Array 1 1135443-1136632 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058180.1 Klebsiella grimontii strain RHBSTW-00039 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1135443 29 100.0 32 ............................. CTGCCACCCATTCGTTAACCAGCCAGACACCC 1135504 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 1135565 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 1135626 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 1135688 29 96.6 32 ...........................T. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 1135749 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 1135810 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 1135871 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 1135932 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 1135993 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 1136054 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 1136115 29 100.0 32 ............................. CCTATAACCGACGAAGGCAAGCGCCGCGCACG 1136176 29 100.0 32 ............................. CCAGTTAGCCGCACTCTTTAATTGATCTGCGC 1136237 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 1136298 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 1136359 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 1136420 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 1136481 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 1136542 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 1136604 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 20 29 98.8 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1895340-1896160 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058180.1 Klebsiella grimontii strain RHBSTW-00039 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1895340 29 100.0 32 ............................. TCAGTAGTGCGATAGCGCCACGCTACCGGCTC 1895401 29 100.0 32 ............................. GTTCCTGCCGTCTGTAGGCAGCGCTAAACTCT 1895462 29 100.0 32 ............................. TTACCTTTGTCGCTTTTACAGAGGCAATGGAC 1895523 29 100.0 32 ............................. CCGGTATCGCATCGTTTTGCTTTTACAACCTG 1895584 29 100.0 32 ............................. TCAACCCGAGAATCTGCGAGTTAGTGGCGCCA 1895645 29 100.0 32 ............................. GGATGCCTGCCGCGCCGCCATGCTGCAGGAAC 1895706 29 100.0 32 ............................. GACGCCGAACCAGAGGAGGATGAGCCAGAGGA 1895767 29 100.0 32 ............................. TACAACATGCTGGCGCAGCGGCATACCATCAG 1895828 29 100.0 32 ............................. CAACCTGTGTGCGCATAGCCTTGATCGCTTTC 1895889 29 100.0 32 ............................. CGTAACGCAAATTCAGGCAGATTATTTAACCC 1895950 28 96.6 32 .............-............... ATTGATCGCGCTTTCTCGCGCATCTCAGAAGA 1896010 29 96.6 32 ...............A............. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 1896071 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 1896132 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 14 29 98.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCCTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //