Array 1 2153036-2157973 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024703.1 Fusobacterium pseudoperiodonticum strain KCOM 2305 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 2153036 36 100.0 36 .................................... ATATTGTTCAATTTTTGAATTATATGTCATATTTTC 2153108 36 100.0 37 .................................... TCATCAAAAATTTTATTTCTTGAAAAAAATTCAATAA 2153181 36 100.0 43 .................................... TTTCTAAGATACTTATGTTTGTATTTATACCTATTCTAGCTGC 2153260 36 100.0 38 .................................... TTATCATCTGTATATTCATTTGTAAAAGCTACAATAAC 2153334 36 100.0 42 .................................... TTTCTTTACTCTCACAAGTCAATAAATTAAATACATTTCTTT 2153412 36 100.0 41 .................................... AAACTCTTTATTAAAATTGTATTTTCTACCGATACAACTTT 2153489 36 100.0 39 .................................... TATGAAGAAGACGAACTTTATAACTATTATTTTGAAATA 2153564 36 100.0 37 .................................... TCTAAACCACCTAAACCATTAATTTTAAACTCTTTTT 2153637 36 100.0 38 .................................... TCTATTAATTCTTCTAAACTATAGTATACATCTGCTAT 2153711 36 100.0 40 .................................... TGTTACTAGCCTCAGATAATGCAAGTCCTAAACTTCTGAA 2153787 36 100.0 38 .................................... TATACTACAATGGCTATGCTAATGTATATCATTTATAC 2153861 36 100.0 40 .................................... CAAATTAATGTATCATAGCTATATAACACTTTGTAAATAC 2153937 36 100.0 42 .................................... TTATCTTTAATACTTTATATGTAGAATGTTTACCATAATTGT 2154015 36 100.0 37 .................................... TAACAAGGTGTTTGGCATACGCTGGTTTAGTAGCTGA 2154088 36 100.0 42 .................................... TCTTGTTTTGAATGTTTCACTAGGCTTTTAAAATATTCTTAA 2154166 36 100.0 38 .................................... ATACATCGATATAGATGTAAAAAATGAAATTGTTATAA 2154240 36 100.0 42 .................................... AAGCTTTAAAGTCAAGCCGTTTCATTGATTTTCTATACTATA 2154318 36 100.0 40 .................................... TTTCTATATCACTCACTGCTGCATTAATTTTATCCATTAT 2154394 36 100.0 37 .................................... TCGTATTCAAATTCTACACCTTTGATAATGTATGTTT 2154467 36 100.0 36 .................................... CATTATAATTTGTAAGAATGTTATTTTCATTTTAAA 2154539 36 100.0 38 .................................... TAGATATAAATGCTATTGTATCACTTTACAAGCCACGA 2154613 36 100.0 40 .................................... TTTCTGTTTTTTTTCAGTATACAGAACAAGTACTTTTTAG 2154689 36 100.0 40 .................................... CCTATAAATATATACTTTCGTTATTGGCTATATCAAATAT 2154765 36 100.0 36 .................................... AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT 2154837 36 100.0 43 .................................... TTATCTGCTAAATAAAATCCACCGAATGCGTCATTTTTTACAA 2154916 36 100.0 38 .................................... TCATATTCATCCCCCCTTTTTTATTCAATGGTAAATAA 2154990 36 100.0 40 .................................... AATAGCAATGCTTAAATATATCATTTATACATCACCTATC 2155066 36 100.0 38 .................................... TAATTTAATTCTAATATACTTGTTTTCAATTTTTGTTT 2155140 36 100.0 44 .................................... GTACTAATATATCTAAGAAATTTCCTCCTCTGATAATATCATTA 2155220 36 100.0 36 .................................... AAATTCAAGGTTTTCAAACCTTTTCAATTAGTTTTT 2155292 36 100.0 44 .................................... TTAAAGTTATGCAAATCCTCTTATGGTTTTTGTTTACTTAGTGC 2155372 36 100.0 39 .................................... TGATTTATAACATACATAACCAATTGCCATTATTCCTAA 2155447 36 100.0 43 .................................... GGACATCAGGTAGTCCTAATTGAAATACCTGAAAACGTCATTA 2155526 36 100.0 41 .................................... CTGTTTGTCAAGAAAAATTTTTTTATTCTATAGATTTTTTT 2155603 36 100.0 40 .................................... CTTGCAAGTCTTAAAAAACATTTCTAATTCTTTTATATTA 2155679 36 100.0 40 .................................... TATTCTATCCCACCTATACCATTAATTTTAAACTCTTTCA 2155755 36 100.0 41 .................................... TCATAACGTTTCTCTTGTGTATATTGGAATACTATATTAAG 2155832 36 100.0 43 .................................... TAGTCTTTTTGTCATTATCTTTTAATTGTTCAATTGCATCCTC 2155911 36 100.0 38 .................................... CTGCTAATGTAACATGATTAATACTTGTAATATCCTTA 2155985 36 100.0 40 .................................... CCAAATAACATCGGTGTATATTCGTTATTATCGAATTCTA 2156061 36 100.0 37 .................................... CTATTACAATAGATAGCATTGTCAAATGTAATATTAT 2156134 36 100.0 42 .................................... TATCACTTGTATCAAGCCAACCACCGATATATCCATCTATTT 2156212 36 100.0 37 .................................... TCTGTATAAAAATATCCGTCCATTTCATATTTATCAG 2156285 36 97.2 41 .............................T...... TAGATATTTTTTTTTGAATGTCCATTTTTTCAAGCTTGAGC 2156362 36 100.0 39 .................................... TTTTCTGGGACTTTAAAGCGTTGCTTTTTGTGATGTTGC 2156437 36 100.0 35 .................................... TTAAATTTCTTTTTTATCTAATAAAACGGCTTTAA 2156508 36 100.0 37 .................................... TAAAATAGTATCTATTTCAATATTTAAGATACCATTT 2156581 36 100.0 40 .................................... TAGGAGAAATTGAAAAATTAAGAAATAAGCAATTAAGAGA 2156657 36 100.0 37 .................................... TAAAATAGTATCTATTTCAATATTTAAGATACCATTT 2156730 36 100.0 39 .................................... CAAAAAGTTAATTTTGAACCATCTTTAAAAGTTAATTTA 2156805 36 100.0 36 .................................... ATAATATCTACCTACTTTCTTTGCATACGATTTAAA 2156877 36 100.0 41 .................................... TTTCTTTTTAAAATTTTATTATAGTATTATTAGATATAATA 2156954 36 100.0 40 .................................... TAGATATGTCTACCTAGTTTATAAGTTGCTTTAAATTTAT 2157030 36 100.0 41 .................................... AATATTCCTCCTCCAATTCTCTTACTTCTCTTATAAAGTCT 2157107 36 100.0 43 .................................... GAATTCAGTTTTTTCTAATAATACAGCTTTAAACTCCAATAAA 2157186 36 100.0 39 .................................... TAGACAAATATTCGTCTAACATATAATCATCGTAATAAT 2157261 36 97.2 38 ........A........................... AAGATTTTATCAAAAATTTATATCTCCATTATTCCCAG 2157335 36 100.0 42 .................................... TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT 2157413 36 100.0 42 .................................... TAAAATAGCTATTCCTTTAGATAGTGAGTCTGTAGATGACTT 2157491 36 100.0 40 .................................... GCTATTTATTCATTTTCTAAAGTTCAATCAAGCTATTTTC 2157567 36 100.0 39 .................................... TAATTTCTTATGTGGTGTTATAGTACAGTTTGATTTGAA 2157642 36 100.0 37 .................................... TCACAGGTTAATGTTTCAAACCTTATTATAATTGGAT 2157715 36 100.0 37 .................................... CTATTTATAGTATCTATATTCAAATTTGATTTTTCTT 2157788 36 100.0 37 .................................... TTTCTTTACCAATATCTTTAACCTTTTGTGCTTTTTC 2157861 36 100.0 41 .................................... CCAATGATATACTTATATTCGTATATCAAGTTTGATGCCTC 2157938 36 94.4 0 ................................T.T. | ========== ====== ====== ====== ==================================== ============================================ ================== 66 36 99.8 39 ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT # Left flank : GATATTATTTCTAATAAAAGAAGAATACAATTATCAAAACTTTTAAGTGCTTTTGGTTTTAGAATACAGAGATCAGCTTTTGAATGTTTGTTGACAAGAGAAAAATATAAGTTACTTGTTGAAAAAATTAATAGATATGCCAAAGCTGAAGATTTAATAAGAATTTATCGTTTAAATCAAAATGTAGTAACAGAAATATATGGTGAAAAATTAGAAGCAGAAAATGAAAATAAAGCTTATTATTTTTTCTAAAAATATAGAATCTCTCAACTTAGATTGGGAGATTTTTTATTTGTTGAAAATTTAAATAAAACATGTTAGTATGTAACTACACTGAGAGAAATCCTAAGGTTATAAAAAGATATTAGTTAGACGATATGTAAAAAATGAGGAGTTAAAGATGCTTTTAACTGAAATAAACAAAAAAATTTCAAAAATAAAAATATCACACGATAACATTCTAAAAACATATTGCAATAAAAGACTTTTTTGACCATAGG # Right flank : TGTTACCATAATTAAGTAATCTAAACTTCTATAAAAATTGATTTATATGTTAAACTGTAATAGTTAATGAGGTTATGAAATGGAAGTTAAAAGTGGAAATGTTTTAACTTTTTAGAATGAGAATAATCTTACAGAGCCTTTTGAATTTTTATGAATAAGAGAATTTTTTTTAAAATTTAAAATTCTTTTTTTGTTCTACATAGCCTTTATTTTTTGAAAAATTAGATAAAAGATAGCAATTGAATAATATCTAAAAAATGAGGAGTTAAATATACTTTTATTTTAAATAAATCAAAAAATTCTCAAAATAAAAATACCAGATGGTAATATTCTAAAAATTTATTATGATACAATTCTTTTTTGAATATAGTATAAAAGTGAATATAACTTCATAAGGAGACGGAAACACACCTACCTTTCAATATATAAAATAAAAATAAATATTAACCAATAAGAATGAATGATACTCCGTAAGGAGACGAAAACTCCCATAGAATTCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAATGAATGATACTCCGTAAGGAGACGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.60,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 2158682-2158344 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024703.1 Fusobacterium pseudoperiodonticum strain KCOM 2305 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================ ================== 2158681 31 100.0 46 ............................... TATTATAGTGTAGTAATTCATGATAAAGAATCTCATAAAAAGTTTC 2158604 31 93.5 44 .........G............T........ AGAAAATGACATTGTTGGTTATAACACTTCTTATTTAAAGTTTC 2158529 31 100.0 45 ............................... AATCTAAAAAGTATGATCTACAGGATAGAATTCTATGGGAGTTTT 2158453 31 100.0 48 ............................... TGGTTAATATTTATTTTTATTTTATATATTGAAAGGTAGGTGTGTTTC 2158374 30 83.9 0 ..........T.A.....-.....C.T.... | T [2158359] ========== ====== ====== ====== =============================== ================================================ ================== 5 31 95.5 46 CGTCTCCTTACGGAGTATCATTCATTCTTAT # Left flank : GAAACTTCATCTTTTGGTCTAGACCAATTTTCAGTTGAAAAGGCATAGACAGTTAAATATTTTACACCTATTTCTGTAAAATACTCCAAGGCTCTTCTTAACGATTTTGCACCTTCCATATGTCCAAAACTTCTAGCTAAACCTCTTTTCTTTGCCCATCTTCCATTACCATCCATTATTATGGCAATATGTTGGGGTATATTCTTTTCCATTTTATCACCTCATTAACTATAACATTTTAACATATAAAATAAAATTTTGTTAACTAAATTTATTTTTATTTAAAAAATAATAAAGAGAATCTTTTTAAGATTTTTATTCTCAAAAAAATTCTCTTATCCATAAAATTCAAAAGGCTTAGGAAAATTATTCTCATCTTTAAATGTTAAAACATTTTTACTTTTAACTTTCATTTCAATCACCTCATTAACTACTATAGTTTAACATATAAATCAATTTTTTTATAGAAGTTTAGATTTCTTTAATTATGGTAACAATAC # Right flank : ACTATATTCAAAAAAGAATTGTATCATAATAAATTTTTAGAATATTACCATCTGGTATTTTTATTTTGAGAATTTTTTGATTTATTTAAAATAAAAGTATATTTAACTCCTCATTTTTTAGATATTATTCAATTGCTATCTTTTATCTAATTTTTCAAAAAATAAAGGCTATGTAGAACAAAAAAAGAATTTTAAATTTTAAAAAAAATTCTCTTATTCATAAAAATTCAAAAGGCTCTGTAAGATTATTCTCATTCTAAAAAGTTAAAACATTTCCACTTTTAACTTCCATTTCATAACCTCATTAACTATTACAGTTTAACATATAAATCAATTTTTATAGAAGTTTAGATTACTTAATTATGGTAACAATACCGTCTCCTTACGGAGTATCATTCATTCTTATGAGGCATCAAACTTGATATACGAATATAAGTATATCATTGGATTTCCGTCTCCTTACGGAGTATCATTCATTCTTATGAAAAAGCACAAAAGGT # Questionable array : NO Score: 2.84 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGTCTCCTTACGGAGTATCATTCATTCTTAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //