Array 1 73853-78409 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSE010000012.1 Gordonibacter massiliensis strain N22 N22_ctg12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 73853 32 100.0 35 ................................ TAATGAACCGATTGACTTACGCCGACAAAGAACTG 73920 32 100.0 33 ................................ TCGTACAGAACGTGCTTCTTTCCCACCAAGAAT 73985 32 100.0 33 ................................ AATACCCGCGAAATGGTAGAACCCCCAGCGCTT 74050 32 100.0 34 ................................ GCTTCGTCGGCTATGGCCTCCAGCGATCTGGCGA 74116 32 100.0 33 ................................ TTCTCCGCTGCCGCATTGGAATCGACGCCGAGC 74181 32 100.0 32 ................................ ATCTTACGCAATGGGGCATGATCGAGGTTGAC 74245 32 100.0 37 ................................ CTCCCGATTCAGCGATGAAGCAATATGACGGGAAGCC 74314 32 100.0 34 ................................ TGGCGGTGGTGGCGCTGATGGGTCTGTTGGTCTG 74380 32 100.0 36 ................................ ACCGCATCCTCAAGAGCCGTCACGCGCTTGTCCAGC 74448 32 100.0 36 ................................ GATGCGGACGGCAACGTGACCGACTACGGCAACGTG 74516 32 100.0 36 ................................ GATGCGGACGGCAACGTGACCGACTACGGCAACGTG 74584 32 100.0 36 ................................ TCTTCCCACAACCTACGCATGGCGGGAAAGTCTGCG 74652 32 100.0 36 ................................ ACCCTGCGCAGGGCGGCGTCGATCTGCTTGACGGCG 74720 32 100.0 37 ................................ CCGTCGAACGCCTTGATTTCATAGCGCACCGCCTGGT 74789 32 100.0 35 ................................ TCCTTTGGTCTAAACTCCGGTTACGAAATGCCCGT 74856 32 100.0 34 ................................ ACGTCGCGCCATGATCCCTTGCGGATCGCGGCGC 74922 32 100.0 35 ................................ CTCGTGATCCTCGATCTGGTCTTCCTCTTCCTCGT 74989 32 100.0 34 ................................ GACACCACCACGTTCGAAGCCACCAAGATCATCT 75055 32 100.0 34 ................................ GTGCGTTATGCGCAGGTCATGCCCGACAACGACA 75121 32 100.0 33 ................................ CATAACCTCGCGTTCGATGGGAAATTCATCGTG 75186 32 100.0 33 ................................ AAAGATATGCGTATCATTGAGAACAATCGGGTC 75251 32 100.0 35 ................................ GGTAATATAACGTTGAAGGAGGACGGCATGGAGGA 75318 32 100.0 34 ................................ ATATGAAAAGCGCCCCGTGCGGGACGCTGTTGCC 75384 32 100.0 34 ................................ TCGGTTCGCTGGCGCGTGTCGGGGTCGGTGTAGC 75450 32 100.0 34 ................................ CGCGTGCAGAACATCCAACCGGCATGGAACGAGA 75516 32 100.0 34 ................................ TTCCACGAGTTCGCCAGGAAAAACGTTTTTGGGT 75582 32 100.0 37 ................................ TGCATCCCCGGCGATCTGCATAAGTGCTTGCTTGCCC 75651 32 100.0 34 ................................ CAAGACCGCGAGTTGAAAAGCAATTGCGCCTCGT 75717 32 100.0 36 ................................ AAGAACGGGCAGTGAAGGGAAGGGCGGACGGCCGCA 75785 32 100.0 34 ................................ CTCCGACCGCAGCGTGCTAGGGCTGCTTCGTCGC 75851 32 100.0 33 ................................ CGGCGAGTACCAATCGAAATCATCATCGCGAAG 75916 32 100.0 35 ................................ AAGACCGGCTTGGTATCCAACCTGATACGATTGCC 75983 32 100.0 33 ................................ GCTTCGGCGTCGTTGCGGTCGTTCTCGCCAGCG 76048 32 100.0 38 ................................ ACCTGCTTCTTGTCGTCGGGGTCTATATCGACCGACGC 76118 32 100.0 35 ................................ TTAAGGTTGTTGAAGGCCCGCTTGATACTGCGCAC 76185 32 100.0 34 ................................ CGTGTCATCGAAAAGAACGAACGTCTTGTCCTTG 76251 32 100.0 33 ................................ TCCACCGGCGCGCATCCGCACGCCCGGCACGGC 76316 32 100.0 35 ................................ TCCAGCTTGCCGATGGGCACGAGCTCGGCGGGCTT 76383 32 100.0 37 ................................ CCGCCGAGCGCCTCGTACAGGTCGTTCGCGTTCGCGG 76452 32 100.0 34 ................................ CTGCGCGCCCTGCTCGGCGCCGACCAGCTCGCCA 76518 32 100.0 34 ................................ ACAGCGCCGACACCGCGCCTCCGCCCACCCAGCT 76584 32 100.0 35 ................................ TGGCATTTTACGTTGCGGGAAATGCGGCTACTCGA 76651 32 100.0 33 ................................ TTCGCGGCCAGATCGTATATCCCGTTGATCTTC 76716 32 100.0 36 ................................ TCGAACCTGCGAGCGACGTGGCGGACGATCGCCGAG 76784 32 100.0 36 ................................ TCGCCACTCGTGCTCGGCGCAGTTGGTCAGCCGCTC 76852 32 100.0 33 ................................ ATGAAGTTGCTGGAACCGCCGCCAAGAAGTTCA 76917 32 100.0 35 ................................ TCGTCGGTCGCGAGCATGACGGCCAAGGTGCAGGC 76984 32 100.0 33 ................................ CAGTTGATGTTGCTCATGGTCTCTCCTTCGGGT 77049 32 100.0 33 ................................ TTCTTTTGTCCCAGCCGAAAGGCCATCTGCGCA 77114 32 100.0 35 ................................ AACTGAGGGCTCACCTATGCCGCCACGCCTCCCGC 77181 32 100.0 36 ................................ ACGGCGAAGCTCTCCCCTGTGAAGCCGAACCCGAGG 77249 32 100.0 35 ................................ TCGTCAACGGACACGGTGATCCCCATGGTGGTGAC 77316 32 100.0 34 ................................ ACGGCCTTGCCGAGCACCTTGAAGGCGGGACCGG 77382 32 100.0 33 ................................ TTCGTGGACGCCACGAGGTCGCGCCCTCCCTGC 77447 32 100.0 36 ................................ ATCTCCTCGGTGGACGCCTTGGTGTTGGTCTGCACC 77515 32 100.0 35 ................................ GAGGTGCAGATGGCGAGCCCGGTGCGGATCGGCTT 77582 32 100.0 33 ................................ ATGGCGGTTTCCGTGTCGCTCTTAACGTCGAAC 77647 32 100.0 35 ................................ ATTCGATGGCGCAGCCTGATCGCCCACCAAACGGA 77714 32 100.0 33 ................................ AGAACGTCGACGTCCAGTCGTTCCTCAGCAGCT 77779 32 100.0 33 ................................ AACCCCTCCAACGACGACGCTAGCTACGAGCCG 77844 32 100.0 34 ................................ TGTGATGCCGAGGTCGGCGAGCGCGAGGTCGCCC 77910 32 100.0 36 ................................ GCTTGTCCTCCTCGATGCGCTTCTGGGTGTATGGCG 77978 32 100.0 35 ................................ TCGCGGTTCACGCGGGCCGAGATGGCCTTGTCGAA 78045 32 100.0 33 ................................ ACCTGCTGTGTGTGATATGGGTTGATGTAGTCC 78110 32 100.0 36 ................................ AGCGTCTTAAGCAAATGGTGGACCACGAACCCGACG 78178 32 100.0 35 ................................ CGTTACTAATGGGGGAGGCGTCGGCCGTGCGGTTG 78245 32 100.0 34 ................................ TGGTGCGGCACCTCGTCGAAGCTGCTGACGGACG 78311 32 93.8 33 ....................A...C....... TTGACGAAGCGGAAGTACTCGGCCTGGAAGGGC 78376 32 84.4 0 ...........T..............A.TT.T | A,C [78399,78401] ========== ====== ====== ====== ================================ ====================================== ================== 69 32 99.7 35 GTCGCGCCCCTCGTGGGCGCGTGGGTTGAAAC # Left flank : CCGAACGTGGCTTGCCATGCCGTGTGCCCGCTTCGCGATGCCCGCGGGCGCTTGCCTTCGAAAAACGTGCGACGTGCGGTCGATCTGAGGTGCAGCTAGGGGAATGACGTTAGGGACAGTATGGCCCGGCGGAGGATGGCGGCGCCATGTCCAAAAGCGCGCGGGAGGATAGTTTTGGGGGAGGGGACGGGGCTTTTTGGCTGGCGGCGTTGGTGTTGGCGGGGTGGAGGGAGCGGCGCGCTCGAATGATGAACGCTGACGCCTTAACTGCTTTATAATGGTGGTGCTGAGTGCCGATTCCAAACGTTACTTGCAGCTTCTTCTTTTGAGTGAACGCGCGAGGGGATCGGATTGCGCGAACCCCAAGCTATGACGATCCATTCAGGAGGTTCGCGCAGAATTCCGTGCCGAAAAGCACGGAATTGAGCTTCGCTAAGCGTTGCGATCTTTGAAAACCGAATATTATTGGACAGAAATGCAGTATTCTGCATAATCAGACA # Right flank : TTGGCTGGCAGTCGCAATATCCTTGAGCATGTAATTCGGGCGAAGCGGGCATTTGAGGTAAAATATTCTTGTCGCAGCTAACGTGCGCGGATTGAAATAGTGAGGAATACTTGTAGGCGAGGGAGGGGGCTGGCGCTTGAACCAGCCCCCTCGCGCAAGGGGCAACGGTTACGGCTTTTCTTACAATACTCTTCACTAAACGTCTCCTACAATATTCTCACTGAACCTGAAATGACTTGCATTTCGCAAAGTCAAATGTTACCATGACCCTCGTGATCGGAGAAAATCTCCCGAGAGGGGTGTTCCGGGTGACCGAATGCTACGCCCATACAGGTTCGGATGCCGAGGACGTTTCCACGTGGCAAACGCTTGTCGAGCATGCGAACGAGGTCGCCCGGCGCGCGGAGGAGTTCGCAGCCGTCTTCGGCATGGCTCCGTGGGGTCGGACGCTCGGCCTGTTGCACGATGCGGGCAAGGCGACCGCCGGTTTCCAAAAGCGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGTGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 86647-88142 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACMSE010000012.1 Gordonibacter massiliensis strain N22 N22_ctg12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 86647 32 100.0 36 ................................ TTCCGGCACGTTGAACCCGCTCAACTGGCCGTTGAG 86715 32 100.0 34 ................................ TGCGAGTTCCAGCCGAACCCCTGCGCGCCGGTGG 86781 32 100.0 35 ................................ CGTCTATGGTTTCCATTGCCGCATTGTAACCGGTG 86848 32 100.0 36 ................................ ATCGTCTTGAGGACGCTTGAGATGTTGCCCTGCGTG 86916 32 100.0 34 ................................ AGAACCATTGGGTTTCCACCTGAATACAGCAATA 86982 32 100.0 33 ................................ TTCGTAGACGGAATCTATCATTGCGAACTCTGC 87047 32 100.0 34 ................................ TTGATGGGGCACATCCCACCGGGTGTCACGGGCA 87113 32 100.0 36 ................................ TCGACGCCGACATGCTCACCGGCGGGCGGGGGCGCG 87181 32 100.0 34 ................................ ATTCCAACGGTTCGCATGGTTCCTCCTTACGCCT 87247 32 100.0 34 ................................ TCCGCTATCTGGCGCAGATTCTCCGTTGGATAAC 87313 32 100.0 34 ................................ ACCTGCATAGACGTGGCGGGATTCGCAAGGTTGC 87379 32 100.0 35 ................................ ACGCCGTCCGTCAAGCAGGAATCGCCGACAAGCCC 87446 32 100.0 34 ................................ ACACAACCGACAGCGGCGCTGCGCGGTGCCTTTA 87512 32 100.0 34 ................................ ATCGGAGAACGTGCCAAGGCGGTTGAGGTCAACG 87578 32 100.0 34 ................................ TGCCCGCTGACGCCGGAGTCGACCGCGAGGTCGG 87644 32 100.0 34 ................................ CTGATAATCCTGGCCGCCGCGCCGGGCTGGGCCA 87710 32 100.0 36 ................................ ACCATTCGGGGTAGGGGTCTGCCTTGGTGAGCCACG 87778 32 100.0 34 ................................ CACCCGCACTGCGATTGCCGGATCGTGTCCGGCC 87844 32 96.9 34 .............T.................. AACATGGCGTTCGGGCAAGCCGCCAACCACCTCA C [87850] 87911 32 96.9 35 ..............................G. CCCAGCTCGTCAGCAGACATGAGCGGACGCGCCAC 87978 32 96.9 35 .....T.......................... CCGAACCACCCGTTCCACGTCCGCGATGACGAGGA 88045 32 90.6 34 .........T..A........T.......... GTCAAGAACGGCACCCTCCCGCAGTCCGCGATGG 88111 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 23 32 99.2 35 GTCGAGCCCCCTGCGGGCTCGCGAATTGAAAC # Left flank : TGTACGTGCTCGTGACCTACGACGTGCAAACGGCGAGCCCCCAGGGCGCGAAGCGCCTGCGCAGGGTGGCGAAGATATGCGTGCAATACGGGCAGCGCGTGCAGAACTCGGTGTTCGAGTGCTCGCTCGATCCTGCGCAGTTCGAGAAGATGAAAAGCGAGTTGGAAAAGGTAGCCGATCTGTCGAAGGACAGCCTGCGCTACTACAATCTTGGAAAGAACTGGAAGCGCAAGGTCGAGCACGTGGGCGCGAAGGAAACGTACGACCCGGAAGGGTTTTTGTGCGTGTAGCATGGACGGTGGTGTTGTTTGCAGGCGTACCTTGACAGCCGAATAGGTAGGAGATGACCCTTGCGCGAATCCCAAGCTCTGGCACGTCATTCGGGAGGTTCGCGCAGGATATGCGGATTATTGTTGGTTGGCGTTGGTTTAAGCCCGACGGAGATTCGATCATTAATGCTACTTTTAAGCTAAAAATGCGCTATTTTGCATATTTCGACA # Right flank : CAGGGGGTTCTCTCCTTGCGCGTCGAGGATCTTCGTCGAGCTCCTTGTGGGGGCGAAGGTTGGTTACAGTGGGCTTCCAGCCGTGCCTGCTGCAGCGACAGGCACGGCCAGCATGCCAGTCTTCTACTCCTCCACCACCAGCGGTACGAACTCGAATGTCGTGCAGTCCACCAGCCCCCGGTTCGTCAACCTCAGCTCGGGCAGACAGGCCAACGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCAGGCGCCTTCCAGGGCGTGCACCTTCTCGCTCATCTCCTCGGCGGGCAGCGCGTCCATCAGGCCGGCTATTGGCAGCTCCACCAGTCCCAGCACCTTGCCGTCGGCGACAACCGCCATGCCGCCTCCGCAGGCGGCCAGCGTGTTGGCGGCCAGGGCCATGTCCTCGTCGTTCGTGCCCACCACCAGCAGGTTGTGAGCGTCGTGCGCCACGGTGGACGCCATGGCGCCGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAGCCCCCTGCGGGCTCGCGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA //