Array 1 18142-14816 **** Predicted by CRISPRDetect 2.4 *** >NZ_VNIB01000009.1 Geothermobacter ehrlichii strain SS015 Ga0244669_109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 18141 29 100.0 32 ............................. ACGCCGCCCGACGGCTGGCCGATGCGAAAATC 18080 29 100.0 32 ............................. CCATGGGGCTGTCGGTCAACCAACTGACGGCC 18019 29 100.0 32 ............................. GTCTACCTTTCTTCACAGACCCTGTACGACAG 17958 29 100.0 32 ............................. ATTTCTTTTCTCAAGCTCTTGCGGTCGCTCAG 17897 29 100.0 32 ............................. AATGGATTTCAACCCTTACTCAATGGCTGAAA 17836 29 100.0 32 ............................. ACTGAACCCGGCGCCCTGTGCATCCAGCACTG 17775 29 100.0 33 ............................. GCATTTAACCTTGGTGCGACTCCGCCTGCATTT 17713 29 100.0 32 ............................. CAGGCTTGCCGGGATGGGCTGCTGATTCCCTT 17652 29 100.0 32 ............................. CTCACACTGGTCTACGACAACACTACCTGTTG 17591 29 100.0 32 ............................. GTTACGCACGGCTGGCTGTCGGCGCGAACTAC 17530 29 100.0 32 ............................. CTCGAACGCAACAACACCCGCAGCTATCTGGG 17469 29 100.0 32 ............................. TGGGTTGGCGCTCCCTCGATCATCCGGACCGG 17408 29 100.0 32 ............................. AGTCATCAATCACACATCCGGCCAGGCTCATG 17347 29 100.0 32 ............................. TCCCCACCAGTCGGGGTTGTCGCTTGTCCATG 17286 29 100.0 32 ............................. AGGAAGAGCATTTTTGAAAGGAGATAGGTGAT 17225 29 96.6 32 ............................T GCTGCCGGTCATGGTATTACGGCGACTACGAC 17164 29 100.0 32 ............................. TGATAACAGCTCCGGCTGTAATCGATATACCA 17103 29 100.0 32 ............................. GCCGAGACTGATTCCGAGGTTCATTTTTTCCT 17042 29 100.0 32 ............................. GGGTCGATACCCTTGTCACGTGCGTCGGCCAT 16981 29 100.0 32 ............................. TGGCTGTTTTTATTTGGTCGGGGCGAGAGGAT 16920 29 100.0 32 ............................. GACGCGCCGGAGGGCAAGCGTGTGGTCACCAC 16859 29 100.0 32 ............................. ATAAACCAGCGCCTTGTGCCGCGAGTGTCACG 16798 29 100.0 32 ............................. AGAAAGCCCGGGAGGCCCGCAACCTGCTGGAC 16737 29 100.0 32 ............................. GTCGAAATCGTCTGCCACATCACCGGCAACCC 16676 29 100.0 32 ............................. AGTTCATCGGCGGCCTGCGCGATGCCGGCGAG 16615 29 100.0 32 ............................. TCTTAGCCCTTGGCGCTGTGCTTGGCAAGTGC 16554 29 100.0 32 ............................. CATCTTTTCTGCCGGGAGCATTGGGAGCAGCA 16493 29 100.0 32 ............................. CGGCTGTTTTTATTTGGTCGGGGCGAGAGGAT 16432 29 100.0 32 ............................. CGAGAGAGACAGGCCCGGTGGAAGGCGGCACA 16371 29 100.0 32 ............................. GTGGTCGATCATCCCCGAAAGCGTGAGGGGGG 16310 29 96.6 32 .G........................... CTCGCCCACCATGTGTGGGTGGAGTTCCAGCC 16249 29 100.0 32 ............................. GATTGTCTCGATTATCTCAACGGCCTGATTGG 16188 29 100.0 32 ............................. AGAACTGAATCGTCAACTGCACGGAATTTACT 16127 29 100.0 32 ............................. AATATGTTGAGAAAAAGTCGAGGTGAGGGCGA 16066 29 100.0 32 ............................. GCCTGCAAGCAGATTCAGCGGCTTGCGGAGAC 16005 29 100.0 32 ............................. CAGGGATATGAGCGGGAAGAGGCGCATGGGTT 15944 29 100.0 32 ............................. CGTCAGGGCCACCTGCTCGAGGCGCTGGCTCG 15883 29 100.0 32 ............................. CAGTCGATCCCTCAGCTGAATTTCAGCGAGAC 15822 29 100.0 32 ............................. TCCGGAGATGAAGCCGGGATTGACTGCGGCGG 15761 29 100.0 32 ............................. ATATAGAATTATTGTTTTTTTGTTATGAAGAC 15700 29 100.0 32 ............................. TCAATCGACCTTGAACCGATAATCCTTTGACA 15639 29 100.0 32 ............................. GTGACAGCATGACTCTTTTTGGCGTTAAATTC 15578 29 100.0 32 ............................. GCTTTTCCCCGTACTTTTGCCACCAGCGGACA 15517 29 100.0 32 ............................. TTGGGGCGGCAGTTGATGCGGTCTTCGCCGGT 15456 29 100.0 32 ............................. AAAAGAATGACGGTTCGAGCGCACACTAAAAA 15395 29 100.0 34 ............................. AGGGGGGGGTGACATGCTGAGTTTGCCTGCCGGT 15332 29 100.0 32 ............................. CCGTTGGTATGTCCGTTTCTGCTTTCGTTCGG 15271 29 100.0 32 ............................. ATGTTACCGGACTGGCTGCCCTGGTCGATGGC 15210 29 100.0 32 ............................. GTGTGCCGGGTAGCGGCAAGAGTTATGATGCT 15149 29 100.0 32 ............................. TCGCCGACCATGGGGCTGGTGTCGGAGTAGTA 15088 29 100.0 32 ............................. TTCACCGGGTTCGACGGAGCAATGGTGTCGAT 15027 29 96.6 32 ............................C GGAATTCGGCGGCGAAAATGGAGACCTCGCCT 14966 29 100.0 32 ............................. GTACGTCTCTTTGATGCGCGATTTTCGCGCCC 14905 29 100.0 32 ............................. GTACGTCTCTTTGATGCGCGATTTTCGCGCCC 14844 29 89.7 0 .....................T....T.A | ========== ====== ====== ====== ============================= ================================== ================== 55 29 99.6 32 GTGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : GCTCCTCAAGCGGATCATTCCGGCCATCGAAGAGGTGCTGAATGCCGGTGAGTTAGATCCGCCTAAACCGCACGCTGAGGCGGTTGAGATGGCAATTCCGAATAAGGAAGGGATTGGCGATGCTGGTCATCGTGGTTGAAAATGCCCCGGCGCGTTTGCGGGGCCGTCTAGCTCTATGGCTATTGGAAGTGCGGGCAGGTGTTTATGTGGGGAAGGTATCGAAACGGGTCCGTGAGATGATCTGGAACAATCTAGAAAAGGGGATCGACAATGGCAATGCAGTGATGGCTTGGAGCTCCAATACCGAATCCGGGTTTGATTTCATGACCTTGGGAGCCAACCGCCGTATCCCGAAAGAAATGGATGGTCTCAAGTTGGTTTCTTTCCTTCCGACAGATGGTTTGTCGGATAGCCCCAGGGTGTATGGGAAGTGAGGGATTTTATTTGGTAAGGTTAGTTGATCTTTGAAAACATAATATTTTCGATTAGATAGAAGAAGT # Right flank : CCTTGGCCCGCCTCCTCAAGGGCTCCATGCCAGGTCGGGCATAGGGACACCCAGGGCAGAATTTCCCGCATGAAGGCAGTCGGTTTGAGGTGATGAGTTCAGACCAGCCGATCCGTCTTCGCGGCCATGATGAAATCGTTGCGGTGCAGGCCGCCAATCTTGTGGGTCCACCAGCTGACGGTGACGCGGCCCCACTCGGTCAGGATCGCCGGGTGATGGCCTGCCTCCTCGGCGAGTTGGCCGACCGCATGGGTGAAGGCGAGGGCCTCGGCGAAGTTTTTGAACCTGAAGCTGCGCCGCAGCCGGTCGACGCCGTCGATGGTGACGATTTCCCAGTCGGGCAGCCCGCTCAGGTAGGTGGCGGCCTCTTCTTCCGTCACCGGGGGCGCGCCGGCCCGGCAGACCTCGCAGGTCGCCTGGCTTAGATCGATCATCCCTTTTTTCATAGTGATATTTTACTCCATGGGCTCAGGTTCCGAACAGGGCCGACACATCCGGCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //