Array 1 16089-12937 **** Predicted by CRISPRDetect 2.4 ***
>NZ_JAJAAC010000002.1 Acinetobacter baumannii strain AB169-VUB NODE_2_length_99466_cov_24.818329, whole genome shotgun sequence Array_Orientation: Reverse
Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion
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16088 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG
16028 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA
15968 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC
15908 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT
15848 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG
15788 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG
15728 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA
15668 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT
15608 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA
15548 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT
15488 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT
15428 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA
15368 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT
15308 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT
15248 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG
15188 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG
15128 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG
15068 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC
15008 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT
14948 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT
14888 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG
14828 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA
14768 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT
14708 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC
14648 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG
14588 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG
14528 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA
14468 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT
14408 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC
14348 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA
14288 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA
14228 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA
14168 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT
14108 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG
14048 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT
13988 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT
13927 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA
13867 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA
13807 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA
13747 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG
13687 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA
13627 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT
13567 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA
13507 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA
13446 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT
13386 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA
13326 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC
13266 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT
13206 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT
13146 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG
13086 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC
13026 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT
12966 30 70.0 0 ...T...A...T.....T..C...AGCG.. |
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53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT
# Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA
# Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC
# Questionable array : NO Score: 5.35
# Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31,
# Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT
# Alternate repeat : NA
# Directional analysis summary from each method:
# Motif ATTGAAA(N) match prediction: NA Score: 0/4.5
# A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT]
# Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5
# Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37
# Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41
# AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27
# Longer leader analysis prediction: NA
# ----------------------------------------------------------------------------
# Final direction: R [0,5.28 Confidence: HIGH]
# Array family : I-F [Matched known repeat from this family],
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