Array 1 905862-906989 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048263.1 Gilliamella sp. ESL0443 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 905862 29 100.0 32 ............................. CGGTAATCAAGAGTATTTGTGCCTACCAATTT 905923 29 100.0 32 ............................. CTGGTAATTGCTTTTGATTTGCTGACTTTTGG 905984 29 100.0 32 ............................. TTGGCTGGCCAAAATTAGCCGACGTTAAATTA 906045 29 100.0 32 ............................. CTAAATAATCAACATGCCCCCATGGTCTCTTA 906106 29 100.0 32 ............................. TTGAATTTGATAATAATTCAGCATCTCAGATA 906167 29 100.0 32 ............................. AAGGCCTGTGAATGATGAATTAGATTGTATAG 906228 29 100.0 32 ............................. CAAATCACAACCGATTAAGCTCGATCGTGTAA 906289 29 100.0 32 ............................. TTTTTTGGATGTCCAAATTTATTGACCTGTAC 906350 29 100.0 32 ............................. TAAATTATCTGGTATAGCTAAAATGCTTTCAG 906411 29 100.0 32 ............................. CCAATAATGAGTTAATCAAAGGTAAGCAGTGG 906472 29 100.0 32 ............................. GTTTCTATTGTAAATGGTAAAGAGGTTGTCAC 906533 29 100.0 32 ............................. ATGTTCGAAACCACTTTAATGCCCCGGTTTAC 906594 29 96.6 32 ............................T ATTAACTGTAATATTGTATTAGAATTAAATGC 906655 29 100.0 32 ............................. AGGTTCACTTTCTCCAAAACTAAAACACGCTA 906716 29 100.0 32 ............................. AGGTTCACTTTCTCCAAAACTAAAACACGCTA 906777 29 100.0 32 ............................. CCCATTGCATTAAATATTGAACCGGTTTTTTT 906838 29 100.0 32 ............................. TAGTCAAACAGCTATCATCTAATAACACACGG 906899 29 100.0 33 ............................. TAATGCAGATAAAACTAGAAAATCTATAGATCT 906961 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 19 29 99.8 32 GTGTTCCCTATATACATAGGGATAAACCG # Left flank : TATTTGCCACCTATTCAGATAGACCTCTACGGCGCGTTGGCAGAGTGGCCATGCTGCGGATTGCAAATCCGTCTACCTCGGTTCGACTCCGGGACGCGCCTCCATTAAAATCCCAAGAATTTTATTTTGCTCATAAAACAATACAGGCTAAATTTTTTATTAATAGTATTGGGTTAATGTATCCAATCCACAAGAAGTTTTTTAAAATTCTCTTTTCTTAATATTTAAAATTATCAAAGATAAAAGTAACGCGACATTAGATGTTCGTGAGCTTACTATAGGCTATGAACTATTAACCAACAAAATATTGCTTGGTACCAACAAAAAACACAAAAACGGGTAGTATACAAAACTCTTTATTTATTTCATTTAACACATTGATAAAATTATAGATTTAACCAGTTGAGGTTTATGTACCATCTGATTAAAAAAACATCAAAAAAATTGGTAGAATTTTATACCTTGCTATTTTAATTAATAAACAATAAGTTATAATAAGG # Right flank : GGTAATATATTCAATATAAAACATTATCAAATCGCGTTCCTATGTACCTAGGTAAGTAAAATACCTGAGTGCGTAATAAAAAATAAATCATATAATGGCCTGAAAAATAAGGGATAAAGATGAGTAAATTAAAAAATGAAGATAAGGCTTTTAAAATGGATTTTTCTTTAGTGAATGATACAGATGATAATGAAAATCGAATCAATAAAAGCACACATAGAGATTATATTGATTGCTTAATGGATTTCTCTTTAAATGGAATCAGTATAACCCCATGCAATGAAAGTTTTGATATAGGTCCCCCTAGATTTGGTAATTTTTCTAGTGTGAGTGAATATTTAATATATCGTCAAATATTTCCGGACTGCTTTTAAACATTAATAAATTATTATATTAACAGTTGATCAGTAATATTTCTAAAAGTTAGTTATTTGAGTAAAAATTATGAGTAATAAAAATCTCACACAAGGTGGCCTGTTTTTTTTGTGCTTATTTAATGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTATATACATAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: F [matched GTGTTCCCTATACACATAGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.90,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1598211-1597571 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048263.1 Gilliamella sp. ESL0443 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1598210 29 100.0 32 ............................. AAACTGGGCTGCACGTTCTATTGTAAAAGACG 1598149 29 100.0 32 ............................. CGGACTTTAAATGATGCTAGGGTAATAATTGA 1598088 29 100.0 32 ............................. CAATAGAAAACGAGCTTTGCGACTGGTTCGAA 1598027 29 100.0 32 ............................. CAGGCAAATTTAATCGTTCAGCTAACTCTGTT 1597966 29 100.0 32 ............................. GCAAAAAAATAGTAATTTGCGTGGGCGTGGGA 1597905 29 100.0 32 ............................. ATTTACATGTAATTGCTACATTACTGAGCAAC 1597844 29 100.0 32 ............................. AAACTCAATATGGTTTGAAGATTTTTAATAAA 1597783 29 100.0 32 ............................. AGCACCGGACTTACTTTTTTGTCTGATGATAT 1597722 29 100.0 32 ............................. CAGTTTAGCCGTCTAAATGACGGCTTTTTTAA 1597661 29 100.0 33 ............................. GCATACCATTCACGTCGCACCCTATTTCAGTAC 1597599 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================= ================== 11 29 99.7 32 GTGTTCCCTATATACATAGGGATAAACCG # Left flank : TAATCTTTTTTATTGTTGGTGGAGAAGTGGTATGGTCAATTGGTCTTGTTATGCTTGTTGGTCAATTTATTGGCGCAAGATTAGGGGCCAAAATGGTTATCGCTAAAGGGCGAAAATTGATAAGACCAATGCTTATTACCGTTTCCACTATTATGAGTATCAAACTCATCTATGAAAACTTCTTTTAGTTATTCCGTTTTATACTAATAAGTAGGGTTTTCATAACAAACTTGTTGTTGTTTTGTAGTTGAAGTTAAAAGACTACAAAAATGAAACGGTATACACTCCTCAATCTTTTTTACAAAAATTATTTGATATTGAATAATTTCATATTAAATATCTTCTTCTAAACCATAAATATTTCTTAAATTTCTTGTACAAAACTGTAGCACTATATCTTTGTTGTTATGATTATTATCTTAGATATAAAAAAACACAAAAAAGTTGGTAGAAAAATCCAGGTTAATATTTTAATTATAAAACAATTGGTTATAATAAGA # Right flank : TACAAAATTCAGTAAAAATTTATTTAATTACTAAATTGAAGAAGTGATTTGTTATCATTGTGGTATCTATATAGGAAACTGGTAAGATATATTGATACTAGATAATTGATGAGTATGATAATTATCGACGATCCAAAGGTGAATAACAGCAATGAATTATATTGTAAACAAAATGCTATATTAAATTAAACAGTCTATCTATTTTGTTAAATTGGATTTTTGAGCTATAGTTTTTACTGCACATATAATTATATTTAATATATAGTTAAATTTATATTGCAAAATGATTTGCTTATAACAATCCATTAAGTGATGCCATGAAACTTCAACAATTACGTTACATTTTAGAAATAGCTCGCTCAGGCTCGATTAATGAGGCTGCTAAGAATCTTTATATTACTCAGCCTAGTCTTTCTACTGCGGTTAAGGATTTGGAAGCCGAATTCGGTATCGAGATTTTTGTAAGAACATCAAAAGGGGTTTCACTTTCGGCTGATGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTATATACATAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.30,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1876990-1875985 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048263.1 Gilliamella sp. ESL0443 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1876989 29 100.0 32 ............................. ATTGGAGTGAGAATATTGCTTGTTTCTATAGT 1876928 29 100.0 32 ............................. CATGGGTGGCGTTACAGGCCTCGATTACAATT 1876867 29 100.0 32 ............................. TAAAATTTTACCATCTTCTGTTATCAAGAAAA 1876806 29 100.0 32 ............................. CGGAGGCGATTCGTTCCCAACATCGAGGGGAT 1876745 29 100.0 33 ............................. GGTGATGGGATGTCTTTACAGTAAGCCTCAACA 1876683 29 100.0 32 ............................. TCTACTCATGAATAAGACCTTCTAAACAGATC 1876622 29 100.0 32 ............................. ACACGATTTATGATGTTGATTTACCCATCCCA 1876561 29 100.0 32 ............................. ACGACACCGCGCTTTCATTCAATGTTGGTGAG 1876500 29 100.0 32 ............................. TTTGCTTTTTTCTCTCAACCTTGCGCTTATAG 1876439 29 100.0 32 ............................. GAGATATAAATGTCCAAAATTCAGGTCAATGA 1876378 29 100.0 32 ............................. AAATCACATAACTGAATTACTTGCCCGCCAAC 1876317 29 100.0 32 ............................. CTGGCGATCGAGTTTCATTTTTTTCAATTTTA 1876256 29 100.0 32 ............................. CCGAATTTAAAAAATCATCGCCTGATACACTC 1876195 29 100.0 32 ............................. AATGAAAGAATGGATCAAATAACAATAAATAG 1876134 29 100.0 32 ............................. ATGAATTTGCAAATATCAAAAATATTTCAGCA 1876073 29 100.0 32 ............................. GGAATTTAACTCCAGTCAGACTGAGCAGTCCG 1876012 28 89.7 0 ....................T....-..A | ========== ====== ====== ====== ============================= ================================= ================== 17 29 99.4 32 GAGTTCCCTGTATACACAGGGATAAACCG # Left flank : CTTATTGAAGAGGTATTATCCGCTGGAGGGATTGAGCCTCCACCACCTCCAGATGATGTACCACCACCTGCGATACCAGAACCACAATCACTTGCCGATAGTGGCTTTAGGAGCCATTAATCATGAGTATGAGTGTTGTCGTTACAGAAAATGTACCACCTAGATTAAGAGGACGCTTAGCTATATGGTTATTAGAAATCAGAGCCGGTGTTTACATAGGCGATATTTCCAGACCGGTAAGGGAGATGATTTGGCAACAAATCATCGAGCTTGCTGAAGAAGGTAATGTTGTACTTGCTTGGGCAACCAATACTGAATCTGGATTTGACTTCCAAACTTATGGTACCAACAGAAGAGTGCCGGTAGAACTCGATGGACTCAGATTGGTCTCTTTTTTACCTATTGAAAATCAATAAGTTAAAGTTCTTTAAAAATTCAAAAAATCTGGTAGAATTTTATGGTCGCTATAAGTTTAAATAAAACAAATAGCTACGTTTAGA # Right flank : TTATCTATATCATAAAAACTCAATATATAAAAATCATGGCATTTGAAATTTTCAGAATATCTAGAATTGTTAATTCATTAGGGATCATTTCAATTTTTTATCCATGTTTTCGTAGATCTTAATTGGCTTAATGGGGATTAATGTTTTATCTTTTACTTCAAACTCAGAATTATTACTGGAAACAACTATTATCTGTCCTCTTTCTAAGTTAAAATCTAAAAGTGCATATGGTTCTACAAAACCTAAAAGAGAAAACTCCCTATCCCTGTTATCCGGAGGAAATTCGTAATAGACAACTTTTTTATTATATACGTATGCAACTGTATTAGAAAGATGTTGAGCTATTCCAAAGTCAGGATTCTCATCAGAAAATTCTACTTTTTTGACATCAATATTTTGTTCCCGCATTAATGTAATATAAAGTCCACTAATACTGCCACTGATTAACCAAACTTCATCCCATTTAAAATTGGTATAATCAGAGAGTTTTATGGTTTGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCTGTATACACAGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: R [matched GTGTTCCCTATACACATAGGGATAAACCG with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //