Array 1 17080-14352 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZZF01000058.1 Clostridium beijerinckii strain ATCC 39058 CBEIJ_contig000058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 17079 28 100.0 36 ............................ TTGCAAGATCAACTAAACAGAAAGCTTAGCGATTTT 17015 28 100.0 37 ............................ GAAATATTATCAGTAATAGGTGTCATCATATCGGGAG 16950 28 100.0 36 ............................ GTAATTACCACTAAAATAAAGCTAGGAAATTAACCC 16886 28 100.0 36 ............................ ATTAATACTGAGTGTTATGATTTTCCCTTGTTGCGT 16822 28 100.0 37 ............................ TAGATACATTAAGTTCTAAAAGCTCAACATCAGATTC 16757 28 100.0 36 ............................ TTTAGTGCTTTTATAAAGTCAGATTCAACTGTTTCT 16693 28 100.0 37 ............................ ACAGCAATTGCAAATGGTATTGTCATTTTTAAATCAC 16628 28 100.0 36 ............................ TGGTATTTAACATATGGAATTAGATGTGGAAATAAC 16564 28 100.0 37 ............................ TGGAATAATAGGGGGTAGCCCGTAGGGGGCTCCTTTA 16499 28 100.0 36 ............................ ATTAAGAATTGGATATAAAGATTACATTTTAATAAA 16435 28 100.0 36 ............................ TCATCAAATATTAGTGTTTAATTTCATTCGTAATTC 16371 28 100.0 36 ............................ ATGATTGACCCAATTTCGATATACTCATAACAAATG 16307 28 100.0 37 ............................ GATACTAACACTGTTCCAAATACTGATGATACAACAG 16242 28 100.0 36 ............................ TAATATCAGGGTGTTCTTTTCTGACCCTTGCAATAT 16178 28 100.0 36 ............................ GAAGAATCAAATAAATTATATACATCATAATAATGT 16114 28 100.0 36 ............................ GTGAAATGCGAATAAGCCACTGGATAGCCAGTAGCC 16050 28 92.9 36 .....GC..................... GGAGCAATAAGAAGAGTTGTAGATTGTATAATTCTC 15986 28 100.0 37 ............................ TTCATCCTGTTGCTTGGATAATTCTTTTTGCAAGTCT 15921 28 100.0 36 ............................ TTCAACATATAAGGTTCTTTACTAACAGGAGTAACA 15857 28 100.0 35 ............................ ATGTATTTAATAATAGTGACTATTCATGTAGGCCA 15794 28 100.0 36 ............................ TTATCTATAGTATATTCTTTTACCATGGTAGCCCTT 15730 28 100.0 38 ............................ TCATCTGGATCTTGCGCGAATAGACCTATTTCACAAAT 15664 28 100.0 35 ............................ TCACTATCAGGAGTTTGAGTAGTACTTGGAAAAGG 15601 28 100.0 36 ............................ CTAAATAAAGTAATCATTTAAATAAATTCTCCTTTC 15537 28 100.0 36 ............................ TTGAACAAATCTAGCATCAACATCAAGTATTTTTCT 15473 28 100.0 36 ............................ AGCCTTAAGACAACAGGAGAAGTTCATGATGTGCCA 15409 28 100.0 36 ............................ GATTTAATTTTAGCTGGTGCGCTAATTTTTGCATTG 15345 28 100.0 38 ............................ GAAGACAGACCAGAAAATCCAATTCAAGGTGCTGATAG 15279 28 100.0 35 ............................ AGTGTAAAAGACATGGCTTATCTTACTGCATATGT 15216 28 100.0 35 ............................ GATATTCTTTAGGAAGTTTTAGATTAGCTGAATTC 15153 28 100.0 35 ............................ GCCATTGAAGCATTATAAAACTCATTTCGACTTAT 15090 28 100.0 37 ............................ CTTTTAAACGAATAAGTCGCGACATCGCGAAAAAATG 15025 28 100.0 36 ............................ ATGCAAACAGTCTTTTTAGCCAAGTCTTTAAGTGAA 14961 28 100.0 36 ............................ TTGTTAATCCAGGAAGCTTATTTGAGGTCAATTTAC 14897 28 100.0 36 ............................ ATTGTTATGGCGGCTAAGAAAGCTGATGAAGATGGT 14833 28 100.0 37 ............................ TGTAAATTAGCTGGTGCAATTCAATACGTTAATATCG 14768 28 100.0 36 ............................ ACAGGAAAAGACGTAATGAACAGTATGGAAAATACT 14704 28 100.0 37 ............................ AAAATTAAAGGTGCAGCCTTAATTAGAGGATCGGCTT 14639 28 100.0 37 ............................ CGATAATCACACTCTACTTGTTTTATATCGCTTGTAT 14574 28 100.0 37 ............................ TTGTTTCCGTTCTAGCTACTTTTATGGCTCTATTTCT 14509 28 100.0 37 ............................ AGTTTGGGATATGATCTTAGTGTGTTAATTACTTTTT 14444 28 100.0 37 ............................ TTAGCACAATCTACTGATAATACTTTAAATAATACAA 14379 28 96.4 0 ......................C..... | ========== ====== ====== ====== ============================ ====================================== ================== 43 28 99.8 36 GTTTTATATTAACTAGAGGAATGTAAAT # Left flank : ATTAAGCATCTAATAAAAGATGAAAAATATAAGCCATTGAAAGCTTGGTGGTAATGTGTTTGTAATAATTACTTATGATGTTAATGAAAAAAGAGTAAATAGAGTTAGGAAAGTCTTAAAAAAATATATAACATGGTGCCAAAATTCAGTCTTTGAAGGAGAAATAACTGAAGGAAAATTAACAAAATGTATGGCAGAAGTTAGGAAATATTTGATAACTTCAGAAGATTCGTTATATATTTATAGAATTCCTTATAGTAAAAATATAAAAAAAGATGTTATAGGTATAGAAAAAATCTCAGATGATTTATTTATATAATTGCAGTAAGCGATCTTTATTATAGAATCAATTCAAAGATAGAATTTAAGCAGGCTTTAGCCACTTTTGTTTAAGAAATGAAAATCACTACTGTAGCTTTACTGCAAAAATTTATGTTATAATATAAAAAATATTATCTAATGTGGCTAATATAGAGGGGTTTACCTTATGTATTTTTGGG # Right flank : ACGCAATCGAAAATAATTAAATAATTTTAAAAGCTTATAAATAACCAAGATTAGTTGCCACAAATCATAAACAATAACTAAAATTAAAGAAAATTTAAATTTATTTAGATTTTATGTTTACAAAATGGAAGAAAAACTTCTTTAAGTATATATAAGGCAAATGAGTTAGCTAACCTCAAAAGCTTAATTAAAATTATTTTTATATTTTAGGAGGCAAAATTATGGGTTATTTAGGAATTAACATGTCAGGATCAAGTATACCAGTATATTCTACAAATATTGAGGATAACACAAGGATAGGAAGTTTGGGATACAAAGAACGATTTGCAGTTACAAGCAGTGGACCAATTGCAATAGTTATAAAGTTTGTAAATTCTTCAGGAAATTGGGTTGATGGTAGACTGGATGTAAATGCTGATATTAGCGATTGGTGTGAATATTTATTCGTACCAGGTGCTATAGCAGCAAGAGTATTTCATACAGATAGAACAATAGATATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTAGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //