Array 1 186942-184234 **** Predicted by CRISPRDetect 2.4 *** >NZ_ULFI01000005.1 Klebsiella pneumoniae strain EuSCAPE_LU002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 186941 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 186882 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 186821 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 186760 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 186699 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 186638 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 186577 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 186516 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 186455 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 186394 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 186333 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 186272 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 186211 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 186150 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 186089 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 186028 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 185967 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 185906 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 185845 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 185784 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 185723 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 185662 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 185601 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 185540 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 185479 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 185418 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 185357 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 185296 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 185235 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 185174 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 185113 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 185052 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184991 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184930 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184869 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184808 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184747 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184686 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184625 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184564 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184503 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184442 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184381 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184320 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 184262 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //