Array 1 2886024-2884559 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031416.1 Gallaecimonas mangrovi strain HK-28 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2886023 28 100.0 32 ............................ AGACAACGAAATGGCCAGAAACCAACCCAAGA 2885963 28 100.0 32 ............................ AAAACAAGTGTCACAGGTGCCAGTTAGGTGGT 2885903 28 100.0 32 ............................ ATTGAAAACCTTACGGATATGATAGGCGATAA 2885843 28 100.0 32 ............................ GCCGAAAGCTTGAAGACTTGGGCTTTTCCCAC 2885783 28 100.0 32 ............................ ATCTGTTGCGGATAGCTTGAGCCGCCCTGCAA 2885723 28 100.0 32 ............................ TTCGAGGCTCGGGCGGCCCCTGTGATTCTACA 2885663 28 100.0 29 ............................ TCCCCCTTCCCCAAACCCTTCGCATGAAC 2885606 28 100.0 32 ............................ AAATTGAGACGATGAAGCATAGGTTTCATTCA 2885546 28 100.0 32 ............................ TTAAGCGGGCACGGCGCCGTCGTTTTCAAGTT 2885486 28 100.0 32 ............................ GGCTGGCCTATTAACCTGAACGCGATCAAGTC 2885426 28 100.0 32 ............................ TCGGACACCAGGCCCCGTTCAATGCCGGATGT 2885366 28 100.0 32 ............................ GCCAGAGTATTCCATTAGCATTAGCGAAATTA 2885306 28 100.0 32 ............................ ATTGATACAATCGCAGTTCTCCATCAAAACTT 2885246 28 100.0 32 ............................ AAAGACTGGGGAATAACGGTATACGTTTCATC 2885186 28 100.0 32 ............................ TTCCGCTACCGGCGCGGCTATTGATTACAGTT 2885126 28 100.0 32 ............................ TTGCTATACCGCCCTCTTGGTCAGCCGCTCTG 2885066 28 100.0 32 ............................ ATCAGCGCACGGGCTTTGGCCAAAGGATCGCC 2885006 28 100.0 32 ............................ ATAGAGGATGCTCTTGATATATGGGAATCGTT 2884946 28 100.0 32 ............................ TTTCAGGCCCATTTTATGGGTTGGCTTTGGGC 2884886 28 100.0 32 ............................ AACTCAATACCGTTGATGGTTTCAATTTCATC 2884826 28 100.0 32 ............................ TTTCAGGCCCATTTTATGGGTTGGCTTTGGGC 2884766 28 100.0 32 ............................ TAATGCAAATTTCCATCTGGAACCTCCACCGT 2884706 28 100.0 32 ............................ ATCCAACCGGCGTTAGCCGCGCCCCAAGCCAC 2884646 28 100.0 32 ............................ CGAAAGCTGGCGCTTATTCAGGAAGATGCAGA 2884586 28 92.9 0 ........................A.G. | ========== ====== ====== ====== ============================ ================================ ================== 25 28 99.7 32 CTTCACTGCCGCCCAGGCAGCTAAGAAA # Left flank : AGCCCCTTGATATGCTGATGGCCGAGCCATGGCTGTTGGGAATGCGCGACCATACCGAGGTAGGTGCCATTGCGTTGGTGCCTGACCATGCACAATACCGGCAGTTAAAGCGGGTACAAGCCAAAAGCAGCCCAGAGCGGCTTCGCCGCCGCAGCATCAAATGTTTGGGTATCAGCGAACAGGAAGCCAAAGCGCGGATCCCCGACAGCGCTGCTAAATGGCTTAACTTGCCGTACTTGCAACTGCAAAGCGGCAGTACCGGCCAGCGGTTTCGCCTGTTTTTAGAACTTGGGCCATTGCAGCAGGCGCCGCAGCCTGGCCTCTTTAACCGCTACGGCTTAAGCCCATCAGCCACCATCCCATGGTTTTGACCCTTTTTTAAAAGCTCCATAGAGGCCTTTTAAAAACAAAACCTTACAGCGCAGCTTTAAAAAAGGGCTGCGCTGGCCTTTTGCACTATTGCTCTTTAACAATCAGAACGTTAGGTTAGACAGGCTCTA # Right flank : TCAGGTGGGGTGGTCGCAGATAAGAGACGTTAACGCGTTTTAATTAAGGTGCAACACCGCGACTGGCAGGCCTTGGCTTGCCAGTGTTCTTAGCCAGCGCTTTTGCCCTGGCTGTAGGCGATCGCCGGGGCCTTTGACTTCCACCAGCCGGTAACCGCGCTCTTCCACAACCAGCAAGTCGGGAAAGCCGCTGCGGTGATGGCGTGGGTCGGCAAGATAGTGGCGAAACCAGGCCACTAAATGCGCGCCGCTAATATGGCGGCAAAGGGCTAAGCGCTGCTCGGTCCAAAACGGCCACTGCACTAAAGCGTTGGCAATACCGTATTTGTTGGCAAAGGTGATGTGGGCGCGCTGCTGCCAGCCGCTAGCGATGTCGGTTAGGCGCTGGTCAATAAGTGCCTGGCGGCGTGGGTAAAACTGCTGGCTGAATAGGTCGCGCGGGCCACGTTGAAAGGGGTGAAAAAAGGCGCCCGGTATGGGGGCAAAGATAATGTCCCAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCCCAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGCCCAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //