Array 1 1479545-1479313 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017694.1 Geobacillus thermodenitrificans strain KCTC3902 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1479544 30 100.0 38 .............................. TTCTCATCGGGCTCGCCTATGCGGAAAATCGTGGGTGG 1479476 30 100.0 37 .............................. TTTTATTGTGTATAACGAATTGTAAAACCGTTCTCCG 1479409 30 96.7 37 .....................A........ ATCCGAGCCACACGAATTTCGATGTTATGGCCGGCTT 1479342 30 93.3 0 ....T............A............ | ========== ====== ====== ====== ============================== ====================================== ================== 4 30 97.5 38 GTTTGTATCGTACCTATGAGGGATTGAAAC # Left flank : GAACCAACAACGGGACTTGACGAGACGAGGCAGCGGCGGTTGTTCGGACTGTTCGAGACGTATTTGTGATTATTTGAGGAAGAGGAGCGCCAATTACGAAACGAGGTGAACCAATGGAGACGAAGGAAGCGAAACAAGGAATGGAGTGGATCACCTCGTACGAGCGGCAAGGAATCGAGAAAGGAAAGGTGGACATCGCGAAACGGATGGTGGCGAAATGATGCGACGTGACGGCGATGGGTGAGCTGCTCGGATTGCTGATGGAAGTAGTGGAAAACAGCAAAAGGAAAAGGCTCATGTGAGGGCTCGAGGAAGCAAGAAGCGAACTTCGTTTGTCGTCGACCTCCAATCGTGCAAAAATCCCAGGGGGTCGACGACACTTATTTTTGTTGCTGATTCCCTACAGCCATCATGGACGAACATGATTGACGGAATTTTTCGACCGTGTTATTCTGAAGGTAACATGGGATGAAAAAGCTTGATATAACAGCACTTTTTGG # Right flank : GATACTGTAAGAGTATACAGTTTATCGCCATGCATTGATTGACGAAGTGGTGGCGGAAATCCGTCGGCTAAACGAAGAAAACTTCCGCGTACGCCAACATATCCCATATGTACACAAGTTCCAAAACCGGGAAGCATGGAACTGTTTAACGGCGATGGATGTCAATGAAATCAAAGAACATATTGCACCGCTCATTGTTCCGCTCAACGATGATGAACTGGCCAAGCGCTTTGATTTGCTGATGTATACAGTTGAGTTGGCGAAGTTGCAAACAAAAAATGCGACGAAGCCAATTCGGAGCATGATTCGCACCACAGAAGCGTTATCTAAGCTCGGATCGATTCCGCAAGTGCAGGAACAAAAATGCATCATCGAAAAGGTGTAGACGGAAGAGTTTTGGAGCGAAGCCGATAGTTTTGAATTGGAAGCTGTTCGCGAAGCGTTGCGCGATTTAGTGAAATTCCTTGAAAAAGAAACGCAAAAAATTTACTATACGAACT # Questionable array : NO Score: 8.74 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1508828-1508399 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017694.1 Geobacillus thermodenitrificans strain KCTC3902 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1508827 30 100.0 35 .............................. TCAGCTATCTTGCATATTCGTTGAACAGAACAAAA 1508762 30 100.0 40 .............................. TGGATTTCGAGGAATTGCGAAACCACTTGATGGAGCTAGG 1508692 30 100.0 35 .............................. TACCAAACAAACCATGCTTTTTTCTCTTCATTGTC 1508627 30 100.0 37 .............................. AAAATTTATTAACTGGAAGAACGAAGCGGTTAGCAGA 1508560 30 100.0 35 .............................. TTACGACGAGTACACATATGACCCGAACGCCGGGG 1508495 30 93.3 37 .....................A..G..... CCCTCACCGAGTCCGCGCATTTTTTCTCCTAAACCCC 1508428 30 93.3 0 .....................A..G..... | ========== ====== ====== ====== ============================== ======================================== ================== 7 30 98.1 37 GTTTGTATCGTACCTATGAGGGATTGAAAC # Left flank : TGAGACGATCGATAGAAGAAAGAAAACTCATTTTTTCGGGCCGGATGATGAGGTATTTCCCCATCTCATTGAGCTGAATTTTCGCCATAAATATCAAGCGTACTATGGTGTCCCGCCGGTGGAGAGATTGTCAATTCAACCCGTTCATGTCCACCAACGCCATCGCGTTGTGACACTATTCAAAGATATGTATATTACAGGGTGGTTGGGGCATTACCGTCTCTCCTCTTCTCCCGAGCAGTTGACGTTTTTATACCACGTTGGCCTGGGCAGCCGAAATTCCCAAGGGTTCGGCATGTTCTGCCTAACGGGTAAATAATTCGATTCCTCTATTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTTGTTTTTGTCACTTGGCTCCTACAGCTATCACGGGTGAGTGTGATTGACAGAATTTTTTGACCGTGTTATTCTGAAGGTAACATGGGATGAAAAAGCTTGATATAACAGTACTTTTTGG # Right flank : TTTATCGATTTTGGAGATGGAGCATATCATGTCATCATCAATTTATAAAACACTCTTGTTGTGGTTTTTTATTTTGCGAAAACATCAAATGAAACTTTCGTGGAGAGTGGAATGAAAGAAAGAATTTTATGTTAAAGGATGATGATGTATGAATAATAGAATACAACAATTCTGGAATGATTTTTGTAAGGCAACTGGTCAGGAGGGGATTGAATATAAAGATGCCTTTCAGTTTGGAGCTTTTCCTGATCGGTTGGCTGATTTAGTTGTTAAAGGAAAGAAAACAGCGACAACTTCAGGCTACGTGTTTTATGAGTTAGAAAAAGAACCTATCCCTAAAGCTGGTGAATATTATATTGTTTTGGATGGTCAGGGAGAGCCAGTCGCAGTCATTCAAATTCAATCCGTTGAAATTGTTCCGATGAATGAGGTGACAGAGGAATTTGCTTTAGCGGAAGGCGAAGGAGATTATCGTTCTTGGTGGGATGCACACGAAAAAT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : GTTTGTATCGTACCTATGAGGAATGGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //