Array 1 249195-253122 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJNA01000002.1 Klebsiella pneumoniae strain EuSCAPE_HR088, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249195 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249254 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249315 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249376 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249437 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249498 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249559 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249620 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249681 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249742 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249803 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249864 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249925 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 249986 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250047 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250108 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250169 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250230 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250291 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250352 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250413 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250474 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250535 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250596 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250657 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250718 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250779 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250840 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250901 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250962 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251023 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251084 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251145 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251206 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251267 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251328 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251389 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251450 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251511 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251572 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251633 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251694 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251755 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251816 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251877 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 251938 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 251999 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252060 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252121 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252182 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252243 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252304 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252365 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252426 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252487 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252548 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252609 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252670 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252731 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252792 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252853 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 252914 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 252975 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 253036 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253094 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //