAGCGGGGGTGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 90989-89522 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOVC01000003.1 Izhakiella capsodis strain N6PO6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 90988 28 100.0 32 ............................ TCAGTTAATCGTGACGACGGAGAAATAGTATA 90928 28 100.0 32 ............................ ACTCACCAACAGAATCAAGCTGCGGCCCGTTA 90868 28 100.0 32 ............................ ATTCCCGAAAGCTATGGATTTCAAGGATTTTA 90808 28 100.0 32 ............................ CACCTGATGCAAAGGCTGAATGCCTTTGCCGA 90748 28 100.0 32 ............................ TGCATGAATGGAGGTCATACTCCCTTCATGAC 90688 28 100.0 32 ............................ TTTTTATCTGTGCTCCTGGAATAGCTATTCCA 90628 28 100.0 32 ............................ GTAATATCTAACGGGATAAACGGGTGGCTTTC 90568 28 100.0 32 ............................ TTCCGCTGCGGTGCCGATGTAGTTAATGTTGT 90508 28 96.4 32 ........................T... AGTCACGGCCGTCATCTGATATCAGAAATGAC 90448 28 100.0 32 ............................ GCTACAGGATGCTGTTGATTTAGAAATAGCTA 90388 28 100.0 32 ............................ GTCTAATAAAATTTCAACAGACAGGATATTCA 90328 28 100.0 32 ............................ GCTGGTGGCAAGAAAAGACCAGACAGGCGCAA 90268 28 96.4 32 ............T............... GTTTCCTGTCCATCTTGTTCAAAGGGCGGGGG 90208 28 100.0 32 ............................ TGCGGGGCCGGTTGTCAGATACCGTCCACGTA 90148 28 100.0 32 ............................ AATCACCGGCCACCGTCACCCGCTGTGAAACA 90088 28 100.0 32 ............................ TTTTACGGCCCCGCAGGGCAGCAATACGCGAC 90028 28 100.0 32 ............................ TTCTCCCAAACCAAGGTTATCGAGAACCTTCT 89968 28 100.0 32 ............................ GGTTGGACCGGGCGTAAACTCATCAACGTCTG 89908 28 100.0 32 ............................ AATCAAAAATGCGCCAGTCGAATCAACTGTTG 89848 28 100.0 32 ............................ CGTAACGCTATTATCATCTCCTGCAATAACAT 89788 28 100.0 32 ............................ AAAAACCTGCGACGCATTAGAATCTACAAGAG 89728 28 100.0 31 ............................ AGCGACCTACCGCTTGAAGGCGGATGCTCTA 89669 28 85.7 32 ...........C..........C...GG ATTGCATCATTTGCTTTCTTGTGTCCATATAG 89609 28 96.4 32 ...T........................ TGCTGAACTTGCACCAGCGACCTAACGATCAG 89549 28 85.7 0 ......................A..GCG | ========== ====== ====== ====== ============================ ================================ ================== 25 28 98.4 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CCGGTCGCGCCATCGCTTCTGACTGTGCAGACGGTATCACCAAGCTGATTTTTGACAAGGAAAGCCATCGGGTTATCGGTGGGGCGATCGTCGGTAGCAACGGCGGCGAGCTTCTTGGTGAAATCGGCCTGGCTATTGAGATGGGCTGTGACGCGGAAGATATCGCGCTGACTATTCATGCCCACCCGACGCTGCATGAATCTGTTGGCCTGGCGGCCGAGCTGTTTGAAGGCAGCATCACCGACCTGCCGAATCCCAAAGCGAAGAAAAAATAAGCCCATTCTGCTGACGAAGGCGGCTCCCGGATGGGGGCCGTTTTTTTTATGCCGCGTGACCGGGTCCCGGCGTCAGTCAGTGCGATTACTGGCATACCCTTTTTTTAAAGGCATTGCTAACACATTGATTTTATTAAGTCGTTCATTCGGGTAATAAAAAAGGGTTTGAGCGTAAAATTCACAGAAAATACTTTGCCGTCATTGTCTTAGCCGCTTATGATTCTT # Right flank : GTTTGCCAAGCCATTGCAGTACACGGATTAAACCGCCTGATTTATCTTTCCGCCGGTTTTTTCAGGCGTACCGCCCCTTTTTTGCGAGCGCCCTCGACGGGCTGTTAAAAAATCCAGATAAACGATGAGTCCCAGCGGTTAATTGGGTAGCCTGAACCGAAATCTACATCTCAGCGGGAGATTCGGTGACGGTGATAAAAAAGAGATATATTTTGCATTGCACCACCCGGCGCGTCAGGTTGCAAAAGGCTGTGTCAGAGCTGGCTGCGTTTTGCCGCCAGCCAGGGTCGATATTTCCCGCACTCTGCCGCAGAGCCGCTGACCTTTGTGCTTTGCACCACCGGCCAGTGAAAGGCTGGTCGCTTCTGGCGCTGAATCTCTTGCTGATAGTCATGCCCGTGCAGGCGGATATCCGTGGCAACGTGGTTTGGGTTTTCGACGGCGATACGGTGGCGATCTCTGACGGCCGCCAGCAGCGGCGCGTGCGACTGATCGGGATT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //