Array 1 845531-844039 **** Predicted by CRISPRDetect 2.4 *** >NZ_NBMX01000001.1 Gardnerella sp. DNF01162 Contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 845530 28 100.0 33 ............................ TCAAAGTGCTAGACGAACAGTCACAGAAAGACA 845469 28 100.0 33 ............................ TGCAAAGGATGCAAAGCACACAAAGGATTATGC 845408 28 100.0 33 ............................ CCAACAAAGGGGACGGCACCAACACCGTCCCCT 845347 28 100.0 33 ............................ CGCTTTGTGTTTCATGCGCGCATTATGCAAAAG 845286 28 100.0 33 ............................ TGTAGCTGAGTACACCAATTGGGTTGAAAGCTG 845225 28 100.0 33 ............................ TTAAAGAGTTTTCCAAACCACGAACAGACAGCA 845164 28 100.0 33 ............................ CAGTCTCCTAGTCCGCAAACCAAACAAAAACAA 845103 28 100.0 33 ............................ CGATATTCGAGGTTCCTGGGCACGCGTTAAACA 845042 28 100.0 33 ............................ CAAGCAGTAAACAACATGCACATGCCAATAGTA 844981 28 100.0 33 ............................ TGGGTACCGGTTAATTTTGGCTTTAGAAATGGC 844920 28 100.0 33 ............................ TTTATGGACATATGCACCCTTGTTGCGAGAATG 844859 28 100.0 33 ............................ CATGATTAACCGTGTGCAAGGTCAAACAGCAAC 844798 28 100.0 33 ............................ TGTTATTTCCCTTAAAAGATCCGTAAGTTTCAG 844737 28 100.0 33 ............................ TTTCTGTATCAACATCATTATACTGTTTTAATT 844676 28 100.0 33 ............................ TAGTCCCACAACCACAACGGTTCACCCCAAACA 844615 28 100.0 33 ............................ CTTTTCTATTACATTATGTAGAAGATAAAGAGT 844554 28 100.0 33 ............................ TAGCCTTTGCTTCAGGCGCGCACACTTTAGTAG 844493 28 100.0 33 ............................ CAAAACGCAAGTGTTTTTTTAAGTAATCGCGTA 844432 28 100.0 33 ............................ CATCTTCTACAAAATAGCAATATTTGTAAATTC 844371 28 100.0 33 ............................ TGGAAAAATATTAACACCACTGATATTAGAAAA 844310 28 100.0 33 ............................ CAATGTCACCTTTTTTCACACCTTGCAAACGAT 844249 28 100.0 33 ............................ CACCGGCTCGATGTGGGGTGAACTCACAGCCGC 844188 28 100.0 33 ............................ TAATATTGCGAACACTACTAAAAATAACGCTAG 844127 28 100.0 33 ............................ TAAACATTGCGTGCGATGAGAAGTAGCGTATCA 844066 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 25 28 100.0 33 GTCTTTCCCGCATACGCGGGGGTGATCC # Left flank : ATAATTCCCAATGAAATTACCGAGTTAACTGGTATTACGTGCGACATGCTTGAGTCTAATGGCGTAAGTTTAGACTTAGCATTAAAAGAATTTATCGATTTTATAGGGAAATTACCACTATTAGGATATAACGTATCGTTTGATATTGGTTTTTTTAATTCGGCTTTATTCTCATTAGGTGAGAAGTTCAGCAGCGCTTTTTCTATTAATAAAGTTATTGATATTTCACGTTTTGTGAAGCATGATAGGAGATTTTTGAAAAATTATCAGTTGAAGACGGTTCTTCAGGAGTACAACATTTCTGAGTCAGTTCCTCATAGAGCTCTCATAGATGCTAGGCTAACGGCGCGTCTTGTTTTTCACTTGAAAGGATTGTTAAAATTTATTTCATAAAAATAAAGCACTATTGTACTACTCTATGTGATAGTTTGAATTTGAAAAGTAAATGAGATTTGACTGTTTCTGTTATAGAAATGGCCATTTTATTAGGATTTTTAAGT # Right flank : TAATCCTTGGTGTTGGACATCGCACGCGCTAAAACAATGGCAAGATACAGTAAATAAAAGCATCGAAGAGTACAATAAGAAGAGCATCAATAAACAGAAAGAAAGGAACAGCTCATGATGGGCACAATAATGGTAATCAGCATAATACTATTCATTGCAATGTTGATATTTGGATTTGCGGCTTGGATCTATGACTTGCTCCATTGCAAACCACACAGTGAACTCGGGCAACGTATCCTACGACTCGATGAAAACAATAATCCAATTGAAGATAAGAAAAAATAGTAAAGGAAACGAATGCACGATAGTAGCGTCTTTCCCGCATACGCGGGGGTGATCCTCACTGTTTACTTCTGCTAGTAGAGTACACAAGGTCTTTCCCGCATACGCGGGGGTGATCCCCTACACATGCAGCAAGTGCGGTTGCAGTAGTAGTCTTTCCCACATACGCGGGGTGATATCAACACCATAAGGGTTTTTATTAAAAAATTTCATTTCTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTTCCCGCATACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.80,-9.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //