Array 1 1-234 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJMA010000250.1 Fusobacterium mortiferum strain An397 An397_contig-110_249, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1 36 100.0 30 .................................... AGTCAAATGGTTTACATGTTTAAGGCACTC 67 36 100.0 30 .................................... GAAAAAAATTACTTGTGTACAATGGGATTT 133 36 100.0 30 .................................... ATGAGGCTAAAAATAAGCTAAAAGAGTTCG 199 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 33 GTTTTAGTACCTTGTAAAATTTAAGTAAGATAAAAG # Left flank : | # Right flank : GTGCTGGCATAATTAAATGCCAACACTAGAAAACTTAATCTAATTTCCCCTATTTTTTCAAACTAAGTACTCCAAGAGCAATAAGAGTAACTACTAATCCTATTAAAGAGAGAATAGTAGGCACTTCATTATAGAATATTACTCCAAATATAGTAGCTGCAATAGGTTCACAGGAACAGAGTATTGAAGCCTTCCCAGCATCCATATATTTAAGTGATATAGTATATAGAGCATATGGGAAAATACAAGTACACATAGAGTGTGCAATCATAAAAATAGATATTTCAATAGGATTAGAACTAACAAGTTCAGTTACAAATTTCCAATCATTCATAGGAAAAAGAACAATAGTAATAGCCAAAGTACTATAAAAAGTTATAGTGAGAGCATCATACTTTTTTTCCATAGCAATTTTTGAAAAAATACTATAGAGTGAATAGAAAACTGCTGAAAGTAGTCCTATGAAAATTCCTTTAAAAGACCAGTGCATACTTGAAGTT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAAAATTTAAGTAAGATAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 501-923 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJMA010000273.1 Fusobacterium mortiferum strain An397 An397_contig-110_272, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 501 29 100.0 36 ............................. GATGACAATAGAGATAAAAAAAGACACTATAAAAGA 566 29 100.0 36 ............................. ATTGTCAAAACCTTTCTTTTTCATAGCATAAGCAAA 631 29 100.0 36 ............................. ATATCTGCTAGCTGGATTTCCCTTAAAGCTTCCAAG 696 29 100.0 37 ............................. TATATCCATTTTCAGTAGCTTGTACCCAAATATTTAA 762 29 100.0 38 ............................. AACAACTCTTTATTTGTGGCTCTGTTATTAATAGCTCC 829 29 100.0 37 ............................. TAAATTATCTAATCTGTCAGAATTTGCTTTATTGCTA 895 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 7 29 100.0 37 GACTAAAGCCAAGTATTTGGCATTTAAAC # Left flank : ATATCTTTCTTTAAATAAAAAGATAAAAGAAGGAAAAGTATTTAAAAGAGAAGTGATAGATTTAAGACAGTATTATTTATTTACTGAAGAAGTTAAATTTAAAGACTTGAAATAATGAAAGAATTTTGATATAATAACTGTGTTATCTTTTCATTGAACACTTCTATGAGCTTAAGATAGACTTCTATATTAAATCAGGAGGTACTATACATGACTTGGATAACAATAATGATTAATTTACTTCAGTTAATAGTTGCTATTCTGCAACTTATGAAGTAATATTTTGGGGTGGTTTTTTTACTACCCTTTCTTTGTCTATGGGTAATAAGGTAAAAATAGTAGAGGATCGACAAAGGAGAGAAAATACTTATAAAATAGGGGATTAAAAGAAAAAAGTATATTGTAATAATAAGATTAATAGTAAATATTTAATCTCAAAATAGTGGTCGACAAAAATATATAGGAAAAGAATTGAGTTTATTGTATTAATAAACTATCGT # Right flank : CTTTGCTCCAATCCATCATTCTTTATCACTCCTTTTTTAAGGACTAAAGCCAAGTATTTACAAAAGAATAAAATTAATAAATAAGCTTTCATTTTTATGGGAGCTTTTTTATTTTAATATGGTATAATATATAAGGAGGTGTTTATATGTTGAAAGGAATTCCAATAGGTATTGAAGATTTTAAAAAAATTAGGGAAACAGATTGTTATTATATAGATAAAACAAGATTCATAGAGGATATATTAATAGATAGAACAGAGGTTAAACTTTTTTGTCGTCCAAGAAGATTTGGAAAAACTTTAAATATGTACACTTTAAAATATTTTTTTGATGTAAGAAACAGAGAAGAGAATAAAAAATTATTTAATGGATTGTATATAGAAAATTCTCCTATGATGAAAGAGCAAGGTAAATATCCTGTTATATTTATTAGTATGAAAGGGTTAGGAGGATTAAACTGGGATATTTCTTTGGGTGGAATAAAAGCAAAAATAAAAGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACTAAAGCCAAGTATTTGGCATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 1-498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJMA010000422.1 Fusobacterium mortiferum strain An397 An397_contig-110_421, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1 36 100.0 30 .................................... ACCAATCATTTACAATGGATTATACTCATA 67 36 100.0 30 .................................... CTGGTTGAATTTTCTTCCAATATTTGCATA 133 36 100.0 30 .................................... TCAAGCACTAGAGAGAGCATTGGAGATAAG 199 36 100.0 30 .................................... AAAATGTCAGAGGAGCATCTAAATATGATG 265 36 100.0 30 .................................... CTCAGATGTATATAACTATTGGCGAATACT 331 36 100.0 30 .................................... TAAATTACATCATAAGTATGCTATAATTTA 397 36 100.0 30 .................................... GTCCACACATACCAAATCCCCTCATCGCTC 463 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 31 GTTTTAGTACCTTGTAAAATTTAAGTAAGATAAAAG # Left flank : | # Right flank : AAAATTTCAGGAGTACAAAAATGATTGATGTCGTCTTGCTTTTATCTTACTTAAATTTTACAAGGTACTAAAAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTACCTTGTAAAATTTAAGTAAGATAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 40-1558 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJMA010000038.1 Fusobacterium mortiferum strain An397 An397_contig-110_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 40 30 100.0 38 .............................. AATTTCAATTGGGGCTTTTATTCTGCCCTTGAACAAGG 108 30 100.0 37 .............................. GAAACAGTTGAATTTGATATTAAAGTTATTTTTAACT 175 30 100.0 39 .............................. TAAATGTGGGGTATGCTACCCTACAACATCACTAAGGAT 244 30 100.0 39 .............................. GTTAAAGAGGGAATGATTTTTCCAGTTTGGTTTACTAAA 313 30 100.0 39 .............................. TTTGATTGGGAGTTTTATGGGGACACATTGGAGTTGGCA 382 30 100.0 37 .............................. TTAGCTGACTGGGGAATAACGGAGAAAGATGCTTTAA 449 30 100.0 36 .............................. TTCTATAGACTTGTATTCTCTTAATTGTGTTCTGTG 515 30 100.0 39 .............................. TTGTATTCACTCCTAAAATGTTTGTTATTTGATTTATGC 584 30 100.0 38 .............................. ATCAAAGCACATAGAAAGATGGTTTGTGGATTTCAAAG 652 30 100.0 39 .............................. AGATGTACCTACCGCCGCAAATATCCTAGAATATGCAAA 721 30 100.0 39 .............................. TTTCCTGCCTTTGCTAAGGTTATTTTATTAACCTTAGTT 790 30 100.0 40 .............................. AATCTTGAGGAATTAAATTTATCTAACTGGGTAACTCATG 860 30 100.0 35 .............................. AAGGGGCTATACACAGACAATGGAGCTGCTTATAA 925 30 100.0 38 .............................. TTGTCTATGACTAACGTAGAGGGAGCTGATGAAATTGG 993 30 100.0 38 .............................. AATGGTTAGAGTAAAAGGACTTACAAGAGCTAATGAGG 1061 30 100.0 35 .............................. AAATCTATCATTCAAATGATAATGTTCATTTAACA 1126 30 100.0 38 .............................. ATATTTCTCCGGTTAAGTTATCTATATTGAAATAATTC 1194 30 100.0 36 .............................. ATGTTCTTTGTTTTTTTGTTCGTTATAAACGTATGT 1260 30 96.7 36 .............................A TCATTATTGGTATCACTATTGAATTTACATTATTGA 1326 30 93.3 39 ........................A....A TTGATTTAGCTTTTGCTCTAAGCTCTTTAACTGTCATAA 1395 30 100.0 38 .............................. AGGAGCAAAAACAGGGTTTGTAAAATCTTTTTAAAAGT 1463 30 100.0 37 .............................. GCCATTGCTATTACTGAGGCTATCGACCCCGCTATTC 1530 29 80.0 0 T..............A........-..TGA | ========== ====== ====== ====== ============================== ======================================== ================== 23 30 98.7 38 CTTTATATTTAATCAGAGTGGAATGTAAAT # Left flank : AGATAATGTATTATAAAATAAAGGATAAATAGAAAACGTC # Right flank : AGTACTATATCTCCCAAAAAGTAATGTAAAATAAGTATTGACAAATCAAATTAATAAGCTTATACTTAAATTAGAATAATAAAATATATATCTTCAGGGCAGGGTGAGTGAGAGCAATTCCCGACCGGTGGTAATAGTCCACGAGAATTTTTATAATTCTGATTTGGTGAAATTCCAAAACCGACAGTAAAGTCTGGATGGAAGAAGAAAAGATGTCTGCAAAGAAATCTTATACTTTTTTAATATGCCCAGAGAGAATCTGGGCTTTTTATTTGTCCTGATAAACTAATCTGGGCTTTTTATTTGTCCTGATAAACTAAGGAGGAAGAAAATGAAAGTATTACAAGGAAATTTTACAGGTAGAGGATTAAGAGTAGGTATAGTAGCAGCTAGATTTAATGAGTTTATTACTTCTAAACTTATCGGAGGAGCAGAAGATGCACTATTAAGACACGAAGTAAAAGCTGATAACATAGATTTAGCTTGGGTACCAGGAGCTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTATATTTAATCAGAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //