Array 1 169878-170638 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRUK010000002.1 Flavobacterium muglaense strain F-60 Seq2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 169878 36 100.0 30 .................................... TATATCGGCACCTGCAAGTGTTCAATCATT 169944 36 100.0 30 .................................... AACGTATGATAGCAAAGGACTTGTAACAGC 170010 36 100.0 30 .................................... AAAAGCCCGAGAAATATGCAAGGATAGAGG 170076 36 100.0 29 .................................... TAGGAGAATGGAGGACAGGAGCAATTCAA 170141 36 100.0 30 .................................... ATACGCTTTAATAGGTTGCGTGTCTTGTTG 170207 36 100.0 30 .................................... AGGTACACGTTTTGAGAAATCAATGCAATC 170273 36 100.0 30 .................................... CACTTGCCACATTGCACGTAATGAATACCC 170339 36 100.0 30 .................................... TCACGCTCGAGCTAGTCGAAGCACATTACC 170405 36 100.0 30 .................................... CAAATCCATTAAGTAAAAAATAAGCTGTTA 170471 36 100.0 30 .................................... TTACTTTTATGTCATACAAACCAGCCAAAC 170537 36 100.0 30 .................................... ATATTTTATTATTTCAACCGGAATACAACC 170603 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 100.0 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TATTGATGCAGGGTCATATTACAGATTAGGTAATGAAGAAAATAAACTGAAATATGATATAGTAACCAATCCTCACGATAAAACTGGATTACCATTGAAGTATATTTTAAAAAAAGGATTGATGGTTTTGTTTTTCAAAGAAAATTTTCAAGAAATATTAGAATTACCCACTAGTGATTTGCATAATAGATTATATAAATTAGCTAAGTTTGACGCCCAAGGAAGATTAACTTTTAGGACTCATTTTGAAGCCCGACAAGCTAGTGAATTGAAAGAAATTTATAATGTAGATTTTGAGTCCCCATTTGAACAAATTAGATTGCAAGTAAGTAAACTAAATATGTTAGTTGAAGGATATGAGTTTGTATTGACAGCTTCTGGCAAGATTACTTTCATTTAAACAAGCTAATAGTTCTTTGACATTTTGTTCAACATCTTAAACATCTCAAACCACAACTGAAAGGGATAGCATCCGCCCAGCAGGGATGCAGTCGCTTTCA # Right flank : TAGTTGGCTTGTTACCTTCTGATAATCATGGGATTAAAGTAGGTATCGTATAAAAAAAATGCCTCTTTATTGGTTTGATAACCCAATATTGAGGCATTTTTTTATTTGTAAAGTGTTGTCTTCTAAATTATTGGTACATTTGTATAAATATTTATTCTATGAGAGTTGTAATTGAAGCTAGCGAGCAATATAAATCCTTTTTAATAGAGGTGGCAGAGGCAATTAAAGCAAAAATTTCATTTGATGATAAAGATGCTTATGAGGATATTCCTGAACATGTTAAATTAGCCGTAGAAGAAAGTCAAGTACAATATGAAGACGGGAAGTACACTGATTTTTCAGTTGTAAAAGCTTCTCTTTTGAGTAGGCTACACAAAATGTAAGGATGCGAATTGTATTAACTGATAATGCAAAGTTTACTTTGCAAACTATTTTTGATAGTATCGAAAGTAGGTTTAGTCCCAAAAGAGCAGACACGTTTTTACTTGAAGTAGAAAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 23912-23520 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACRUK010000034.1 Flavobacterium muglaense strain F-60 Seq34, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ======================================================= ================== 23911 25 92.0 48 .........A.A............. GACTTTGAAAAAGGGAGCCATCGATAAGTATATTTAGCTTTTATATCT 23838 25 100.0 55 ......................... GATTTCGTTTTTTTGTATCGAATGAAAAAAGCACGCCCTAAGCAACAACTTGAGC 23758 25 100.0 49 ......................... GATTTTGGGAAAAGAGAAGTTATCGCTTCCTCCTCTAGTTGTTTTAAAT 23684 25 100.0 41 ......................... CTTTTTAGCTATCATAACAAAAAACGTGTTACATCATTAAG 23618 25 100.0 49 ......................... CTTTTTGAAAAACCGAAGCCATCGATGATTACATTTAGCTTTTATATCT 23544 25 88.0 0 G..........A............C | ========== ====== ====== ====== ========================= ======================================================= ================== 6 25 96.7 49 TGTCAAATCGAGCGGAGTCGAGATT # Left flank : AGCACGGGTGCCGAATCTAACTGAAGGTCGCTTGTGGCTATGGCTGGAAGGTCACGGCTTATTTTAAGGCCGGCCAGCGGTTGCGTTTTTGTTTTTTTTGGGTTGTCAATAACCAGATCACTAAAGGTTTGACTAATCAATTTATAACTCACTATATTGTAATCTAGATACCAGCAACGTAACGATTGGCTATAAACAGCTCCCAATTGTTTCAATTGAGCAATTGTAGCACTGTCATACTTAAAAAAAAGTCCAATTCGATCCGCATCGCGATGCCATATCTTTTTTACAATTATTTGCATATCAAGATTATAATGCAACTAAAATACTACTTTATTTTAAATAATACAGTATTAATAGGTTGATTTTTAATAGGCTATGATTTTTATTTATGAACAGGTAGGCAAGTCATAATTAAAAGTAAAAAAGTAAACATTAGATGATTGAAATACAGTTGCGTTTTTTCGGTATTTAAAGTATTGATAAACTCTTTTTTAAAT # Right flank : ATCTCCGTTACTAATGAAATAAACGGATCGTGCGTGTATGCCGAGTTGCGTGAAGGATAGCAACGGAAATCCTTTTATTTTTTTTCTTTAAAAAAATAAAAGATTGCAGTGTATAGGTACTATCTTAAAATCCTAATGATTTTCTTTTAATTTTTATATATTTGTTAAACTATAGAAAGCGTTTCATTTTCAATAATGATTTGTTTATCTGGTATAGCCTCGACTTGATTGGGGCTATTTTTTTTGTTTTTCTCTTCATTTAAAAGATTGGTTATATTTTCTTGCTGTTGATTGATTTTCTCTAAATAATTTGGATCATATTCCTCATTTTTTTTCCAAATATGGTATATTAGGACCAATAGTTTTTTTTGCACAGCAACATAACTTTTCATTTTGATCCCATGTTTTTCAATGGTTCGATTGTATAAATCTATTGCTGGTTTTTCATGATGTTTAACAGCTACAAAGGCTGGCATAAATAATGCTCTTCTAATATGACT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:-0.22, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTCAAATCGAGCGGAGTCGAGATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //