Array 1 274264-273660 **** Predicted by CRISPRDetect 2.4 *** >NC_013849.1 Ferroglobus placidus DSM 10642, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================= ================== 274263 23 100.0 40 ....................... GGTATCAGGAAAACGAAGAGGGGAGACCTGATGTGCTCAT 274200 23 100.0 43 ....................... ATTATAATGGATGCATCTGTAGTTGAATGGTTCAGGTAGAACG 274134 23 100.0 40 ....................... GCGTATAATGTCGTCATAAGTTTCGTCTTTTCTTCCAATT 274071 23 100.0 41 ....................... GAGCAGGAGTTGCGAAAACTCCAGTCTGAAAGCTGGAGACA 274007 23 100.0 40 ....................... TTATACCAACACCACCTCCACCACCGAACTGAGGCATTTA 273944 23 100.0 41 ....................... CGGTATTCGTCCAGCTTCGTTTTGACTCCTTTTAATTCCTT 273880 23 100.0 45 ....................... GTAGTCACCATTATGTCCATAAATCTGCCTGTGCCTCCTATCCCG 273812 23 100.0 43 ....................... GAGGAATTAGTGCCAGCAAAACTATCAGCGGAAGCAAAAGAAT 273746 23 100.0 41 ....................... TTGAACTCCTCTGGGTTTCCCTTCTCCTCAAGAAGTTTTTG 273682 23 95.7 0 ......................A | ========== ====== ====== ====== ======================= ============================================= ================== 10 23 99.6 42 CTCGATGAAAAGAGGATTGAAAG # Left flank : TCAGTAGTTGCCGGCTTGGTCGACGTGCCAGTTATAGGAGTTCCAACGTCAATCGGCTACGGAACGAGTTTGAAGGGATTTACGGCGCTATTTTCCATGCTCTCCTCATGCTCTTCCGGCTTGGCAGTCGTGAACATCGACAACGGTTTTGGGGCTGCCGTTTTCGCGAGTTTGATAGCAAGAGTTGCCAAACGAGGAGAATCGAAATAACTTTAAAAACCGCAATTACTTATGATTATTCTCTAAAAGCACCGCTAAAATCCATCAAATGAAGACCAACAAGGGTTTTATTCTCCTTCCAAAATTTCTGGACTACTCGAACATTTCGCACCTTTAACGCTGTTAAAGGAGCTGAAAGTTTTCTACTATTTAAATTTTTCCTCGAACACGCCGGGGTTTCGTTTTTAATTATTTCGCTCGGTATATCGTGTTCGAGGAAGCGTTGCGAAGAGAAAGCGTTATATACTTCCATTCGACGTAAATTTTGTTAGAGTATAACC # Right flank : CTCATCAAAAGTTCGGTCGGTGGTGAGAAAAATAGATGGGAAACAGACTTCTAACTTCAATAAAAAAGAGCTGAAAAATGAATAAAATCAAACGAGCTGACACTTATCTCTTGGAACTAAACTTCTTCCCTTTTCCCCTCAGTGTATTTCGTGCCCGTACCTCTTTTTCAAGATCAGGGATATGGTTATCGACATGAGGGCAAGTGCAACGTAGACGATGAACCCTCTTGCATATCCAAGCTCACCGAAGGCATCGACAAAGGCACCAAGGATCGGTGGGACTACGAAGCCTCCAAAAGCTCCTAAACCACCAACCCAACCGCTTGCTCCACCAACAGCTTCTGGAACGTATTTGGCGACGAGTTTGAAAACTGCAGCGTTGGCAATTCCCATCCCCGCTCCTATGAGAATCTCTCCTATCAATGCCGGAGCGAAGCTTGTCGAAATCGTTAGAATTCCCGCACCTATCAAAACGAGAGTGTAACTCATTATCGCGGTTC # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGATGAAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 677805-676127 **** Predicted by CRISPRDetect 2.4 *** >NC_013849.1 Ferroglobus placidus DSM 10642, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================= ================== 677804 23 100.0 45 ....................... TCAGGAGTTTTCTTTTAAGTTCTCTGCTTATTTTCTCGTCCTTGA 677736 23 100.0 42 ....................... CAATTGCCACTGTTCCTGGGCTTTCAATTGATTCTGTGGTAT 677671 23 100.0 39 ....................... TGTATTCCTCTAAAGCCTCTTTGTATTCTTTGTACCACT 677609 23 100.0 44 ....................... CCGCAAATTCCGCACTTTATCGGCTGGAGCTTTTTAACTTCCGG 677542 23 100.0 41 ....................... ATCGCCTCGCCAATCCTCGCCCCATTTCGCAACTGTGTGAG 677478 23 100.0 39 ....................... ATGGAGGCTCTACAACAACAGAAGCAGACATTTACTTTG 677416 23 100.0 39 ....................... TGAGAAAACCAAGCCAGACTTCGTGGGAGCGGGCGTGAA 677354 23 100.0 40 ....................... GCTGGAACGACAACGGCTGATTACACAGTATTTGCTAATG 677291 23 100.0 40 ....................... GAGATGCTATAAAATCAATAGAGATGTTCCACCAATCCAA 677228 23 100.0 42 ....................... TGTTACAAGATTGTTTCCCTATGGGAAACCTCCCTGCTTTAG 677163 23 100.0 41 ....................... CCCCTTCTAACTCTCGTTCGTAGTTTGTAAAACCTTCTCTT 677099 23 100.0 40 ....................... CTTGTTAAATCAGATGGATCGGACATCAGAGTTTTCGACC 677036 23 100.0 40 ....................... GTTCTCTGAAAATTGTTGGAGTTAGCTTCCCATCCTCGCC 676973 23 100.0 41 ....................... CAAGATTGTTACATCTTGCTTCTCCTCTAATCCTCCAATGG 676909 23 100.0 40 ....................... GATAAGGTATCTAACATCAACCAATTTTCCTCCGACTCTG 676846 23 100.0 41 ....................... AATCACCTCGATAACAGCTCTTTCAACAACGGTGCTGGAAT 676782 23 100.0 40 ....................... ATGCAGTTCATGCAGTAATGTCCGAGCGCTTCTCCTCTGG 676719 23 100.0 39 ....................... TACTTTCCTGAAACTTCGGCGAGCTTCAGCATCTCGTTC 676657 23 100.0 40 ....................... CTAAGCCTTCTCACGCATCTACCCCCTTTTATTTAAAAAT 676594 23 100.0 44 ....................... CTCTATGATGTGCTGCAATCTCGCTTGGTGTTTGCCACCCTCCC 676527 23 100.0 39 ....................... GAGCATTCAGCGAGAGATTGACAGTTCAAGGCAAAACCG 676465 23 100.0 41 ....................... ACCAACTCCGTCGTCTTCCCAGTTCCCGCGTCCCCAATCAA 676401 23 100.0 42 ....................... ATACGTTTGGCGGAATTCTGTCTCTGATAAGTGGTTCGATGT 676336 23 100.0 39 ....................... TCCCAGCGGTAGTGAGACCACGACGGACCGCTACAATCG 676274 23 100.0 41 ....................... TCACTGCACGGCATTACCAGACTACTCAACACAAATCTCCT 676210 23 100.0 38 ....................... TATTATACCGTAGATCAGATGGGGAATTTCACGGAGCA 676149 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ============================================= ================== 27 23 100.0 41 CTCGATGAAAAGAGGATTGAAAG # Left flank : AAGAAGGTCATCTTGCTGACATCGCTCTCATCAACTACAAAGCCGTAAGCATGATTCCCCACTACTCTCCAGAAAACGCTCTCGTTTACTCAGCTTCCGGAGACGAGGTTGAGCATTTGATCGTAAACGGAACGATCGTTATGGAGGACAGAGAAGTTCTCACAGATGACGAGGAAAAGATAAAGAGAAAGGTCGAAAAAATTTCCGAAAAGTTCAGGGAAGTTGAGTAAGTATTTGTTTTTATCCGTTATTTTTTGAAATTGGATGAATTGTTGAGAAAACGTATCTAAAGCTTTTTACAAAATTTCTGGACTACTCGAACATTTCGCAACTTTAACACTGTTAAATGGGCTGAAAGCTTTCTACTATTTAAATTTTTCCTCGAACACGCCGGGGTTTCGTTTTTAAGTGTTTCGCTCGGTATATCGTGTTCGAGAAAGCGTTGCGAAGAGAAAGCGTTATATACTTCCATTCGACGTAAATTTTGTTAGAGTATAACC # Right flank : AATTCATTCTTCAGTGCTGCAACCCGACAAAAAGGGAGATTAGATTAGCACACATGTAAAAATTATTTAAAAACCTCCAAAGCTACTTTAAGATCCTCCTTTCCGTAGATTACGAGAGTGACTTCCTCGACGCTCTTTGCTTCTTTTGAGAAATCTCTCACCGCATCGAGAAACGTTTTCACAACTTCCTTAAGCGGACATCCGTAAATTCCGGCGCTAACAGCTGGAAAAGCGATGCTTTTAAGCTTCATCTCCTCGGCTTTTTCGAGGGGCGCTTTAAAAGCTTTATAGAGCTTTTCCTTTAAATTTTCGTTCCACTCTCCTTTACATATCGGACCGACGGTGTGGATAACATACTTTATCCCCCTCTCCTCAAGCCTCATAGCCGGAGTTACGACGACCTCCCCGTGCTCGATATGGTCTCTCCCTATCTGCTCCCTCATCGCCTCCTTGCTTATTCTCGTGTATTCAGATGCGTCTCCGGCACATGCCTTGGCTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGATGAAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 825425-824286 **** Predicted by CRISPRDetect 2.4 *** >NC_013849.1 Ferroglobus placidus DSM 10642, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================== ================== 825424 24 100.0 43 ........................ TTATGAGGGCTGCAAGAAATGCCCTCAGGGAAGATAGAGATAA 825357 24 100.0 42 ........................ TTTTTCCTTTTCAATTCCTTAATTCGTTCTGCCTTCTTTCTG 825291 24 100.0 40 ........................ TTCAAAATATCTTCGTCTCCAAAACTCTTCTCAATTCTTC 825227 24 100.0 42 ........................ TGTACTTGGTTGAAACACTTTCGAGAAAGTCGTAGCAGAAAA 825161 24 100.0 40 ........................ ATGGCTCTCTCGATGGCGTCTCTGATGACTCGTGGTTCCA 825097 24 100.0 43 ........................ GCTTCATTCTGTCTCTGCTTAGGGGTAAGTAATATATGTGTTG 825030 24 100.0 41 ........................ TCTTGTCTTCCGCCGGAATGTCAACTCCACCTCTGGCTCCG 824965 24 100.0 40 ........................ TGATTGTTGCAGTCTCCTCGGTGTAGGTGACTCCTTCCAG 824901 24 100.0 39 ........................ CTTATCCATACCTCAACTCCACCAATTCTTACAACCTCG 824838 24 100.0 41 ........................ TTCAACCACTACTCTGACCTTCTTTTCATACTTGCTCATAT 824773 24 100.0 41 ........................ GTTCGTTACGCCGAGCATAATACAGCAGTTTTTTCCTTTCA 824708 24 100.0 42 ........................ GTAGAATATTAACGATGACCGGTATTCCCGCAGCTATCACAC 824642 24 100.0 41 ........................ CTAAATATCCACTCCCAGCCCTCGTCCACTATAGCCTTCAA 824577 24 100.0 41 ........................ TTTCGCTAAGCTCATGCCTGCTAATCCAAACCACGCCCACT 824512 24 100.0 40 ........................ CTGCCAAACACAGCATAGCCGTTCTGCCTTAAATAGTCAG 824448 24 100.0 41 ........................ ATAAGCTGTATGTCCTCTATGACCGTAACCTCCCTCTGCGT 824383 24 100.0 50 ........................ TATAAGCTCGAAGAACTCGAAAAATTCGGGTTCAAGGTAAGGGAAACTGT 824309 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ================================================== ================== 18 24 100.0 42 GAATCTCAAATAGAGGACTGAAAC # Left flank : GATCGAGACTCTGGTGAAAATCGCTTCGAGACATTCCATGTGCCTAATAAATGCAACAATGGTATAAGTTTTTTCTGACATATGCGGACTGATAAGCATACACCTCACACTATTCTTTCTTAACGACTACGCCGGCATAAACGCTTGAATCAGTGCCTATCTATCTTCTTCAGTATTTTCTCATTTTTCAGTCCTTTAATTTCCTGTTAAATAATTGAAAAGGCTGATGATCAACTGAATTTCAAATTAGAATCTTTTTGAAGGTTTATTTCGCTTTAAATTTATTTTCTCTGTAGTTCCAAAATTTCTGGACTACTCGAACATTTCGCACCTTTAACGCTGTTAAAGCTGCGGAAAGCTTTCTACTATTTAAATTTTTCCTCGAACACGCCAGGGTTTCGTTTTTAATTGTTTCGCTCGGTATATCGTGTTCGAGAAGGCGTTGCGAAGAGAAAGCGTTATATACTTCCATTCGACGTAAATTTTGTTAGAGTACAACC # Right flank : GGTACATTCTCTCTAGCCAGCGAGTATGACAACGAGTCGAACGGCACGGCTTCTCGATGAAAAGAGGATTGAAACGACATGTTGACGTCAACCATGGCGGTGGTAAAATTTTATAAAACTACGATTCAAATAGTTGTAGCCGATGATGAACTAATCCGCCTCTGAATAGTGATGAAAAACGGATCTCTGAGGGTTTAGGATGTTTACGGTAAAGATAGAGGAAGTGATAGAACACAACGAAAGGTACTCCACTATCATCTTCGACAGGAGCTTTAGAGCTTATCCCGGGCAGTTCATTATGCTTCACGTTTTTGGCTTGGAAGAGATTCCCTTAAGCTTATCCTCTGAAAATTCCGTTACCGTCAAAGCTGTTGGTGAGACAACGAGATACCTCGTAAAAATTAAGCCCGGAACGAGGGTTGGTGTAAAAGGGCCTCTCGGAAATCCATTCTCTCCCACGAGCGGAAAAGCTTTGATAATTGCTGCGGGAATTGGAGCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCTCAAATAGAGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: R [matched GAATCTCAAAAAGAGGATTGAAAG with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : I-A [Matched known repeat from this family], // Array 4 1318858-1320220 **** Predicted by CRISPRDetect 2.4 *** >NC_013849.1 Ferroglobus placidus DSM 10642, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =========================================== ================== 1318858 23 100.0 43 ....................... TCGTGAAGTATCCCGCCTTCTTCTTGGGAGGTGATTTAACGAG 1318924 23 100.0 41 ....................... ACATACTCACCACCTCTCACATTCGTGGAGACAATAACCCA 1318988 23 100.0 39 ....................... CCAATTGGAAATTTCGTTGAAAGTTCGAAAAAGTTTTTA 1319050 23 100.0 40 ....................... TCGCAACCTTGTTCGGTCTGTATCTAATCACCCTACCAAT 1319113 23 100.0 40 ....................... GATTATGGCTTCAGATGGGTTTGGAACTACTTTAAGAGTG 1319176 23 100.0 38 ....................... AAGCCATAGTATTCAAGCAGGTAACCATGCCTTCCTAC 1319237 23 100.0 40 ....................... TCTTATTTCCCTCCTGTAAACCTCTTCAAAACCTCGTCTG 1319300 23 100.0 39 ....................... GCGATTTGGCTACTTTCTTGTAGCCTATCAGCTCGTGAG 1319362 23 100.0 42 ....................... ACCTGATCGTCCGTACCATCACAAACGTAATCTCCTGACTTA 1319427 23 100.0 41 ....................... TAGAGATACACTGTTCTCCTTCTTACCCTCTTAACCTTAGG 1319491 23 100.0 42 ....................... GTCTATTGTGTCTTTGTTGGTTATCTTCTTGAAGTCTTCCAA 1319556 23 100.0 43 ....................... ATATTATCCCTCCAGTGCAGCTTTTCTTTTTAGATAGTAGGGA 1319622 23 100.0 40 ....................... TTGTCTGTTCCAAATGGAACTTCCAGATCGTCGGCAAAAT 1319685 23 100.0 40 ....................... AAGAGAGAGTCTAATCTATGCAGTTATTGTGAATTTATAC 1319748 23 100.0 42 ....................... ATCGTAGGGACAGAACCGGGTAGCTTTCGAAATACTTGGTTG 1319813 23 100.0 42 ....................... AGAACAGTTGCTGCTGCCGGCTTCTTTTGAGGTAAGAATGGG 1319878 23 100.0 42 ....................... TTGGAGGCTTACCGATGCTGTTGGAGCTTTACATAACAGTGT 1319943 23 100.0 40 ....................... ACCTTTTTAAATTCTCTATCCACGTTTGTACTGTAGGAAA 1320006 23 100.0 40 ....................... TGTTGTAGGCTTCGTTAGGCGTTCTTGCCCTAATTTTGGC 1320069 23 100.0 41 ....................... CTCATCGCCCATCCACCTCCTCATAACCAACTCCGCAATTC 1320133 23 100.0 42 ....................... CTTCGTGTCCAAGTTGTAGAGCCACAACGCTATCCTGTACCT 1320198 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =========================================== ================== 22 23 100.0 41 CTCGATGAAAAGAGGATTGAAAG # Left flank : GACGAAGAAAGATAACGTGAGCCCTTACTTTCTTGAGTTTTATCGTATTTTTACCAAATTTCTCAAGCCTTTTTCTTACTTCCTCATCGCTTAGACCGGTTTTTGAAGTTTTCAACAACTTTAAAACTTCTTCTGGAGATAGCGACCAGTAACTTTGTGTTTTCATTTAAAATATCCATGTTTCGAACGCTCTTTTAATGTTTTTTGGTAAAGTAGTAAAAGTGCAACCTATACTTCTATTTTCTTGTACGCTTTTATGGTTGCCTCGAAAGTTACAAAAAGAGTCAGTTTAAGCTTTCCAAAATTTCTGGACTACTCGAACATTCCGCAACTTTAACGCTGTTAAATGGGCTGAAAGCTTTCAAATATTTAAAATTTTCCTCGAACACGCCGGGGTTTCATTTTTAACTGTTTCGCTCGGTATGTCGTGTTCGAGAGATGTTTGTGAGAGAAAGTATTATATACTTCCATTCGACGTAAAATTTTGTTAGAGTATATCC # Right flank : GTCAAATTCGCTCGAGCAAGTCTCCTATGACAACTCCGATGAGGAAAATAACTGCAAAGTACAGTATCACAAAAAGAATCGCAAAAAAGCCGACTCCAGCCAGAAATAGGACTGCCGGGTGAGGGAAGATTAGAAAAGATGCTATCGCCAAAATTATTCCGAGTATTATCGAAAATTTTAACGCCGCTTTCAAAATACCGAGCAGATCCTCTTTCCCTTTTCTCGAATAACCGTAAATTACGCCGAGGAGGAAGGTTAAAAGTTCCAGAATCATTTTAGAATCCCGCGTAAACTTCTTCCCTCGAATGAACGACTATTCCTTCGTCGGTTATGTCGTAGGGGTGAATCTTCTTGCTGTGGTTCGTTCCTCTTAACTTGTAGATTTCCAAGCTCCTGATTCTAACGTTCTCGCTTCTCGTGTAGTAGAGAACTATCGTTCCCTCCGTAACGAAGTTCTCAACGCCGAATCTACTTATAGCTCCTGATTCGATCACTTCAGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGATGAAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 5 1578932-1578276 **** Predicted by CRISPRDetect 2.4 *** >NC_013849.1 Ferroglobus placidus DSM 10642, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ========================================== ================== 1578931 23 100.0 42 ....................... GGTCAATCGTCGGACTGATCGTGTACGGGATCTGTGTGATTG 1578866 23 100.0 42 ....................... ATGGTTTTATGGACTCGGTGAGCGTTCGATAATCATAAGTGG 1578801 23 100.0 40 ....................... TAAAAATCAACCTCAAACGGCGGCAAAAATCTGCCAGAAT 1578738 23 100.0 40 ....................... TCGACAACAGATCGGCTTTTGGCATCAGGATGAACTTTCT 1578675 23 100.0 40 ....................... TGTATGCTTCCAGAGGAATGCCAAATCTCATTTTATTATT 1578612 23 100.0 40 ....................... CTGTAAACCATTCCGTACTCTTTATCGACATAAGGACTCG 1578549 23 100.0 39 ....................... CTGGATCCAAGTGGCTCGACATCTTCGTCAGACCTAAAA 1578487 23 100.0 40 ....................... GTGGTGAACGTAGAATATGGTGGAACATATTCTGGTGGAA 1578424 23 95.7 41 ..T.................... GGAATTAGAAAGCTCAAACAGATGGGTAGAAGGAGGCGAAG 1578360 23 100.0 39 ....................... CTGGATGTTATCGATGCTCCAATCTGCTGCTATGACGAA 1578298 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ========================================== ================== 11 23 99.6 40 CTCGATGAAAAGAGGATTGAAAG # Left flank : TCGCCGAAGCTATTGAAGCCGGGATTAAAGTTTACGAGGAGTCGAAAAAAATAGCGTATCCCGGAATGGTAGGTCCTTTCTGCTTGGAGAGCGTCATAGACGAAGAAGGAAGGATGTACTTCTTCGAGATTTCGGCAAGGATAGTTGCTGGAACTAACGTCGGAATTCCGTCTTCACCCTACAGCTACATCCTTTTCGGAGAAAACATGTATATGGGTAAAAGAATCGCCAGAGAGATCAAGCTTGGAATTGAGAAAGAAATGCTGGACGAAATGATCTACTGAATCTCTTGACTCTTTCAAAATTTCTGGACTACTCGAACATTTTGCAACTTTAACAGCGTTAAATGGGCTGAAAGCTTTCTACTATTTAAATTTTTCCTCGAACACGCCGGGGTTTCGTTTTTAATTGTTTCGCTTAGAGTAGCGTGTTCGAGAGAGGATTTGTGAGAGAAAGCGTTATATACTTCCATTCGACGTAAATTTTGTTAGAGTATAACC # Right flank : ATAGAAATTACGCCCTTTTCAACTTCGGCTCTTTTTCGGAGAAGTCCACGTAAAACCCTATGCTCTCTAAATATTCGTAGCTTCTTTTTCCTTTTCCGTGGAGCATCAGCTCGAGTAAATCCGATTCGTCGTCGATGTCAATGCTTGCGTAGAACGAGTCAAAAATACTTAAATTCAACCCGAGCTTTTCAGCTATTCTTACGTGTTTCAAAAAGCTTCCGTAGTGATAGGACGTGTAAAATTCTCTGCTCCTTGACAAAAGCATGTTCGTCCCTCCTTTTCTTCCCGGAGCGATCACAACGTCGCCATCAGTATCTAAGAATTTTTTAACGATTTTTTTGCTTATCAGAGCGAGATCCGACATAACGAAAGCCGAATCCTCCTTTTTTATCCTCGAAGTTACTGCAGTGTCGAGATCTCTCTCGTCAACTTCGTGCTTCAAGTCTCGAAGCCTTTCGTCTCTCGATGCAGATAAAACTACGGCTTCTTCGCAACAGTCT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGATGAAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 6 1598458-1597286 **** Predicted by CRISPRDetect 2.4 *** >NC_013849.1 Ferroglobus placidus DSM 10642, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================ ================== 1598457 23 100.0 41 ....................... TTTTCAGCATAGCTAAATGGATAAGGGGATGAGTATGGCAG 1598393 23 100.0 39 ....................... GGCAAACAAACGCAGCGGGAGAGGGAGTCCTAAAGTATT 1598331 23 100.0 40 ....................... TCTCGTTGTAGTCTTCAGCGTGGCGGAAAACAGCGTGAAT 1598268 23 100.0 40 ....................... TAGAACGCCTTTATTATCACGAGGTCTACGTCTGGTGCTA 1598205 23 100.0 40 ....................... TGTTATGTATACCCATTCGGTTATAATTATTTTGTCTGAC 1598142 23 100.0 44 ....................... CTGTAGCTGATCCTTGTTCTCTTTACAGAACTCTTCCATCCTGC 1598075 23 100.0 39 ....................... ACCACCTCAATACTTACTGCAACCCTGAACTATTTAAGT 1598013 23 100.0 39 ....................... TCTTGAGCATCTCGTATTTCCAGTGCTGCAACGTCCCAG 1597951 23 100.0 41 ....................... TTGAGAGTGCTTTGTTTGTCTGGTGGGGGGATACACCAATA 1597887 23 100.0 41 ....................... TCTACCCCTAATAGACAAATGTCCGTCACCAATAATATACC 1597823 23 100.0 42 ....................... TCAGAAGAAAGATTGTGTAAGTTCTTCAAAAGAATCTCTTTG 1597758 23 100.0 43 ....................... ATCGTTAAGTCTTCAAGCGTCCTTTTGTCGATGATTTTAACGA 1597692 23 100.0 41 ....................... TAGAGCTTTTTGAAAGCATCGGGCTCTTTAGCGATCAGAAT 1597628 23 100.0 41 ....................... CTAGTCTCCTATAATCTCTCAGTATCTCCCTCTTAATCCCT 1597564 23 100.0 41 ....................... CTAGGGAAGGGAGACGTCCCCCTTGTGACCACAGCTCGAGA 1597500 23 100.0 41 ....................... AGAAGCACGACCTGATGTGAGGTGTTGAACGTGAAGATCAA 1597436 23 100.0 43 ....................... AACAGTCACCTGCACCATCACAATCACCTCGCAAAAAATTAGA 1597370 23 100.0 39 ....................... GCTGATGAAGAGGAGGATGAAGAATGAACGAGCTGATCG 1597308 23 95.7 0 ......................T | ========== ====== ====== ====== ======================= ============================================ ================== 19 23 99.8 41 CTCGATGAAAAGAGGATTGAAAG # Left flank : GGACTTTATGGGGATTTCCTCTTTCTTATCATTTGTAACTATCAAAATTCTCTTTTTCTTTTTCCTTAGAGTTGCTCCAAAATCGTCTATTAGCAAGTGTCCATATTCGGTTAACTTCATCAAATTATTTTTGATACAGAAAATTAAAAGCGTTTCTCCACAACAAATCATTTACATTAGAAAATCTGGACGAGCTGCTGAGCACTTAAAACCTCAATTCAGAAGCTGAAGAGACCGAACGTTAGGTAAAAAGCCTTTCAAAGTTGTATTTTTGCTTCGAATCGATTCTTTTACTCTTCCAAAATTTATGGACTACTCGAACATTTCGCACCTTTAACAGCGTTAAATGGGCGGAGAGCTTTCTACTATTTAAATTTTTCCTCGAACACGCTGGGGTTTCGTTTTTAATTTTTTCGCTCGGTATATCGTGTTCGAGAGAGGATTTGTTAGAGAAAGCGTTATATACTTCCATTCGACGTAAATTTTGTTAGAGTATAACC # Right flank : CTAACACCTAAAACAAAACTCCCCCTTCACCGGATAGTCTCTGGTTAAGCACGCCAAACAAAGCCTGTCTTTTCTCATTCCGATAGCTTTTATTAATCCTTCTAAAGAGAGATAAGCCAAAGAGTCAGCCCCAATTTCTCTTCTTATCTCCTCGATTGTTTTTTTGCTCGCAATTAACTCTTCCGTAGTCTGCATGTCTATGCCGTAGTGGCAGGGTGAAATTATCGGGGGGCTGCCGACTCTGAAGTGAACTTCCTTCGCTCCGGCTTTTCTTATCATATCCACTATTTTCCTGCTCGTAGTCCCCCTTACTATGCTGTCGTCCACGAGCACGACTCTCTTTCCTTTGACGTTTTCCTTCAAAACGTTCATTTTCAACCTTACCGAAATCTCTCTAAGCTTCTGCTCCGGCATTATGAAAGTTCTGCCGACGTACCTGTTCTTTATCAGCGCTTCTATGTATTTTATCCCGCTTCTTTCAGCGAAGCCTATAGCTGAGG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGATGAAAAGAGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.87%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.18 Confidence: HIGH] # Array family : NA //