Array 1 9690-10449 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSEK010000043.1 Klebsiella pneumoniae strain Kpngiani7132498, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9690 29 100.0 32 ............................. GCTGTCAGTACTCAACGTTATAGAAATTCCTC 9751 29 100.0 32 ............................. GAGTGAAAGTGATAGCAAGAGTGTAATGGCTA 9812 29 100.0 32 ............................. GCAACTATTGCCTGCATTGCTGTAGACAAATC 9873 29 100.0 32 ............................. AATCAATACGCCCTGATGCTTAAAAATGGCCG 9934 29 100.0 32 ............................. AGCAACGTTTCCGGATTATATGGCTGGAACGT 9995 29 100.0 32 ............................. TGGTGCTCTCAACCGTCACCCGCTGGCTGGAA 10056 29 100.0 32 ............................. TGGTGTTGTCCACGGTTACCCGCTGGCTGGAA 10117 29 100.0 32 ............................. TCGTGTTGTCCACGGTTACCCGCTGGCTGGAA 10178 29 93.1 32 ............CA............... AGGTATTTGACCTCATCCAGAAAGGCACAGAC 10239 29 93.1 32 ............CA............... GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT 10300 29 96.6 32 ..............A.............. TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA 10361 29 89.7 32 ............CA...........A... CACTACCAGATCCGAATGGACACCCGTAATGA 10422 28 82.8 0 ............CAC.......-.....A | ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.6 32 GTATTCCCCCCGTGTGCGGGGGTTATCGG # Left flank : GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA # Right flank : ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCAAATCTTGCAGGTTGCAATCAGCAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCAATAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGATCCAATTTATACTGGTTATATATACAGTGTTTTTAAGTGATCGGAGGTTGTGCCTATGTTCTTAATTCCAATGGAAAATCCTGAGAAAATCGCCATCCCTTTATTTCTCGAGCGGTGTGCAGCTGGCTTCCCCAGCCCTGCCCAGGATTATACTTCCAGTGAGCTAGACCTGAACGATTATTGCATCAGGCATC # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCCCGTGTGCGGGGGTTATCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 87309-89836 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSEK010000007.1 Klebsiella pneumoniae strain Kpngiani7132498, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 87309 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 87370 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 87431 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 87492 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 87554 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 87615 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 87676 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 87737 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 87798 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 87859 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 87920 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 87981 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 88042 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 88103 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 88164 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 88225 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 88286 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 88347 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 88408 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 88469 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 88530 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 88591 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 88652 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 88713 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 88774 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 88835 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 88896 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 88957 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 89018 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 89079 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 89140 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 89201 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 89262 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 89323 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 89384 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 89445 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 89506 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 89567 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 89628 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 89689 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 89750 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 89808 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 42 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //