Array 1 4294052-4291402 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024429.1 Klebsiella pneumoniae strain DA48896 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4294051 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 4293990 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 4293929 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 4293868 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 4293806 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 4293745 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 4293684 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 4293623 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 4293562 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 4293501 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 4293440 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 4293379 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 4293318 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 4293257 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 4293196 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 4293135 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 4293074 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 4293013 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 4292952 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 4292891 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 4292830 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 4292769 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 4292708 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 4292647 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 4292586 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 4292525 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 4292464 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 4292403 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 4292342 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 4292281 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4292220 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 4292159 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4292098 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4292037 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4291976 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4291915 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4291854 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4291793 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 4291732 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4291671 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4291610 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4291549 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4291488 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 4291430 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //