Array 1 1471336-1476836 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP089095.1 Flavobacterium sp. KSM-R2A25 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1471336 46 93.5 30 T..A..T....................................... ATGGAAAAGATTATTACTTTGAAAATAAAA 1471412 46 100.0 30 .............................................. CGGCTCCATTAGAAAAAATGCAGCTTACTG 1471488 46 100.0 30 .............................................. CCAACTCTTAAAAATCATTTCGCAGTAAGA 1471564 46 100.0 30 .............................................. CGCTTTTTCAATCGGTTGTGTAAATCTACA 1471640 46 100.0 29 .............................................. ACTTCAACAAAATACAAATCCAGAAGAAA 1471715 46 100.0 30 .............................................. AGCCATTGCGGAAAAATTTATAGAATATCA 1471791 46 100.0 30 .............................................. TACTATAAATGTAGGAATGGCGACTATCGA 1471867 46 100.0 29 .............................................. AAGCCGTTAAAGTTTATGTTTAACATGTT 1471942 46 100.0 30 .............................................. TTGGTTTTGTGCCATTGTTGAGCCAACTGC 1472018 46 100.0 30 .............................................. TATCCAGATGTAAGCGCAAGTGCTGGTTTA 1472094 46 100.0 30 .............................................. TTTGTATAACGATGCCATAAGTATAAACCA 1472170 46 100.0 30 .............................................. TTTACCACTTTCAGGCATTATCAAATTGGT 1472246 46 100.0 30 .............................................. TCGGGAACAATGGTTTTACGTTCTTAGACG 1472322 46 100.0 30 .............................................. AGTTAACTGATAGCTTTTGATGTGGATGTC 1472398 46 100.0 30 .............................................. TTGGAAGTGGAATGAAGCTACAAAGCGAGC 1472474 46 100.0 29 .............................................. AATAGGAAAAATAGTTTTATACGAGCCTT 1472549 46 100.0 30 .............................................. TGTTAATTGGCGACCATTATTCCAAATTGA 1472625 46 100.0 30 .............................................. ATTGTTTTTGATATAATTATCAAAAGAACC 1472701 46 100.0 30 .............................................. CAATGATACAAGTAATCAATTTCCCACCAG 1472777 46 100.0 30 .............................................. TGTTCCTGCTTTTGGATTTCCTTGTGCATC 1472853 46 100.0 30 .............................................. AAACAAATTGCTGATGAATTAGGAATTACA 1472929 46 100.0 30 .............................................. CTTTGTTTTTGGCGTTACTCCGTCCATTGG 1473005 46 100.0 30 .............................................. TCAGAATCATCAATAATAAACCAAGCTGCC 1473081 46 100.0 30 .............................................. GAATTGCTCCTCAAATGTTTGACCGCTTAC 1473157 46 100.0 30 .............................................. TTTCTCTGAAGTTTAATAAAACTAATGATA 1473233 46 100.0 29 .............................................. TCTATAAGCTCGTCTTTTCCTGTTCCTCC 1473308 46 100.0 30 .............................................. GGGATTTCTACCTGTAAGCCTGTAAGCTCA 1473384 46 100.0 30 .............................................. TGTATTACTTCAAGCATCTGCTCGTAAGTA 1473460 46 100.0 30 .............................................. CCAAATAGAAGGAGGAATGGCAAATATTTA 1473536 46 100.0 30 .............................................. CTACTTTCGCTTTAGGACTAAACAAAATAA 1473612 46 100.0 30 .............................................. AAGAGCGAGAAGAAAACGACTTTTACGCAA 1473688 46 100.0 30 .............................................. ACGAAAACGCAGAACCAAGCGATATCAGTA 1473764 46 100.0 30 .............................................. AAATTTTTCAAAAGGATTGTCAAATTTAAA 1473840 46 100.0 29 .............................................. CAAAGTATTTCAAAAACAAGTTAATGACG 1473915 46 100.0 29 .............................................. TTGTTAAAGGAGAACCACTTGTGTAAGTT 1473990 46 100.0 29 .............................................. TCACAAATAGGAATACTAACAACTCCCTT 1474065 46 100.0 30 .............................................. TTTTGTTTTGAGGGGTTCGGACTTGTTTCT 1474141 46 100.0 30 .............................................. TTTTTCCCAATATTGTTTTGCTATAATATC 1474217 46 100.0 30 .............................................. TTTAAAACCTAACGACTCCAGGGCGCGGAT 1474293 46 100.0 30 .............................................. TGATATCAACTACCAATGTTTTAGAACCTA 1474369 46 100.0 30 .............................................. TGCTTTTGTATTAGGATTATTATACATACT 1474445 46 100.0 30 .............................................. AGGGTAGAAATTAATAGAGGCACGTCCATA 1474521 46 100.0 30 .............................................. TCGGGTACGCCGTTTATATATTTTACGTCA 1474597 46 100.0 30 .............................................. GTGGTGGTTCTGCACCAACACCGGCTTCTG 1474673 46 100.0 30 .............................................. TGTTGTTATTATTTTTTAAAGTTAGGTTTA 1474749 46 100.0 30 .............................................. GCTGCATTCGTAGGTATGGCTGTTAAACAA 1474825 46 100.0 30 .............................................. CTACTAATGCCGACATAAATCCCTCAGCAA 1474901 46 100.0 30 .............................................. AACAGGGATTCTAGATTTAACTACTTACAT 1474977 46 100.0 29 .............................................. AGCTATATAACTCAACTATGTTAAGTGGT 1475052 46 100.0 29 .............................................. AAGCTTTAGAAGATGCTGGTGCTAATGCA 1475127 46 100.0 30 .............................................. ACTTTTGTTCGTGTTCTCGATGCCAATCAA 1475203 46 100.0 29 .............................................. GTAATACGTTTTGGCATATCTTCTTTACG 1475278 46 100.0 29 .............................................. TTGTATGTTGAAGGTAAAACAGCACAAGA 1475353 46 100.0 30 .............................................. GCCGAAGCCGAAAACAAAGCTTTAAAACTT 1475429 46 100.0 30 .............................................. GCAAGATGCCGACATCATTCAGTTTATTTA 1475505 46 100.0 30 .............................................. AGATTTATTGTATTTGTATAATGCGTATTT 1475581 46 100.0 30 .............................................. TTATTCTTACGAATGGAAGTAATATCAGAA 1475657 46 100.0 29 .............................................. TCGTTTGCGTGCTTCTGCTTCCATTTCAA 1475732 46 100.0 29 .............................................. TGTTCATATTTGTATTTGGTTTTTGATTA 1475807 46 100.0 30 .............................................. TTCGCTATCTTTCAGCGATGCTAAACGCTC 1475883 46 100.0 30 .............................................. TTCAAAACACTACCAACACACCACTCAAAA 1475959 46 100.0 29 .............................................. TCTTACGCCTTGAGTAGTTCCACCGCTTA 1476034 46 100.0 30 .............................................. CTTTTTTACCTGCTTTAGCTGAATCAATTA 1476110 46 100.0 30 .............................................. TCCATTTCCATATCGAAGGACATGCAGTAT 1476186 46 100.0 30 .............................................. GAAAAGATTATCACAATACACAGCGGTTAA 1476262 46 100.0 29 .............................................. AATGTGGCTTTAATTCAGTTGCGGGGTGT 1476337 46 100.0 29 .............................................. CGCAAATCACTTAGCAATGGTCTTTTACT 1476412 46 100.0 30 .............................................. ATGAAAACCTACGATACGCTGCATGGTATA 1476488 46 100.0 30 .............................................. TGGCGGACTTGGAAACTCGATAAGCTTTGA 1476564 46 100.0 30 .............................................. TGAAACCACACGAAAAAAGGACATTGGATA 1476640 46 100.0 30 .............................................. TTGAACATCATGGTATATTTTTCCAATTGC 1476716 46 100.0 29 .............................................. CGCTTCACCTTTTGCAACTAATGCATCTT 1476791 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 73 46 99.9 30 GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Left flank : CCTACTATTTAAGTACGAAAAACAGTGAAAAGTCTATCAATAAAAGTAGTTTCACCTAATGAGTTTACAGTTGTTTGATCAAATGGAAATGCATTTACATATTCTGTATTAACTGGTGGTTTGTGTCTGAAGATATAAGCGGCTTCTACTCTGAATCTATCATCATTAACTACTTGACCAACTGAATAACATAATTCCTGACCTGGTTGTAGATACATTTTCCAAATATCATATTTTTCATGATTTTGAATTCTTAAATTCACATGATCAGATTCTCCAATATAAATTAAATTGTGAAGTGTTACTGTGTTTTGTTGCGGGTTGTAAGTTGATGTATATACAAAATACACACCCTCTAAATTTGGAATTCCATTTTTTTTAGAGTCTCTGTAGTACCCATTGATATTTACATTAAATGTTGCTGCTGCCATAATTTTTTTTAAATAAATTTAATTAGTTATCTTATAAATTACAATACGTGTTTTTACGTAATTTAATAT # Right flank : CATACCGCGATATAATCGTTTGATATGTTGGTAGTTATGAGTTTTTTTGAAATTAAAAAAGAGTAGGTTTTATATGTTGGTAATTAAGTGGTTATGAGTTTTTTTAATCCTGATGACTAAAATAATTCCAATTGTTGAGAAGGTTTATCTGTTTCTATTTGTTTTTTTCCATAGAAAAGCTCCATCATTCCAAATTGCTTGTCGGTGATTTGCATTACGCCAATTTTGCCATGTTCGGGTAATTTATTTTTTATTCGTTTGGTATGTACTTCTGCATTTTCTTTACTAGCACAAAATCGCATATAAATTGAAAATTGGAACATAGAAAAGCCATCGTCCAATAAGTTCTTGCGAAATGTACTGGCAATTTTACGCTCTTTGCGTGTTTCGGTTGGTAAATCAAAAAATACTAATATCCACAAACTCCTATATTGATTTAAACGGGTATATTGTTCGTCATACATAAATAGGGTATAAAATTTTCCTTGCTTTTCCTTCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTTACTTATAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTCCCAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //