Array 1 28694-23883 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJVZ01000007.1 Flavobacterium sp. ZT4R6 1.11919_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 28693 47 91.5 30 A...C.G..........G............................. TGAACCGTTTTCCATCGTTGCAATGGCTTT 28616 47 93.6 30 ...............T.........................AT.... GATAACCTTGTAGAAAAACTTGTAATACTT 28539 46 95.7 30 ................-........T..................... GACATGGAAACACCAAAACAAGAAGCTATT 28463 47 100.0 30 ............................................... TCAAAAAGAGAAATGGTTGAGCGCCGCCTT 28386 47 100.0 30 ............................................... ATAAATTGAAGCTGGGTTTTTAGCTCCTTT 28309 47 100.0 30 ............................................... AAGTGCCACCTTAAGCCTACTTGGAATCCA 28232 47 100.0 30 ............................................... AGTTGTGGGCGGGTGGCTTTCATGTCGGCA 28155 47 100.0 30 ............................................... AATTCTTCAAGTGATCTGAATACCCAAACT 28078 47 100.0 30 ............................................... ACATGCTTGGCCCACATTTTGGCAGTACCC 28001 47 97.9 30 .....T......................................... CTATGGTGGCGGTTATGCAAACCCTGTGGG 27924 47 100.0 30 ............................................... GCGAAAATGTTTTTTATAGACGTTTTCCAA 27847 47 100.0 31 ............................................... CGGGGGGGGGGAGTCGGGTGAAGCGCGGAAG 27769 47 100.0 30 ............................................... GCAGCCTGGGGTAAGAACAATGACTACCCT 27692 47 100.0 30 ............................................... GATAGAGGCGGCATCCTTTTTGTTTTTCAC 27615 47 100.0 30 ............................................... AGGGCTATACCGCCTTTAGTGTTCACTACC 27538 47 100.0 30 ............................................... TAGCGGAATTAAAAGCCGAGCCAAGCACTA 27461 47 100.0 30 ............................................... ATAAACGATACTATTTAATGAGGTCAGTTC 27384 47 100.0 30 ............................................... CTGTAGTTTTATACTTGTCGTAGGCATCTT 27307 47 100.0 30 ............................................... TGAAAGGATCAAAGAACTTGAAGCCCTGGA 27230 47 100.0 30 ............................................... TTGAAGAACGTGAAGCTGCTGATGATCGTG 27153 47 100.0 30 ............................................... CTGCTGTTTTTACTGCTGATTCATTAGTTG 27076 47 100.0 30 ............................................... CCTGCAATAATACATACTATACCGCCGATC 26999 47 100.0 30 ............................................... CAATGTGCATGGCTTTTGGCATACAGACAC 26922 47 100.0 30 ............................................... AAAGTGACGGTAAAGTTGTTGTTAATGCTA 26845 47 100.0 30 ............................................... AGAAGAAGATCATGACGATTTGCCTTTTTG 26768 47 100.0 30 ............................................... GTATGACTTTTGATTCGTCCGAAGTCGGTG 26691 47 100.0 30 ............................................... CCCCTGCCGACTAACCCTTCCAGCTTTTCA 26614 47 100.0 30 ............................................... GCCCCATCAGCCATGTTTGAAACTCTTTTC 26537 47 100.0 30 ............................................... TTCAGGAGCTGCTTATATTGTTAGGGTTAA 26460 47 100.0 30 ............................................... TGTAGCGTATACAATGTCATTATCCATTCC 26383 47 100.0 30 ............................................... AGGTAATATCAAATGCGCAAGCAGAAACAT 26306 47 100.0 29 ............................................... CTTCACGATAGATACGTTAAACCTTGCAA 26230 47 100.0 30 ............................................... AAACCAAATGATAATATGAATACACTGAGT 26153 47 100.0 29 ............................................... TCGCTTAAAAATAGGTTTGTATCTATTTT 26077 47 100.0 30 ............................................... AAGAGGTTTATAAGCGTGAAATAGAATTAA 26000 47 100.0 29 ............................................... CGAAGCACTCAAAGATTTATACGATGCTG 25924 47 100.0 30 ............................................... TAGCCAGTTAGAAGATGCTATCACTTACAT 25847 47 100.0 30 ............................................... GCTTTTTCAAAGCTCCCGCCCGCTACCCTT 25770 47 100.0 30 ............................................... GCCGAAATGGTTATTACCGATGCTGCCGGT 25693 47 100.0 30 ............................................... GCTAACCACCCTCCTACTCCAGAAGAACAT 25616 47 100.0 30 ............................................... TATGTTTTATCCACCCCGTTAAGCGTATAA 25539 47 100.0 29 ............................................... TGCTTACGGAGGTTTCGGCATGGGCTACA 25463 47 100.0 29 ............................................... ATCAAAGTTTGGTCTTATAATGACTGAAC 25387 47 100.0 30 ............................................... CTGAAAGTTCAATTTATGGAAGGTAAAGGA 25310 47 100.0 29 ............................................... TATAAGCTTTAATATGGATTGCTCGTTAT 25234 47 100.0 29 ............................................... TCATTCGAGGGATTATGTTAAGGCTAACG 25158 47 100.0 30 ............................................... TAAAGCCAATGCATCATTTGCCGTAACTGA 25081 47 100.0 30 ............................................... ATTAACCAAACCAATTATTGTATTTGACCT 25004 47 100.0 29 ............................................... TGGATGACCCAACAATGTCCACGAGAAGC 24928 47 100.0 30 ............................................... CGGCGCGCCTCTATCTTTTAAGTTGTTTAT 24851 47 100.0 30 ............................................... AGAGTTAAGCAAAGAAAATCAGGAACTACT 24774 47 100.0 30 ............................................... TTATGGGAAAGAATTTGCAAGGCGCAAACC 24697 47 100.0 30 ............................................... GTACATCAAAAATACCTTTAAGGTCTTTAC 24620 47 100.0 30 ............................................... TTTTTAGGCGTTTTAAGGGGTGCAAAATAA 24543 47 100.0 30 ............................................... GACCGTCTATTGCCTGTGTGTACTCTATAG 24466 47 100.0 30 ............................................... GCTTTGATTACAACAGCCGTGCCTGGCGTA 24389 47 100.0 29 ............................................... GCGCCGTTTTCCATCGTTGCAATGGATTT 24313 47 100.0 30 ............................................... AGGGGGTGTTATACATATCGAAATAGGCTT 24236 47 100.0 30 ............................................... TTGGTTACGCTTGTAACGCAAAGCATTGCC 24159 47 100.0 30 ............................................... ATTAAAGGCAGGCTGTTTTATCCTTTTTTC 24082 47 100.0 29 ............................................... CTGTATATCTAAAACTAAAGGGAGCTTTT 24006 47 100.0 30 ............................................... AAGGGAGAAACTTTCTTTAAACATGTTTAC 23929 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 63 47 99.7 30 GTTGTGAATTGCTTTCAAAATTGTACTTTTAGCTTATAATTCCCAGC # Left flank : ATGTATTTAGGGAAAGCTTTATAGTGATGGCTGTGCATGCCAAATTACCTATAAATTATGATGAGTTATTACAACAAAAAAAACCATCCGGTTATGGATGGTTTTAAGCTGTTTTGTGACCACATCAGGATTCGAACCTGAGACCGCCTGCTTAGAAGGCAGGTGCTCTATCCAGCTGAGCTATGTGGCCTTTTAGATCACTTTACATGATTTTTATTTGTCGCCCTGCCTGTACAATTTTCGAACTTTTTCATCGAAGATTTGCAACGATTGGCAACGCTTAATTCTTAAGGTTGCGCAAATGTATAACAAAAAATTTTAATAGACCAATTGTGTGCCTGATGAATTTTATCCTAAATTTTCAGGCACATCTATGTACTTATTGATATGCTGATTTAAATAACTGGATGTCAATAATGAAGCTTTTGACTGCTCCGAAACAGAGACTGAAAAAATATTTAATACGTTAAGTTCTTAGCCCGAATGATAGGTCTATTACT # Right flank : TATCCTTACGTAAAGCGTTGATATGCTGGTATTTATAGGTTAATTTAGGAATAAAAAAACAGATTTTTTTTGCTATATCAATATGCTTCATTATAGATTTTTATGATTCTATAAGATTAGAATAGCTCCAATTGTTGTGAAGGTTTATCGGGCTCTACGGGCTTTTGTCCATAAAATAATTCCATCATCCCGAATTGCCGATCAGTAATTTGCATGACACCTACTTTTCCATGCATTGGCAGGCTGTTCTTTACTCTTTTGGTATGCACTTCTGCATTTTCACGGCTGGCACAAAAGCGCATATAGATAGAAAATTGGAACATAGAGAAGCCATCATCCAACAATTTCTTGCGGAAAGTAGCTGCTATTTTACGTTCCTTGCGCGTTTCGGTCGGCAAATCAAAAAAGACTAATATCCACAAACTTCTATATTGGTTTAAACGGGTGTAATGATCATCATACATAGACCGGGTATAAGATTTTCCTTGCGGTTCCTTCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTACTTTTAGCTTATAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.80,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //