Array 1 58238-56866 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLLN01000016.1 Geobacter argillaceus strain ATCC BAA-1139 Ga0052872_scaffold00016.16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 58237 29 100.0 32 ............................. AAGGAGGCCGTCGCAGAAAAGGACGAAAGCCC 58176 29 100.0 32 ............................. TCGAATACAAGAGCTACGTCAGCGGGGAAAAC 58115 29 100.0 32 ............................. TTGGCGCGGTAAAGTAGCTACGTGGGCGGTCC 58054 29 100.0 32 ............................. TCGCCAGCTTGGAGGAGCGGAAAACCCCTACC 57993 29 96.6 32 ............................T TATCCACAGGCAATCCGGCCGGCTTAGAGCCT 57932 29 100.0 32 ............................. CAGCTTGGCATTCCGGTGGCGGCGGTCGATGC 57871 29 100.0 32 ............................. TCGTCGGACCTGATCGGCATTACGCCCGTGAT 57810 29 96.6 32 ............................T TGCTTGCCCGCCCCGTTGTATCTCGCCACCGC 57749 29 100.0 32 ............................. ACCCGTGGGGCGTGGCATGACTTTTTCTGGAA 57688 29 100.0 32 ............................. TGGCCGAAGACAAGGATATACGTTTGAGTGGT 57627 29 100.0 32 ............................. TGTCAGCAGGGTTGACCGTTGATAGCCGCTCC 57566 29 100.0 32 ............................. TAGCCGGTCCGATCCCACTTGTCACGGTAGAG 57505 29 100.0 32 ............................. TAACTGGAATCGTTACTTCTTGGAAGTAATAA 57444 29 100.0 32 ............................. TCGGCGCGGTAAAGTATGCCCGCGGGCGGTCC 57383 29 100.0 32 ............................. AAACATGTGCAAAATGCGAAGATTGAATTTAA 57322 29 100.0 32 ............................. CATTATCAATTGGAGTATGCAGCCGATGAGAT 57261 29 100.0 32 ............................. TGGTAACGGTGCTCCGCTGATGGAGAAGGCTG 57200 29 100.0 32 ............................. ACACCAGCGAGATGCCGCATATCGAGTATCCG 57139 29 100.0 32 ............................. GTGTCAGCCTGTTTCTTGAGGAATTTATCAAC 57078 29 100.0 33 ............................. GAGCATGTGAGTGTGCTGGACGGGCGTGGGAAA 57016 29 96.6 32 ..........T.................. ATTACGGTATGGCGGACGAGCGATATTGAGGC 56955 29 100.0 32 ............................. GGCAGGGAACGCTTGCCGGTGCGAAAGAGCGA 56894 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 23 29 99.6 32 CTGTTCCCCGCATCCGCGGGGATGAACCG # Left flank : CAAGATCATACCGACAATAGAAGAAGTGCTTGCCGCCGGAGGAGTGGAGAGGCTCGAGGCCCATGAGGAAGCAGTGGAGATAGCCATACCGAACAAGGAGGGGATTGGCGATGTTGGTCATCGTGGTTGAGAACGTGCCGCCTCGTCTGCGTGGGCGTCTTGGGTTGTGGTTGGTGGAGGTGCGGGCCGGGGTGTATGTGGGGGATGTCTCGCGGCGGGTGCGGGAGATGATCTGGGACAATCTGGAAAAGGGGATAGATGACGGTAATGCGGTCATGGCCTGGACGTCGAATAACGAGTCGGGGTTCGATTTTCTTACCTTGGGGCAAAACCGGAGGATTCCGGTTGAGATGGACGGGATAAAGCTGGTATCGTTCCTGCCGGAAAACGGCAAATGTGTGGATGATGACGTGCCGGTAAGCGGTACGAAATAAGGGTGAAAATTCGGTAGAATTTGGGACTTTGAAAATTGAATGAATTTTCAAAGAGATAGAAGAAGT # Right flank : GCGTTGAAGTCGTCCAGCCTTGCGCCGTTGATCTGTTCCCCGCATCTGTGGGGCAATTTGCCTGCAGGAGGCTGGTGGTTTGCCTCTCAATGATTGCAAATTCCACCTCCTTGGTCCACAATGCACCCCATGCTAGAACTCCAACTCACCGACAAACCTTCCGAAATCCGTCCTGCCCCTACCCGTGAACGCCTTGCCAGGATGCTCGTCATCTCCCTTGCCGTGCACCTGGCAGTCTTTTCTGTTGTACTTCTGGCCCCGCAAGGGGGCGGCGATGGCCGTACCGTGGCCTTTGTCGATCTGACCATGCCGGAAGCCACCCCCGGGGCCGCTCCCACTGCTCCGCCACAACCGGTGCCGACGCCGCAGCCCTTGGCTGAACTCGGAGAGAAACCTGCGCCGGATGCCGACGAGCCTTCGGCCAAGAAGGCGGAAGCGGTCACCGAGCCGGCAAAGGCACAGCCTGTTGCCACCGGTGGTACCTCAATCAGCCTTGGGAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCATCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGTCCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //