Array 1 1950948-1948724 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI535358.1 Klebsiella pneumoniae BIDMC 40 addTG-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1950947 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 1950886 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 1950825 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 1950764 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 1950703 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 1950642 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 1950581 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 1950520 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 1950459 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 1950398 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 1950337 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 1950276 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 1950215 29 100.0 32 ............................. TTGTCCACTTCACGCCAGTAGTCTTTAGAGAT 1950154 29 100.0 32 ............................. AATGGAGGTCCGGTTACTGCTGGAAATGTTTA 1950093 29 100.0 33 ............................. ATCCCCACCACCGGCGCTGGCGAGTAGTACCGC 1950031 29 100.0 32 ............................. ATGTGAATTTCCTGGCCGGTTGGTAGTTTGAA 1949970 29 100.0 32 ............................. TACTGAAACGGGTAATCAGCACAAATACCAAA 1949909 29 100.0 32 ............................. CATCGCTTTATGCCGAAATGAGGATGATAGTG 1949848 29 100.0 33 ............................. GAGCTTTCCTCCTCGTATCACTACCGCGCAGAC 1949786 29 100.0 32 ............................. ATCAATTCCCTCATTTTTTTTCCTTTAGCTCG 1949725 29 100.0 32 ............................. TTCATCTGGTAGCAAACCGCCATCGGGAAGAA 1949664 29 100.0 32 ............................. ATTTTTTGGGGCACAATTTGGGGCATTTTTTT 1949603 29 96.6 32 A............................ AGGGTTTCGATTTTATCGGGATAGAAATGAAT 1949542 29 100.0 32 ............................. TGGCGGACGTTGTACCTGTGAGTTAATTCTTC 1949481 29 100.0 32 ............................. ACCGCTCCTCTGACGCCAGGAGGGTGTAGGAG 1949420 29 100.0 32 ............................. TCCAGGGGCAAAGAATTGCCCATTATCGTACA 1949359 29 100.0 32 ............................. TTTGCAATATCTGCCTGCGCCGCCGCCAACGT 1949298 29 100.0 32 ............................. CTCGGATAAAATGCCTTGCATGAGGCGAACGA 1949237 29 100.0 32 ............................. GCGTCCAGTTGAACCCGGCACATTCCCGCTGG 1949176 29 100.0 32 ............................. TACGCAGCCGGATCCAGGAGCGCATGGACGCT 1949115 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 1949054 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 1948993 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 1948932 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 1948871 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 1948810 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 1948752 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 37 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //