Array 1 63186-62575 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNIK01000012.1 Pseudomonas cichorii strain ATCC 10857, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================================= ================== 63185 28 100.0 32 ............................ CAGGTCGAAGCCAAACAGCAAGCAGAACGCAT 63125 28 100.0 32 ............................ CACAGCATGCCGTGGCGCTGGCCGCGCTGGTG 63065 28 100.0 32 ............................ TGACGGAATGCCAAGGCCAGCAACTGGAACGC 63005 28 100.0 32 ............................ AAGGATGAAGCCATAGAGCGCTGAATGCGCAA 62945 28 100.0 32 ............................ AAGGATGAAGCCATAGAGCGCTGAATGCGCAA 62885 28 100.0 32 ............................ AAGGATGAAGCCATAGAGCGCTGAATGCGCAA 62825 28 100.0 32 ............................ GACAAAGGTGTTCATCAAAGCCGACAAGGGTC 62765 27 82.1 135 ..........-.........TGA....G ACACTCTGCTCGATAACTCTCCGTATTCAAAGAAAAATATGCGTTTGAGGCCGTTTTACCCCTTTTTTCATCACGCTTTGTAAGTGATTGATTTTTAAAGGATGAACCCAATGTGAAAAAAAGAGGGTCCAGAAA C [62750] 62602 28 85.7 0 ......G....C.C....C......... | ========== ====== ====== ====== ============================ ======================================================================================================================================= ================== 9 28 96.4 45 CTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : AGTCAAGGTGGTTAGAGCATCAACCGCTTAAATGATGGGTTTGAGGGTAGTCGAGAGTGGGAGTGTTTGCCGCTGAGATATCTGGGTGAGTACGGGCGGATTTATCCGCGAGACGTCACTGAAGACAATGAATTTCATGTGATGAAAGGTTCATCCCGCAGACCCAACCCCGTGGGAGGGTCCTTGGCCGCGACAGCTTTCACACAAAATATGTCCGGAAATGGAGCTTTCCAGGCTGTCATGTCGCAATTTCCGTTTTTTAGCGACACGTTATTGGGTCATGTCGTTGGCGACGACCTATCAAAAAGCACGGCGCTGTCGCAGCATATGAATATCTGGCCACGGCAGACAGGAATGAACCCTTTTCTGACCCTCTTTTTTTCACCATAGGTTCGTCCTTTAAAAATCAAAGACTTACAAAACTTGATAAAAAAAGGGGTAAAACGGCTGCAAGCGCATATTTTTCTTTGAAAACGGAGGGTTATCGAGGAGAGTGTCTA # Right flank : ATCGACTCAGGCAGGCATCGATGGAAACCGCGACCAGTCGCCAGCAAGCTGTCTCCCACGGTGCTCTGACCTTAACGCATACAGAGCCAATTCATTCGCGAAAGGTGTTTGAATACGGCTTTCCCGGATGAATCCGGTCCTGCATATGTTTGAAGGCCACCCTGCACAAACCTTCTAGACTTCCCGTCTCCCATACGCGATAACACTCAACCCGACCCCAAACCCTGTAAGCCCACCATGACTCAGAGCAACTGGATCAATCTTGCTCAGGACCGCGACACCGGTATCGAGACGTTGCATGCCCATTTCCAGGGGAATGCTCATGTCTACGATCCGCATTGGCATGACAGTTATCTGGTGGGTGTCACGGAGCAAGGGGTGCAGCAGTTTCATTGTCGGCGGCAGCGTTATGCCTGTACGCCGGGGCAGGTGTTCATGCTGGAGCCGGGGGAGATTCATGATGGGGATGCGCCAAGCGCAGACGGTTTTACGTACCGGAT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //