Array 1 231951-233899 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB902240.1 Fangia hongkongensis FSC776 = DSM 21703 A37QDRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 231951 28 100.0 32 ............................ CTTCATACGTAAAATAATCTCTAAGATCATCT 232011 28 100.0 32 ............................ GTCAATGATACCCTTGCAGTAGGTTGTCAACA 232071 28 100.0 32 ............................ GTCTGAAAAAGGGAAGTTAGCTACAATTACGT 232131 28 100.0 32 ............................ CTTAACAATTAAATCCATCAACGAGGCGTTGA 232191 28 100.0 32 ............................ GCATCACTTAAGATACACTTTAAAAAGCCCCC 232251 28 100.0 32 ............................ CACCGAGGGCTGACTTTATCTAATGGGAATTT 232311 28 100.0 32 ............................ TTATTGTTAAAGGGCTCAGCCAGTATCTCTTA 232371 28 100.0 32 ............................ TCATGATCTTCTTATTAACGTTGATTATATTG 232431 28 100.0 32 ............................ AATCTGAGTAAGGAGATAGACATGAGATTCAA 232491 28 100.0 32 ............................ CAAAGGACGGGGGATTGTCAGACGTGGTGGAA 232551 28 100.0 32 ............................ TAGTCAAGAAGAAGCTATTGCGTAATTGATTA 232611 28 100.0 32 ............................ ATTGTATGTAAAGTTATCTTTAATTAAATCGT 232671 28 100.0 32 ............................ ATATACTTCTTTAGCTGCGTCAAGATATGATC 232731 28 100.0 32 ............................ AGATTCTTGGTTATACGGAACTATACTTATAT 232791 28 100.0 32 ............................ ATTATATACATAGATACCACTGTGTCAACAAA 232851 28 100.0 32 ............................ TACCAGTTGAAGTATCTCCGGTATGTCCTCCA 232911 28 100.0 32 ............................ AGCTTATTGCGCTTAGGCATAATGACGGTTTC 232971 28 100.0 32 ............................ ATATCAGCAGCAATTAGCAGCTTAATAGCGTA 233031 28 100.0 32 ............................ ACTCATTTTTATCTAGATCTGCTAAAGCTCTT 233091 28 100.0 32 ............................ TCAATTAAAAAGTCAATATCCTGCTCACCATC 233151 28 100.0 32 ............................ TCAAAGACATTAGTTGAAGCCCAGTTGCTACC 233211 28 100.0 32 ............................ TCTATCTTTTCATGAGACTTCTTTGCGATTTT 233271 28 100.0 33 ............................ TCATCATAGGATCGAGTAACCGTTTGATTGGCT 233332 28 100.0 32 ............................ TTCACCCACATCTTCTTTTTCGCCCACCCAGT 233392 28 92.9 32 ...........T.T.............. TTTAAAAGACATCAAGGCTCCGCAAGGATTGC 233452 28 92.9 32 ...........T.T.............. CAACTGACATAGCCCTCTACCTCTGGCGCAAA 233512 28 92.9 32 ...........T.T.............. TCTTCTTTGTACTTTTCGCTGTGTTTTCTCTA 233572 28 92.9 32 ...........T.T.............. TCGCCATCATGATATTTGACGTTGAGTGATTC 233632 28 92.9 32 ...........T.T.............. ATGCCCTTTAAGCTTGTGGTCATATTAAGATA 233692 28 92.9 32 ...........T.T.............. TAAAGTAGGAAGGCCATCAGCAGCATTATAAA 233752 28 92.9 32 ...........T.T.............. TCGATAAAGAAATCAGGCGAGCTAAAAGTGCC 233812 28 92.9 32 ...........T.T.............. TGCAATTAATACAGGGGTATTGACTGGAAAGA 233872 28 96.4 0 ................A........... | ========== ====== ====== ====== ============================ ================================= ================== 33 28 98.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AACATTGATTATTGGCTGAAGAGATTAAAAGACTACTGTCATATCACATCAGTTAAAGCTGTTCCTATTCAACATACATTTGCTTGCTTTAGTAGGAAACAGGTGAAATCCATAGAAAATAAAGCTAGACGACGAGCTAAAAAATTGAACGTTGACTATAAAGAAGCTCTTAAGTTTTTTAAGCATAAAGAATCAGAATTATCATGTACACTCCCTTTCATTCAAGCAGTCAGCCAGTCTACATCTACCCCGCAAAAGCACCAAAACACTTTTCCTTTATTTATTGAAAAAAAAGAAAGTGATGTAGTAATAAATGGATCATATGATTGCTATGGTCTAAGCAAAACTGCAACGGTCCCAATATTTTAACCTTTATTTTTGGAAGGTTGAATCAGCTCTTTAAAAATCAAGCATCTAGAGTTTAAGTAAAATTATTGGTGTTTTTATACAAATCGCCCTTAAACGCTGACTATTACTGTATTTATGGGTATAATTTTACT # Right flank : AGGTTGTAGAAATCATATAATATTCATGAGTTTTTCACCACCGCATAGAGTGAAAACGACTAATGCATTGCGCTAAAGCAATGCGCGTTTGAGGGCCATTTGTTATGGATTTTCAAATTGAGTGCTTCCCCTTTAAGGCATGGATAACCGAAAAGGGAAAGGCTTAGAAATATCAGCTCTCTTTTTGAGTCACCAACATCCCCTTTTGCACCGCTTCTCTTTGCGCTACTTCATTTGCCCATCTGATAAGCGATGGATAGCTTTTCACATCTAAAAACCTCGCTGCTTCATAGACTTTATTCAGCACAACACCGCCATACCATGGGAAAATAGCAATATCGGCAATGGTGTATTGATCCCCACAAATATACTGATTGTTTTTAAAATGCTGATTTAACACATCCAGCTGCCTTTTTGCCTCCATGGTAAAGCGATCAATACAATACTCGATTGGCATCGGTGCATATTTATAAAAATGACCAAAACCTCCGCCTAAATAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //