Array 1 151612-148904 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJAD01000004.1 Klebsiella pneumoniae strain EuSCAPE_LU012, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 151611 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 151552 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 151491 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 151430 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 151369 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 151308 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 151247 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 151186 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 151125 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 151064 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 151003 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 150942 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 150881 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 150820 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 150759 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 150698 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 150637 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 150576 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 150515 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 150454 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 150393 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 150332 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 150271 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 150210 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 150149 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 150088 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 150027 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 149966 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 149905 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 149844 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 149783 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 149722 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 149661 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 149600 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 149539 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 149478 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 149417 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 149356 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 149295 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 149234 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 149173 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 149112 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 149051 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 148990 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 148932 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //