Array 1 229630-227770 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJHD010000002.1 Klebsiella pneumoniae strain MS14393 NODE_2_length_807820_cov_142.977, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 229629 29 100.0 32 ............................. ATTCAGCGAAACAAGAAGAACGGCGTAGGCGA 229568 29 100.0 32 ............................. TGACAGAGAGATTGACCGTCTTGTTTTGAATG 229507 29 100.0 32 ............................. GTGCCGAGTCGCCCGACACCGGCGATCATGCC 229446 29 100.0 32 ............................. CCCTGTGTCAGTCGAGGATGTTCATTCGCCCA 229385 29 100.0 32 ............................. TCCGGGGTGAGCGGGAAATTTTTTTCGGTCTA 229324 29 100.0 32 ............................. GGCGAACTAATGACGACGCTCAAGAGCGGGGC 229263 29 100.0 32 ............................. CCCGGGGTTAGCCTCGAGCGTGGCCGCGATCG 229202 29 100.0 32 ............................. GCCATGATGGGAGATGAGCTATGAAAAGGGAT 229141 29 100.0 33 ............................. GTACCCTAAACGAATATCTCACCTCGTTTCGGC 229079 29 100.0 32 ............................. TTTGAAAATAACGCGCTAAGTCCGGCAAGACC 229018 29 100.0 32 ............................. GCAGCGATACGCCGCCATCCGTGTTTATTTCT 228957 29 100.0 32 ............................. CCAGCGGATATGCTCCACGACATGATCAGCGC 228896 29 100.0 32 ............................. TTTTGCGAAATAGTTGGAGGGAGATACATTTT 228835 29 100.0 32 ............................. GTAATCCCCGCGTTCTGGCATCCGCTCACTTA 228774 29 100.0 32 ............................. CAACCAGTTCCTTGACCATAGCCCCTGATGCG 228713 29 100.0 32 ............................. GTGTAGAAACTATTGAGCTATCAAATGGCACT 228652 29 100.0 32 ............................. CGCTTCAGGGAGAAGAAACTTCCTTCGGCGCC 228591 29 100.0 32 ............................. ATAAGGCCTGGCTTTAACTCAACGGAGCACGG 228530 29 100.0 32 ............................. GGCAGCGCCTCGACTGCACTGCCGATTTTGAG 228469 29 100.0 32 ............................. CGTCTGGCCATAGCCAACTGCCAAAACGGGCC 228408 29 100.0 32 ............................. CCAGGGTGAAAACCAAAGTCGCCGCCGACCAG 228347 29 100.0 32 ............................. GACAATCCTGTTTTCTCCCTGCGAACTATCAA 228286 29 100.0 32 ............................. GATCTCGATGAGGAGATTCAGATTCAGTGTAT 228225 29 100.0 32 ............................. CACTCAGACCTGCGTCGAGACGATCGGAGACA 228164 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 228103 29 96.6 32 ..................A.......... GCGGCGTCAGGTGTGTGGCAGAAAATTATTGG 228042 29 96.6 32 .......T..................... TCTGACTGTCGAGGCATGATCTGCCCTCCGAT 227981 29 93.1 32 A..................T......... TGCGTCACGACGCCGGCGACAGTGACATCGTC 227920 29 100.0 32 ............................. ACGGCCCGACAGAACGGCGCTGGAATCTCTCG 227859 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 227798 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 31 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAAATTGTTGTGATAAAGTTGGTGAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCTTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //