Array 1 12579-14265 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZNO01000048.1 Lactobacillus jensenii IM11 contig_48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 12579 36 100.0 30 .................................... AAATTTTTTGGAAATTTGGGAAAATGACGG 12645 36 100.0 30 .................................... TATACAAAGGACTGGACTACCCGGTGTGAA 12711 36 100.0 30 .................................... ACGGTCTTAAGCATGTTTGTTCAAAGCGTA 12777 36 100.0 30 .................................... TAATGTTGCAAAAGGTTTTTCGAATCAAGA 12843 36 100.0 30 .................................... ATCATATATTTTTAGACCCCGAAGCCCTAG 12909 36 100.0 30 .................................... AAGTGCTGGAGGTAAAGGTGCAACTGGGTT 12975 36 100.0 30 .................................... TGGTGCATTACAATCAATGCGAAGTGCTGG 13041 36 100.0 30 .................................... ATTTCCCGTCGCAAGTGCTGACCCTTATGG 13107 36 100.0 30 .................................... CTCTATCTACTTTTATTTCATTGGCTAAGT 13173 36 100.0 30 .................................... GGCATACTCAAACAACTACAGTAAATTTAC 13239 36 100.0 30 .................................... CTCAGATGAAGAAGACAAAGACAAGAATGT 13305 36 100.0 30 .................................... TTACACCTCCATAAAAAATAAAACCAGTGG 13371 36 100.0 30 .................................... GGTCAGCTTGTGGTAAAAGAGAAATTATAA 13437 36 100.0 31 .................................... TCAACATCCCTCAATGAAAGGATAACACAAA 13504 36 100.0 30 .................................... CGATGAAGCAAGCACAGCTAACAGCTTGAA 13570 36 100.0 30 .................................... TTAACTCCTAAATCAGATCCATTAATAAGT 13636 36 100.0 30 .................................... CGAAAAAGTAACAGTTGCATTAGACGATTA 13702 36 100.0 30 .................................... ATATTGCAAAGCAACTAGCAGTAGGAAAGG 13768 36 100.0 30 .................................... TAATGGAAATTTGGGGTATGTAACAATAAA 13834 36 100.0 30 .................................... GACGAACCAGACGAAAGAGAGTTTTCAAAT 13900 36 100.0 30 .................................... TTGATTGACTCCACTCGTTTGCCCAGACGC 13966 36 100.0 30 .................................... ACTAGCAAAAGAATTTACTACTATCACTAT 14032 36 100.0 30 .................................... TAATAATGTAAGCTAATTAATAAGAAAACG 14098 36 100.0 30 .................................... AGCGCCTAAAAGAGCTGCAGTAATTTCAAT 14164 36 100.0 30 .................................... TAAAAGTTGCTTTTTCTTTGATAAAGCCTG 14230 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 100.0 30 GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Left flank : CACAAGATTGTCTTAATTCTTATCTAACTAAAATTATTTCAAATTTATTTGAGAATATAAGTGAAAAGCATCGGAATAGAATATTTGATAAATGGAGGCAACTTAGCACCGATATTCAAGATATAATCTTTATGACTGACTTACCAATTGAAGTCAATGAAAATGTAGATTTAAAAAAGTTATTTAAATTTGATGGAATTCATTTTGATGATTCTGTACTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAATGTAAGTCATTATCTTACAAAAGAACAACTGAATAACTTAATTACCTTTGTAAAAGAAGTAAATGTACCTTTGATATTAATGGAATTTTCATCTCCGAATTTTAAGGTTGTTAGTGGGGATTCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTACAATCTGAGAAGCTGATGATAAAACGTCG # Right flank : CTGTTAAATTTAAAACTACGTATAACAAAAAGTTTTAGAAGGTTGTAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGTATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATATGTTTTTAAAAGTTAGGAATTATCAATTTAACTCTGTATTGACTATAATTATTTTGAATGATAGCATAGCAAGAAGGGAGCTAAGCCTAGCTCCTAAAAAATTATTATTTAGTCATTTTATAAATTACTAATAGTTGAGTGATTATAATCAGTAATTTAATAACAATGTCTAAGCAGTCTTTTATAACGGCTATTCTATAGCCGTTTTTATTTTTGTGCTTTTTGTTTTAAAAGACTAGCGAATCCATGATTTAACGAACTCCGCTATTTGTATAGCGGAGTTATTTTTTCCTCTCAATTTAATACAAGTACCAAAGAACTTTGAAAATAATAGCAATTGGTCTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //