Array 1 35698-33927 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAEW01000005.1 Peptoniphilus rhinitidis 1-13 strain 42017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 35697 32 100.0 34 ................................ GAATCCTCAAATCTTAACTTTGCAAGTATGCAAA 35631 32 100.0 34 ................................ AACTATTCCTCACCAAATTCTTCCCAACGAACTT 35565 32 100.0 36 ................................ ACGACTTTAGTCTCCGCCTTAGGTTTTGGTGCGATC 35497 32 100.0 35 ................................ TTTTATAAGGTTCTAACCAATGCAGAATGTACTTC 35430 32 100.0 35 ................................ TAACTTTGATGCCTTTTTGATTTTTGCTGACTTAG 35363 32 100.0 35 ................................ TAAGGGACGATTAAGTCCAGAGCAAAAAGAATTTT 35296 32 100.0 34 ................................ GTTATTGGTATTAGGTCTTCAATGATGCCATCAG 35230 32 100.0 35 ................................ CAGCACCATCAGGACATGTTCCATGCAAGGTACAC 35163 32 100.0 35 ................................ TTGGCCCCTCTGAATAAAGCGAAAGAAGTTGCAGG 35096 32 100.0 34 ................................ ATAATTACTCGCTTTTACATAATGCTTTTGATGA 35030 32 100.0 36 ................................ AATTTATTTAATACATACTCAAAATTTCCATCCCAG 34962 32 100.0 34 ................................ CTTAACCTTAAAGACACCAGTAGTAACATTCCAG 34896 32 100.0 35 ................................ GCTGATATAAGCTGTATGACCACATAAAGTGTTAG 34829 32 100.0 34 ................................ ATTTGACCCAAGTCCCGAAATAGAGGTTTTACCC 34763 32 100.0 35 ................................ AAAGATAGTGGTCGTGTGACTGTTAAGATGACAGA 34696 32 100.0 35 ................................ TCAATGACTATATGCAAGGAATGTCCTTATCTGAT 34629 32 100.0 34 ................................ ACTAATAAGACAATTTGAATAACTAACAGGATAA 34563 32 100.0 36 ................................ CTTTAACTTCATTCCATTTGCTTGTTATTCCTTCTG 34495 32 100.0 35 ................................ ATTACTGTTAAAATAAACTATTCTCTTGATGGTGA 34428 32 100.0 36 ................................ TATAGATGTAGCAGTCCATTTCGTTTTGGACTTCTA 34360 32 100.0 36 ................................ GGTAAATCGTAAAAATGAACTTGCTGATTGATGGAG 34292 32 100.0 35 ................................ GATTTTTAAATCACAAAACATGCCTCAAAAAATGG 34225 32 100.0 34 ................................ TTGTCTATTGCCCTGCTTAGATACCTGGACCACA 34159 32 93.8 34 ................A.C............. ATAAGTTTTATTTTGTAAGTTTTGCCACCTATGT 34093 32 100.0 35 ................................ ATTATTTACAATATTTCTTCTAATATAAATTTTAA 34026 32 100.0 36 ................................ GATAGGCTAAGTGGTTTTCTTTCGTAAAGCATAGCC 33958 32 96.9 0 .......................A........ | ========== ====== ====== ====== ================================ ==================================== ================== 27 32 99.7 35 GTCGCACCCTTTATGGGTGCGTGGATTGAAAT # Left flank : TACAGGCGCAACTTTTAAATTCATACATAAGAGGAGATATAGAATCTTATCCACCATTTATGATAGGAGGATAAAATGCAAGTATTAATAACATATGACGTAGAAACAATAACATCTGAAGGAAAAAAAAGACTTAGGCAAGTATCAAAAGTATGTGTTGATTATGGGCAAAGAGTACAAAATTCAGTATTTGAATTAAATATTTATCAAGCAGATTTATTAGAAATAAAAAACAAACTTATAAAAATAATTGATCCGCAAAAAGATTCAATAAGAATTTATAATTTAGGGAAAAATTGGGAGAGAAGAGTAGAAACATTAGGAAAAGATGATTCCTATAATCCAGAAAAAGATTTACTTATGTTATAATGGATATGAGAATTAGAGTTAAACATAAAAACATATAAACTAACTCACAAAGAATAGTAAAAAAGAGACAAAACTCTAAAAAAATGATTAGCTGTATTTTTTTTAATTGATGAAAATGTCTAAAAAATGCA # Right flank : AAAAGTTTAAAATACAAATGATGCTTTTAGGTAGAGTTAATTTTTGATTTGCTCAACTGTAAAAGCATTTTTTATTTGAATTTATTAAAAAGTTAATTATACTTTAACAAATGTGTAGTCTTAATAGCTTTGTAGTATAATAAAAATAGCGTGCTATGAGATTTTTTGTAAAAACTTGTAGAAATTTATTTTATTTATTATAATACTTTTATTATGGAGGTAATATGAGATTATCAAAACTTTATATGCCAACTTTAAGGGAAGATCCTCAAGATGCAGAGATTGCATCTCACAAGTTTCTTTTAAGAGCTGGTATGATTAGAAAATCTGCTAGTGGTATTTATACATATTTGCCACTTGGTTATAGATCTATTAGAAAAATTGAAAATATTGTGCGTGAAGAGATGGATAATGCAGGGGCTATGGAAATTTTAATGTCTGCTATCCAACCTTCTGAAATTTGGAAAGAGTCTGGAAGATGGGAAAAGTTTGGACCAGAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTTATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //