Array 1 67588-71243 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKJD01000002.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 67588 36 100.0 30 .................................... ATTTTATCTTCTAGTTCAGCAACTGATGTG 67654 36 100.0 30 .................................... CTGATGCCACCGACGAGGAAATAACCACTA 67720 36 100.0 30 .................................... CAAAGTAGGAGAAGCTATCTCAGGTACTTG 67786 36 100.0 29 .................................... TTAATAGGTTGTTTAGCCTTGCATTGTTG 67851 36 100.0 29 .................................... TAGACGCGTATATTCGCGCTGACTCCGCA 67916 36 100.0 29 .................................... TTCACAGCAAATGATATGCCTACCTTCCG 67981 36 100.0 30 .................................... GAAAATGATTGTTTCTTTTGATACATAGTT 68047 36 100.0 30 .................................... AAGTGATATGTTGCCGCATGGCCGAATGTA 68113 36 100.0 30 .................................... AGTCAGAAGTGATGATATAGTTAAGATAGG 68179 36 100.0 29 .................................... TGATAAATATATCGTCATAAGTTCCTTTA 68244 36 100.0 29 .................................... CGTAATATAGGAGGTGTTAACAATGGATT 68309 36 100.0 30 .................................... CTTAGACCAAAACAAAATGAACTTCTCACT 68375 36 100.0 30 .................................... CATTGAATTAAGCAAGATGGAACCAACTGA 68441 36 100.0 30 .................................... GGTTTGCGATGAACGCATTTGGCTAGAGTG 68507 36 100.0 30 .................................... TTAAAGAAGTCGTCTGTATTAGCGAAGTGC 68573 36 100.0 30 .................................... ACCAACTTACCTTTACGGTCCTTAATCTCG 68639 36 100.0 30 .................................... CTAATTTGTACCTTGTTAATACCTTAAGCG 68705 36 100.0 30 .................................... ATAAAGTGTTGACAGTATGTAACTTAAGTG 68771 36 100.0 30 .................................... TGTTATCATCAACATTTGCACCCAAAGGCT 68837 36 100.0 30 .................................... AGGTGACGTGCTTTGGCGAATAGCCAATAT 68903 36 100.0 29 .................................... TAAATTATGACCGTATGCACCGATGCCTA 68968 36 100.0 30 .................................... TTATGGTGGAGGGCAAAAACAGATAAGAAA 69034 36 100.0 30 .................................... TGATTTTTCATCAAGAAATGGCGAACGAAT 69100 36 100.0 30 .................................... TTCAACACAGCACAAGGCTATCATTGATGC 69166 36 100.0 30 .................................... TAATAATCTGTTAAGTCTGTGTAATGCGTG 69232 36 100.0 30 .................................... TGTTCTCATTGTTATATCTCCTTATCTTTG 69298 36 100.0 30 .................................... TGGTTGGGCGGCAGACTATGCGAAGAGCTT 69364 36 100.0 30 .................................... AGTTGATGTGAATACTCGTGGTTACGAAGG 69430 36 100.0 30 .................................... TGATGCGATTGAATTAGCAAATATCACACT 69496 36 100.0 29 .................................... ACACTCGCTCGTCCGATTTGGTGACCCAC 69561 36 100.0 30 .................................... TTCCTTAGCGTACGATTGTGTGTAGCCACC 69627 36 100.0 30 .................................... GCCACAGCTTTATACCACCTTTCAATTATG 69693 36 100.0 30 .................................... TATTATCTCGAGGTAAATCGCTATGAATGT 69759 36 100.0 29 .................................... CAATTAAATTATACACACAAGCATACGCA 69824 36 100.0 30 .................................... ACGATTGAACCTTCTTCAACGGTATGCACT 69890 36 100.0 30 .................................... TTTTGCTTACAACGGGATGCAAGAACACTT 69956 36 100.0 30 .................................... TAAAATACAGCTTATGATAAAAGCAAGTTA 70022 36 100.0 30 .................................... CTTTGCTCGTCTGCACTTAACGGATATTCT 70088 36 100.0 30 .................................... TAATTGTCACTTCATAGTCATCTTTTACAA 70154 36 100.0 30 .................................... CATTTACTATCAACCATAGAGCAACAACAG 70220 36 100.0 30 .................................... TAAAGGCGACGAAATTCTATCGGACGAGCC 70286 36 100.0 30 .................................... TGTCGCCGATAAACATCCCGATTAGTGACG 70352 36 97.2 30 ........C........................... GAATTAATCAAGTGGAATTATGTCATATCA 70418 36 100.0 29 .................................... TAACTACCTGAAATCAATCGACAATAAGG 70483 36 100.0 30 .................................... CGCTTGTCTGCCTTAAGTATAGTCCGTGTA 70549 36 100.0 30 .................................... CAACTGCTAATAAGTAGTTCTTTAAGTTCC 70615 36 100.0 29 .................................... ACGATCAAGTCTGATGTGGGAAACCATTA 70680 36 100.0 30 .................................... TTTTTAAATCTAATTAAAAAAACAGGAAAT 70746 36 100.0 30 .................................... TCCATGGCACTCGTTTTTGTGTTGGGTAGT 70812 36 100.0 30 .................................... TTTGAACTTTTCCTACTGGATCACCTGCAT 70878 36 100.0 30 .................................... TTACGATGTTATCCAAATTAACTTCACGCT 70944 36 100.0 30 .................................... CTCCGTCTTTAATTAGTAAATCGTTATAGC 71010 36 100.0 30 .................................... TAAAGGCGACGAAATTCTATCGGACGAGCC 71076 36 100.0 30 .................................... TGTCGCCGATAAACATCCCGATTAGTGACG 71142 36 97.2 30 ........C........................... CGTTGTTCGTGTGTGTGTGCATTAGTACAT 71208 36 97.2 0 ...........T........................ | ========== ====== ====== ====== ==================================== ============================== ================== 56 36 99.8 30 GTTTTTGCACTCTCTATAATTTCCTATCAGTAAAAC # Left flank : GAGACTTATATTGAACAAACAGGAGAACATGTCTGTATTCAAATAAAATATCCTGATGTTTTCTTAAGTGAAAAAAATATGGAATTATTTATGCGTCGATTAATTGATATTAATAAGAAATATAAAAAGATATTTCTTTTTATTTATCATTACCAAAAGTGTGTTGATTTTGGCATCGAAAACTTTACTTCAATTGCTCTATGTACAAACATTATTCAGCAATTGCCTGAATTTGAGTTTTATCGAAATTCAATAGAAAGGTATTATCCGATTGAACTTAAAATAGGAGATGGCGAATTGTATAGTCGCACCATCAATATTTTGCCGTATGCAGGTAATAAATTGGATTATAAAAACTTGATTTCATCAAGAGATATGGTATTATTAAAGTTGTTGAATCAACTGTTAGATTTAGATGTATTTGAGGAGACGTCCTTAGATGTTCTAACAAAGTATGAACAACTTTACCTTCTCTCATGATGCAAAAATTTTAATTTGAG # Right flank : CGCGTTAGACGATTAAAGGATTGATCCTTTTAGCTTTAAAACTATTATCGATTTTATTTGAATAGTTAAATATAAAATTGTAATTTTCATTGTAATAGTTTTATTATTTATCGGCCTTACTCTTACCAATATGAAAGAGAAGGCTGTTTTTGTTTGTCTATCACAACAATATTCATTGAATCGGCACCATACTCAACAGCATCTTCTGGCCTTACTTAAAGCCGATCAACTTTGTGAACTTTAGTAGTGCACGAAAACTAATTTTAATGTTTAGATACTTTTATTTTTTACGTATCTCATTAAAAAAGAAATGAACATATTTTAGTTTTACATCATTGGTAATGCCAGATAGACTTTTACTTTAAATGGTAGGGCGAATTGCTTGGAGATAAGCACTTCTTCATTGCAAACCTTCTTCCATATTGAGATAATAGAGGATAGACGAGGAGTGAGACTAATGAATTTTGATCACACAGCTTTTGCGGTTTTTAATGAACCTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGCACTCTCTATAATTTCCTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 2384-98 **** Predicted by CRISPRDetect 2.4 *** >NZ_PKJD01000042.1 Globicatella sanguinis strain UMB0514 ERR1203656.17957_1_68.42, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 2383 36 100.0 35 .................................... AAGCTTAAATATTCATTATCAGTCATTGACCTTTC 2312 36 100.0 35 .................................... TCTAAAAAATTGATAATAGTTTCATTAATATCGTA 2241 36 100.0 35 .................................... ATTTATATCTTTCATTATAGATATTGTATCATAAT 2170 36 100.0 39 .................................... TAAGTCACGGTTAGAGAGATAAATTTTCTCATTGCCTTT 2095 36 100.0 37 .................................... TTGAATGGTGTCGTACATAGTTTGAATAGCAGTTTCA 2022 36 100.0 39 .................................... CTTTCAATTTCCATAGCGATATTTTGGTTAGTTAGTTCC 1947 36 100.0 38 .................................... ATAATTTTTTAAGCCTCTTGATACAATTGCGACAAGTC 1873 36 100.0 36 .................................... AATAAATTAGGATCATTATTTTCAATATATATTTTT 1801 36 100.0 34 .................................... TTTAATATTTTTTGTGTTTCAAAAATTCTAGTTA 1731 36 100.0 29 .................................... TTGTAAACACTTATTTTAGATTATTTTGT Deletion [1667] 1666 36 100.0 37 .................................... TTAATTTTGAAACTTGAAAACTTTCTAAGGCAATCTT 1593 36 100.0 34 .................................... ATTTTTTGTGTTATTTATGATAATTGAAATGTAA 1523 36 100.0 37 .................................... TCAGTCCTTACAAGTTTAATAGCAAAGCCACCTAAAC 1450 36 100.0 39 .................................... TTATTGTTCATTCGTGCGTTTAAAATCTCGTAAATAACA 1375 36 100.0 38 .................................... TCCTTTACCACATCATCCGACACTTGCCAACTGTCTGC 1301 36 100.0 36 .................................... TTACATCTTCGCTAGGATTATTTATGTAGACTCTAT 1229 36 100.0 37 .................................... TTTAGTAAATTGTAAATATTCATTATCATTCATGAGC 1156 36 100.0 37 .................................... ATAAATCTCCTTTTTTCATTTTTTATTTTAAGATTAT 1083 36 100.0 34 .................................... TCTAGTATAGCCACGTGTTACCCTATCATTTCTC 1013 36 100.0 36 .................................... GATATTATCAATGGTCAATTAGTTCATGTTATGTTT 941 36 100.0 39 .................................... ATTTTGTGGTCAATCACAATTTGAAAAGAGTTACCACCA 866 36 100.0 37 .................................... TCAATATCTAAGAATTGTTCGCTAAATTCTTGCAATA 793 36 100.0 41 .................................... AAAATCATTGCTTTCATATAAATCAACCACCTTTCATAATT 716 36 100.0 37 .................................... CTTCAATAACTTTCTCTTTCACGTCTTCCATAGCTTC 643 36 100.0 37 .................................... TGTATTAAAATTGACTATGCGTCAATCTCTTCTTTTT 570 36 100.0 36 .................................... CTGTTAAGCCTGTGACATACAATGTAACATTATCAT 498 36 97.2 38 ...........................T........ TCCAGAAAACGTATGGGAAGAGGTTGAAAGCTATCGTA 424 36 97.2 37 ...........................T........ TATATCTTCCTTGATTATTTACGTTATAAAATATTTT 351 36 97.2 38 .......................T............ TGCATGGTTTTTTTGCTATATGCCTCGCCTATTGGCAC 277 36 100.0 37 .................................... TATTTGGAGCATTAAATAAATCATAACCTATAATCAT 204 36 100.0 35 .................................... AGGTTGTGGCTCAGGTTGTGGCTCAGGTTGTGGTT 133 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 32 36 99.7 37 ATTGAAGAACCATAGACTCCGTTAGGGGACTGAAAC # Left flank : CCATCTAATGTTTTTTGCGTATAATTGAGCACCACTTGTTGATTCGGTGGGGTGAGTTGTAAATATAAATCAACAATCTCATATTCCGATTCGAAGTAAGTCGGAGTCACCTCTAGCAATTCCGCTAATAAATCTAAGTTTTTTTGATTAGGACGCGTCTTGTCCGCTTCCCAATTGAAATATGAAGCACGACTCACACCGACTTGTTTCGCAAGTTGACTTTGTGATAAGCCAAGCTCTTCACGACGTTTTTTTAATTGTTGGCCAGAAAACATTAAAATCACTCCTTTGTGTAAGTTTGATAACTAACTATATTTTAGCACGCTTTGTAGCGGAAAGCAATCAAAAGTTAGTTTTGTAACTGACAATAAAATGAGAATTAAAATAGAGAGAAGTAAGGAAATTATAAAATTAATATGTTATAATAAGATTAAATTCTTCGCTAAGTTATTCTTAGCGCTATATATAGTATATATTTAATTCGTAATACTAAATATAGG # Right flank : CTTGCTTTATTTTCTGGCTCTTTGTCAAATGGTGTGGGTCACGGAATTTTTGGTCGTTCAACACAATTGTGTTGAAGGCCGTTTTATTCTAATTAAGC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAGAACCATAGACTCCGTTAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //