Array 1 2-360 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNHD01000032.1 Finegoldia magna strain UMB0115 ERR1203622.17957_1_34.32, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2 30 100.0 35 .............................. GTGCCAAACGTCGTCCAATTCCAAGTGCCGTCCGA 67 30 100.0 35 .............................. GCCATAATTGCCATTGCTCCAGTTACCGTTCCGAT 132 30 100.0 37 .............................. TCTCTTGATGGTCTATAAACTGTAATTCTTTTACCAA 199 30 100.0 36 .............................. ATCGGAGCATACTTGACTGTGGATACAGCGAAAGCA 265 30 100.0 36 .............................. ACATTTACAAGGACCTCTTCCTTTTCTTCGCCTCTC 331 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 100.0 36 ATTAAAATCTAACCATATTGGAATGTAAAT # Left flank : AA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATCTAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 73840-76036 **** Predicted by CRISPRDetect 2.4 *** >NZ_PNHD01000005.1 Finegoldia magna strain UMB0115 ERR1203622.17957_1_34.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 73840 30 100.0 36 .............................. GATTTCATCAAATCCTTAACGGATTTTGCGTGATCT 73906 30 100.0 35 .............................. TAAGACTTCGAATAATGAGTCGTGACACAAGAGAG 73971 30 100.0 37 .............................. TAATCTACCGCTTGTATTTTTCTGTAACCTGAACTAT 74038 30 100.0 36 .............................. GTCTTCTAAAAGTTTGTTCAATACAAGTACATCACA 74104 30 100.0 35 .............................. ATATCAAGGTAGAGACTTCACCCTTGATGAAGCAA 74169 30 100.0 34 .............................. TGCATTTTGTATATCATTTCTACACTTCGGTGCA 74233 30 100.0 37 .............................. ACTGGTTTTTGAGTAGGATGTATCTTCGGATAAATAT 74300 30 100.0 35 .............................. AGTATCAAGCAAAATTGCTGAGGTTTGGGGACCAC 74365 30 100.0 37 .............................. GCAGAAGACGTAAGTTGGTCTTTTATTGCAGCAGGAC 74432 30 100.0 35 .............................. GTTGCTACTCCTCCAACTTGACTCATTTTCCCGAA 74497 30 100.0 35 .............................. ATATATCCCATGACTTAATATTGTCTATTCTCGGC 74562 30 100.0 35 .............................. ATGAATAAATCCACCGCAGATATGGTTCCTGCTAC 74627 30 100.0 34 .............................. GTATAAATCAACTTAGTGTTTGAGCCTTTATGAA 74691 30 100.0 34 .............................. CTCGAACAGCTCCCAGAAATACTTGAAGAATTAG 74755 30 100.0 37 .............................. ATTGGAGCATACTTGACTGTGGATACTGCGAAAGCGA 74822 30 100.0 35 .............................. AACCTTGATAATTATGTTAGTGATTCAACTAATAA 74887 30 100.0 35 .............................. GTGCCAAACGTCGTCCAATTCCAAGTGCCGTCCGA 74952 30 100.0 35 .............................. GTGCCAAACGTCGTCCAATTCCAAGTGCCGTCCGA 75017 30 100.0 35 .............................. GCCATAATTGCCATTGCTCCAGTTACCGTTCCGAT 75082 30 100.0 37 .............................. TCTCTTGATGGTCTATAAACTGTAATTCTTTTACCAA 75149 30 100.0 36 .............................. ATCGGAGCATACTTGACTGTGGATACAGCGAAAGCA 75215 30 100.0 36 .............................. ACATTTACAAGGACCTCTTCCTTTTCTTCGCCTCTC 75281 30 100.0 35 .............................. GTGCCAAACGTCGTCCAATTCCAAGTGCCGTCCGA 75346 30 100.0 35 .............................. GCCATAATTGCCATTGCTCCAGTTACCGTTCCGAT 75411 30 100.0 37 .............................. TCTCTTGATGGTCTATAAACTGTAATTCTTTTACCAA 75478 30 100.0 36 .............................. ATCGGAGCATACTTGACTGTGGATACAGCGAAAGCA 75544 30 100.0 36 .............................. ACATTTACAAGGACCTCTTCCTTTTCTTCGCCTCTC 75610 30 100.0 37 .............................. AACTCAAACTTGTCATCTTTGTACACCGCATATCATT 75677 30 100.0 35 .............................. ACAAAAGAGGTAAACAAAGGACTTGAATTAATCGG 75742 30 86.7 38 ........T......G.G...........G TCATATAGGAGGGAAGATAGAGCTGGATTTATTATAAC 75810 30 90.0 36 ........T......G.G............ ACTATAGACCTGATAATCAAGCAGCAGCAGGAAATG 75876 30 90.0 35 ........T......G.A............ GATCTTGACAATTATGTTACAGATAGTTCTAGTAA 75941 30 90.0 36 ...........C...G.G............ AGTATTAGTAATGTTGAGTATGTTGGCGCAACTATT 76007 30 90.0 0 ...........C...G.G............ | ========== ====== ====== ====== ============================== ====================================== ================== 34 30 98.4 36 ATTAAAATCTAACCATATTGGAATGTAAAT # Left flank : TGGTGAAAAAGAATATGAACCGTTTATAATTTGGTGGTAAAAATGTATATAATTTTGGTGTATGACATCTCGAATGAAAATAATGGACAACGAAGGTGGAACAGAGTATTCAAGATATGCAAACAATACTTAAACCATATTCAAAACTCCGTATTTGAAGGTGAAATTTTAGAATCAGATTTGTTTAAGTTGAAGAAGAAAATCAAAAAGGAAATCGATGAGAAGATAGATTCAGTAATAATATTCAAAAGTCGAAACGAAAGATGGCTTGAAAAAGATATATTGGGAACAGAAATTGACGATCCACAATTTATCTAAATATAATTTGTCAATCACCTGTATAGACAAAATACACGTAGATCGACAACGCCTAAAATCACACATTATTTTGTGTTACATTGAATTATTTTCAAAAAAATCGTAAATTTGATATACTTAAAAAAGACATAGACAGAAATACCGTCTATAAGCATTGGAAATACTGTCATAGACAGTCTCCT # Right flank : TCGTGCTGAGAGTGATGGATTATCAATTATACTATTATTAAAATCAATCATAGTGAATGCATTTAACCTCAATATACAATAAAAAAGGTTTGGATATAGAATTATTGGAGTACAATACGATTTATTGAACACAATAGATGTAAATAGAAATAGATATGATGAATATATACCTACTATTGCGCAAAAGATAGTTATGAAGTTTACGAAGATGGATTGAAAATGAGAGTAGGACATGATATTTTTGTTTTTATATGTCAGAATTAAATCAGTTGAAACTTTAGATTATATATACCTGTTAACCATGAATTAAAACTCAGTACGTTTCTGGATATCGTCATCTTCTATTATTTCAAAATCATCTGGATCGTATAAATAATCTTCATCAGTATCATCAATAATTCTTATAAATTCACCTTCATATCCGAATGCTTCGTAAATTTTGTTTTTAGTTAGAGATATACCCCAATTTTCTCTTATATATTTAGCCTTCATCATTGTCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAAAATCTAACCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //