Array 1 101247-104452 **** Predicted by CRISPRDetect 2.4 *** >NC_009719.1 Parvibaculum lavamentivorans DS-1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 101247 36 100.0 30 .................................... CGGCGCAGTTCAGCATCCCCGCCAGCTTCG 101313 36 100.0 30 .................................... AGGCAGACACGTTCACTCAAAAGAGATTAC 101379 36 100.0 30 .................................... CAGAAGAGGCGGCGGGAATACGTTCGGCCC 101445 36 100.0 30 .................................... CGCCCAGCGTTCGTCTGTCTCTTGATCGGG 101511 36 100.0 30 .................................... GAAGCCCGGTGACGATCCCCAAGCCACCTC 101577 36 100.0 30 .................................... AATATCGAGTTTGGAGAGATCGACAAAGCC 101643 36 100.0 30 .................................... TCAGCACCTGCAGCAGCAACTTCGCCTCAT 101709 36 100.0 30 .................................... GAAGCCCGGTGACGATCCCCAAGCCACCTC 101775 36 100.0 30 .................................... AATATCGAGTTTGGAGAGATCGACAAAGCC 101841 36 100.0 30 .................................... TCAGCACCTGCAGCAGCAACTTCGCCTCAT 101907 36 100.0 30 .................................... CTTGCACGACCGGCATGTGAGCGCGCACCC 101973 36 100.0 30 .................................... CGCCGTAATGCGAGGCCCAATCGTGGACCG 102039 36 100.0 30 .................................... TTAGCTTCGTCTGCGGAAAGCCCCGCCGCT 102105 36 100.0 30 .................................... TGCGGCCAATACCGAGAAGCATTCCGGCTC 102171 36 100.0 30 .................................... TCCGCCCACGGCTCCTATCACGGCTCTCTG 102237 36 100.0 30 .................................... TAGCGCGGAAAACGATGGATCGGCGGCACT 102303 36 100.0 30 .................................... CCGCGAGGACGTGGCCGCCTATGCCGCGGC 102369 36 100.0 30 .................................... TTCACCCTCTCCGCACAGAACAACACCCTG 102435 36 100.0 30 .................................... GCGGCTCGCAGACCAAGCGAACGGCGTTCC 102501 36 100.0 30 .................................... AGGCGCGGCGATGGAAGCTTTCGTGTCGTC 102567 36 100.0 30 .................................... GGTGCGCGACAGATAGCCGATATCGCGGCC 102633 36 100.0 30 .................................... CTTGAGGATGTTCTGAAGCCGGAATACTGG 102699 36 100.0 30 .................................... CGCCCTAGAGGCTTTGACCGCGATACAGGG 102765 36 100.0 30 .................................... CGTGAACAAGCAGAGGGCTTCGGCTTTCTC 102831 36 100.0 30 .................................... CCGCTTCCGTATCGCTTCAATCTCTTCGGC 102897 36 100.0 30 .................................... GAGCGCCACGGTCTGCCCCTCCGCGACAAG 102963 36 100.0 30 .................................... GCGTCACCTCGCGCATCCCCGCGAGCCCTC 103029 36 100.0 31 .................................... TGAGCGTGAGTGTCGCTCTTGTACTCGCGGC 103096 36 100.0 30 .................................... CCAGCGTTTGAACGCTTGCGACGGATGACG 103162 36 100.0 30 .................................... CCCGCTCCGCACGTTGGCGGACGTAACCGC 103228 36 100.0 30 .................................... GCGCACACTCGCGCATGCCCTGATGCGGCA 103294 36 100.0 30 .................................... CGAGCTTGAAGAAACCCTCGGCGAGGCAGG 103360 36 100.0 30 .................................... CCTACCTCGGTGTGTCGGATAACCCGACAC 103426 36 100.0 30 .................................... CTTCCTGAAGGATCAGTAATTACTTGTAAG 103492 36 100.0 30 .................................... GCTGGTTGCGGAGATTGCATCGGAGCAGGC 103558 36 100.0 30 .................................... GTCCCTCAAGCGAGACATAGCGGCTGGTAC 103624 36 100.0 30 .................................... CGACTCAACATTGCCTGCTCACTCTTTATG 103690 36 100.0 30 .................................... CGGCCACCATGCCGCCATCGCCCTGGTGCC 103756 36 100.0 30 .................................... GGTCACTTGCGACATTGACCACCTAGACGC 103822 36 100.0 30 .................................... TCTCTGCATCCTTGAGGATCATCGCCTCAT 103888 36 100.0 30 .................................... CGGACGCCCGGATGGCGAGCAGCGTGTCGC 103954 36 100.0 30 .................................... AGCCCCGAGCCACGCCTGCCGCCATGCGCT 104020 36 100.0 30 .................................... GGTGCAGGTCGCGCTCCACCTTGCCGCCAT 104086 36 100.0 30 .................................... ACGCCGACTATAGAGGCGCTCGTGAAGCGC 104152 36 100.0 30 .................................... CGTCGAGGTTTCGGAAGCCGATTACGCCGC 104218 36 100.0 31 .................................... GTAGCAATGGGTGAGACACGCAATCTCAACT 104285 36 100.0 30 .................................... GCGCCTCGCTCGCAATGATGTCCGCATAAT 104351 36 100.0 30 .................................... TGACGCCGTTGCGGTAGGTCAGCACCTCGC 104417 36 94.4 0 ...............................G.C.. | ========== ====== ====== ====== ==================================== =============================== ================== 49 36 99.9 30 GCTGCGGATTGCGGCCGTCTCTCGATTTGCTACTCT # Left flank : GCTATATGCGGAATACGGGCGTCAATCGGTCTGCCTTGCAGGTACGCTTCAGAACAGCGTGACACATGCGCACCGGTTGTCGATAGCGTAAAGTGAGCTAAACTCGTCTGGTGAGACAGTGACGGCTCGATTGAACCGTTTCACGTGATCGGTCATGAAGGCGGCGCGGCGAGTGATTGACTTCACTGCGGTGCGGGGGACCTGTGTCGCATCCTGCGCGAGGGCTCTCCGGGAGACGGCGTCAAACGTCCGCATGGGCCTCCGGCATGGATTTCGAGACCGGCCTATTCCCGGCACGGATGGAACGCGGTCCTCCTCTGCCATGCCAAGGCGTACCGTACCCCGGCGGCTATACGTACTATGGAGGGCAATCGGCGGAAGTTGGTGCACCGGGGAAGGTGAGGATACGTACTGGACTATTTGCCTGCAAATGTCGCGCGATTAGCGCGGAACGGCTCTCTGGCCTGTCCGCGGGCGGATCAGGCGGTAGAGCCGTTTTC # Right flank : TTCCGGCAAGCCATTGAAATGGCACACGCTTTCGCCCTTCCATGCTTCAAAAAAGCTGAAGCTGGGAGGGTGATTGTGTTGTTGGTTGCCGCTTTTTCCCGACATAGACCTTGATCCTTCCGAATTGGTTGTCGGTAATCGTCAGGAATCTGACCTCACCTTGAGCGGGCACAACAGCACCCATTCGCTTCACATGAACTTCCGCATTCTCGATTGAAGCGCAATGCCGCGAGTAGACCGAATACTGCATCATGGTGAAGCCGTCTTCCAGCAAGTCCTTCCGGAAGCGCGCATAGGCTTTGCGGGCCTTCGGTGTATCGGTTGGAAGATCGAACATGGCGATAACCCACATTGAGCGCCACCCCCAAGGCAATTGAGGAATAGGGCGCGAATGGGCCATCATCCCTCTCCATCATTGTCGAGAAGATCGGGCGCAAGCGGCATGCCTTCGGGCAATGCCAGTGCCGCTTCACCTCCCGTCAACGCGCGGCACAGCGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGGATTGCGGCCGTCTCTCGATTTGCTACTCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,12] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGGATTGCGGCCGTCTCTCGATTTGCTACTCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.30,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //