Array 1 4209353-4208957 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042911.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 4209352 29 100.0 31 ............................. TAGTCCCGGACCTGTTGCTCAGTCGCGAACC 4209292 29 100.0 33 ............................. ATCGACGGCGTGGCGGCGGTGCCCGCGATGTTC 4209230 29 100.0 32 ............................. AATACGTCGACTCTTTGTCGGAACAGCACCGC 4209169 29 100.0 34 ............................. GCCGCGAAGCTGCCGGCGGCGAAGCACGAGACGC 4209106 29 100.0 32 ............................. AGGGCGTCAGCACCAGCACCTTCCGCCTCTGG 4209045 29 96.6 32 ...........................A. GTGGTGGCGGACTGGAGCAGTACGCTGCTGGT 4208984 28 89.7 0 .......A...........T.-....... | ========== ====== ====== ====== ============================= ================================== ================== 7 29 98.0 32 GTGTTCCCCACGCTCGTGGGGGTGAACCG # Left flank : ATCCGCCTTGACCTCGTCGCAGAGCACGATGTCCGAGGCAAGGAACGCAAGCGAGTCCATGCGCTAGTACGGAATGAGTGCCGCCGAGGCGCTCGGGCCGTAGCAGGCGAGGAACAGGAAGGGGAACAGATACTTCATCATCGCCTCCGTGAGGGCCGTTAACAACTCCACAATGATGGTCCGGCCCTCACTGGTCAATGGCAACGACGGTCATTTACGCGTGGCGCCAAGGCCCACGCTCACCCCTCCAGCCCGGCCGCGCGGCGCCCGCACGCGATGCACGCAGCGGACCACGACTGCTCGGCGCGCTCGTGATTGGCCCACACCTTGACATCTCGGTCCGCGGAGCCGGTCCCGGTGTCTTCTTGGTCGGCCTCCAAGAGCGGGTAGATGTTCACGGGGCAGCCGCGCCGCCATGTGCAAACGGATTCGCGGTCCGCACCTTGGTCGAGGCACCCCCACAGGTCCGTGAGTCGCATCCGGACGACCGGATGGGAGGC # Right flank : GCCAATGACACCTACGCCAAATGCGCTCTCGGGGCCGCAGCCTGAATGCCAAGCCCTGCGATTTTCGGTGGTGTCCTGTTCGTCTTGTATGCGGCTACTGATGCGTGGTAAGTAGTTACGCTGTTCGGTCGTGCTTTTCCCTCGCGCGTGTTGGGATCGGTCATGGACGATCTGAGTCGGTTCTGTTGCCGGAATGCGGATTGCCCGGACCACGGGAAGCGGGGGCACGGGAACCTAACGGTGCCGGCCCGATACGGCCCGAGCAACACCCGGGTGCTGCGGTGCTCCACGTGCAAGGCCCGGTTCTCGGAGCGCAAGGGCACGCCCTTGTACGGCACCCGGTTGTCGGCCCAGACGGTGACCGCGGTGCTGGCCCATGTGGCGGAGGGATCCGGCACCCGCAAGACGGCCCGATTGGTCGGGGTACATCGGGACACGGTCACCCGGTACATCCGTCAGGCCGGCGAGCAGGCCCAGCAACTCCACGACGAGTTGGTGGC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCTCGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-11.60,-11.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5868151-5860791 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042911.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================= ================== 5868150 36 100.0 36 .................................... AAGACGCTCCCGACTGCGGCCCTGTCGCTTCACCCC 5868078 36 100.0 35 .................................... ACTTGGAAACAGCGCAGGTCGTCATCGACCTGCGC 5868007 36 100.0 35 .................................... GCCGTCTTCACGATCGCGGGCACGTCGGCCGTGGT 5867936 36 100.0 35 .................................... CACACCGCCGCGACCACACTCACCGTGCCGGGGAT 5867865 36 100.0 36 .................................... TTGGTGCCGGCCTCGAACTGCGTCACGAACCCGAGC 5867793 36 100.0 35 .................................... GCCGAGTTGTTCGGCCGCTTCGACTTGGCTGACCT 5867722 36 100.0 37 .................................... CCCTCCACGGCGGTGGCGTCAGCCCCGCTGGTCGTGT 5867649 36 100.0 35 .................................... TCGAGCGGGGTCGGAAGTGCGCCGCCGATCAGAAC 5867578 36 100.0 37 .................................... TGCGGCGCGCCGACGCTGTGTGCGCCCAGAACACAAG 5867505 36 100.0 35 .................................... TCCGGGTCCGTGCCCGGAACGCCCAACTCGCATAC 5867434 36 100.0 37 .................................... ACCTGTACAGCGTGCGGCATCGGCCCCGCAGAGCCGT 5867361 36 100.0 34 .................................... AACGTGAAGGGCAAGCTACTCACGTGCGTAACGT 5867291 36 100.0 35 .................................... AGCCGGCCCTTGTACCCGGACCCGCTGTCGGACCC 5867220 36 100.0 35 .................................... GGCCGCGACCGGCGCCACGTCGCCCAGTGACGCAC 5867149 36 100.0 35 .................................... TTCCCGATCACGTCCGCCAAGCTCGCCACCCGGTT 5867078 36 100.0 38 .................................... AGTAACTGGGTATCAATCGTCACCACCGAAGGCCCCGC 5867004 36 100.0 38 .................................... TTCCGGGGCTTGCGGGCACGGGGCTCAAAGTCGAAGGT 5866930 36 100.0 37 .................................... CTGCGTTCAAGCAGCACATTACCCGTGTGATGGGCGC 5866857 36 100.0 35 .................................... CTCCTCTGCGGTGTCCTCGTGCATCGCGTGTGCCT 5866786 36 100.0 36 .................................... ACCACGACCACGCAAGACATCTGGGCGGACGGCGCG 5866714 36 100.0 35 .................................... TTGTATGGCCGCGCAGAACAGGGGATGTCGTACCG 5866643 36 100.0 38 .................................... TTCGGGTAGGACGGCGCCCCGTCCTCGTCCTCGACGGT 5866569 36 100.0 36 .................................... TCGGCACCGACCGGAACCGCGCGCAGGGGCTCCGCG 5866497 36 100.0 34 .................................... ACGGGCCGGCTCTCGTACTTGGCGAAGTCGCGCT 5866427 36 100.0 35 .................................... ATGCACCAAATCGCTTTGGCCCGACCGCTATCCGG 5866356 36 100.0 36 .................................... CCACTTCGCCACGGCCAGCGCCCACGCGGTCGGCCG 5866284 36 100.0 35 .................................... GTAATAGTCCCAGCACTCCGAGCAGCCAAGATATT 5866213 36 100.0 35 .................................... AACAACATCCGCAAGCCCCTGCCCATCCCGGTCGT 5866142 36 100.0 37 .................................... CAAGCCCGGCTCGGACGACCCATCACCCTGAACGATC 5866069 36 100.0 34 .................................... TTATCCACGCCTGGAACTGGGTCGTGTCCTTGCC 5865999 36 100.0 35 .................................... ATATCTGACTGGTTGCCGAAAATGAAGATTAGGGT 5865928 36 100.0 36 .................................... TCCACTTGTTCTTGGTTGCAACTTCGAAGATTTGAT 5865856 36 100.0 36 .................................... GTGACCCCGTAGGTGGAATCTTGGGTGCTGTGGACC 5865784 36 100.0 36 .................................... GCGTCGAACATCCGGGTCTGGAACACGGTCGAGATC 5865712 36 100.0 34 .................................... AACTGGTCGAGCGGCGCCGGCACCGCGAACGCGC 5865642 36 100.0 38 .................................... GGCCTGAGTTGGCTAAACGGTGGAGTGGGGCGTGGGGT 5865568 36 100.0 36 .................................... CCGTCCCGGAACAGGATGCGGGGCACGCCCTCGTCG 5865496 36 100.0 34 .................................... TGGGGCCTGCTGTTGTGGCTCTCGCACCGCGGCG 5865426 36 100.0 35 .................................... TGTGCGCGGCGGAAGCGCGTACAAATTGTGTGCTC 5865355 36 100.0 36 .................................... GCGCGGTACTCCAGTCTAACCCTGAAGCGGGTGCGG 5865283 36 100.0 35 .................................... TGATTGTGGACCTGAGCAGCGTGGCGTCCGCAGGT 5865212 36 100.0 35 .................................... CTCTGCCCCGCCCGGGGAACGCGGCCGGTCGCCCA 5865141 36 100.0 47 .................................... GGCCCAAAGACTAGAAGCACGTCACAGCCCGGCCCGGGCGAAACCAG 5865058 36 100.0 35 .................................... ACCCGTTCTGGAGCACGCTGCGGCCCAAACACGAC 5864987 36 100.0 34 .................................... ACCAGCGCCAACGGACGGTGCGTGAGCCGGTGCA 5864917 36 100.0 38 .................................... TACAGCGCCGCCAGCGTCACCCCGCTCTGGGCGAGGCC 5864843 36 100.0 37 .................................... CCGGGGTTCTTCGCGGAGAAGATCGCGCGGCACCGCA 5864770 36 100.0 35 .................................... CGGTAGGCCGGCTGCTCGTCCGCCAGTGTGCCCCG 5864699 36 100.0 38 .................................... AGCGCCACCGAGCGGGAGAACGTGTGGGAGTGGTGGAC 5864625 36 100.0 33 .................................... AAAATGCTTTCCTTGCTACGCCGAATATGTCGG 5864556 36 100.0 36 .................................... GACGAGGCCGTGGCTCGGTACTATCGGGAACGCAAC 5864484 36 100.0 36 .................................... CAAGCGGGCGCGAGACTGACGCGGGCGCGGGCGCGG 5864412 36 100.0 33 .................................... GCCTGACGGGTCGAGCGGCGGTCGGACGCGAAT 5864343 36 100.0 36 .................................... ACCCACGAGACGCGGACGCAACGCCGCTACCCTGGT 5864271 36 100.0 35 .................................... GTGTCGCCGAGCTGGAATCGATCCTGGCCGCGGTG 5864200 36 100.0 37 .................................... GTGGCCCGCGCAAACGGGTCCGGGGGCGACTGCGCGC 5864127 36 100.0 35 .................................... GCGAGAGCGGAGGGCGGCGGAACCGTTGGCACCGT 5864056 36 100.0 34 .................................... ATAGCCTGAGCCCACTTAGGTAGATTGTTGATGT 5863986 36 100.0 35 .................................... TGCTCCCGATCCACCTGACAACGAGGCTCTCTGGT 5863915 36 100.0 36 .................................... CGGGACTACAATCGGTGGGCTTGGGTGGCGGTTGGT 5863843 36 100.0 35 .................................... ATAGCCAAGTGGACCGAGGATAAGAGGGCTCCCCT 5863772 36 100.0 35 .................................... ATACCCGTTCGATTTCACACTAACCTCGACCTGAT 5863701 36 100.0 36 .................................... CTGTGCCTGAACGGCAACAACGGCATACCGTCCGGA 5863629 36 100.0 35 .................................... CCCAAATGCCGCATCGCCAGGGCGAGCGCGGAGAC 5863558 36 100.0 34 .................................... AGCGCACCGCAGTGGTACGTGTTCCGCTGGGGCA 5863488 36 100.0 35 .................................... ACCGTAATATCAGACCGCGAGGGCAAGCCCGCGGC 5863417 36 100.0 34 .................................... GCAGTGATGGCGGACCGGTACGAGCGGGGGCAGG 5863347 36 100.0 38 .................................... GCTCGCCCGGCCAAACCTCACACCACCGCGGCAGTCCT 5863273 36 100.0 35 .................................... GAGCGGCTCGCGAAACTCGACTTCGCCGCGGTGGT 5863202 36 100.0 37 .................................... TGCCACGTTGCGGACGTTGCGGGAGGCATGCCCCGAT 5863129 36 100.0 34 .................................... CTTCGTATTCAAGGACGAGCGAAAGTACCACTGC 5863059 36 100.0 34 .................................... GCGGGGGCCGGTTTGTACTCGCGCGACGACGAGT 5862989 36 100.0 36 .................................... TCCGTCCCCCCGGCCGGGTATCCGGGGGCACCTGTG 5862917 36 100.0 35 .................................... ACGGTGCTGTGGGTCGACGGGTTCCGGGTCGGCAC 5862846 36 100.0 34 .................................... CGGGCCATGTTCCCGATGGAGCCCGGTACGAAGT 5862776 36 100.0 35 .................................... GCGTCATGTCGCGGTCGAGCGGGTCGTTGTACGGG 5862705 36 100.0 38 .................................... AACTGGAGGTCGTAGGTGCCCTGGTACGGGTCGGTCGC 5862631 36 100.0 36 .................................... GGCATGATCGCCCGCATCGTGGCCCCGCTCATCGCC 5862559 36 100.0 35 .................................... GACGCGGGCTACCACCCGGTCATCGCCCTGCCCCT 5862488 36 100.0 37 .................................... CTTCGCTCGGCGAAGCAGATCCGCGCGCTGGCGCCGT 5862415 36 100.0 35 .................................... CAGCGGGTGGTGAACGAGTACTACGGCATGTTCGT 5862344 36 100.0 36 .................................... GACTGGCAGGTGGGGCACTGCGAGGTGAAGCCCGAC 5862272 36 100.0 36 .................................... GCCCGCGACCGCGAATCGCTCACCCGGGGCGAGCGG 5862200 36 100.0 35 .................................... ACAGCCGAAGCGGCCCGCGTACGCGCGGCCCTGGA 5862129 36 100.0 34 .................................... GGCACACCGGACCCCATCGACAGCAGCCGATCCG 5862059 36 100.0 38 .................................... TCGTCTTCTTCGGGCTCTCGCGGCTCTTCCTCCTCGTC 5861985 36 100.0 36 .................................... CTTCCACTTGACGATAACTGCCGTCCGGCTGACGTT 5861913 36 100.0 35 .................................... TGGTGGCGAAGGCCCGGCAGGCGCGGGCCGAGGGG 5861842 36 100.0 36 .................................... TAGATCAGACGTGAAATGGGAAGTGCGAATTGAGGT 5861770 36 100.0 35 .................................... ATTCCGAGTTCGACCGCAACGACCCGCCGCACGCC 5861699 36 100.0 49 .................................... ATGGCGTCGTAGTGCGACTTGGCCTTCAGCACGGCGGTGCTGACGCCCT 5861614 36 100.0 36 .................................... ATGCAGGCGGCCATTCTGGACGAGTTGACCACAAAG 5861542 36 100.0 35 .................................... AAGCAGCGAATCATAGCGGGCACACAAACCCCGAT 5861471 36 100.0 37 .................................... CCGAGGCGGACCCGGCGGTCGGTCCGGAGTCGGTGCT 5861398 36 100.0 35 .................................... CCCGCGGCGCCGAGCGAGACGAGCTGCGGCGGGTC 5861327 36 100.0 36 .................................... AACTTGAGGTGCGGGTGGTCCCACACCAACTCCGGT 5861255 36 100.0 36 .................................... CGAACCCTGTGCCGGAGTCTGATCGCCCCCGCCGTT 5861183 36 100.0 35 .................................... TCGTCTCGTGCCGGGTGTTTCCTCTCCACATCCTT 5861112 36 100.0 35 .................................... TCCTGCCCGTGGCTGGAAACGGCACCTTCGATCAT 5861041 36 100.0 35 .................................... GCGGCGGTGGGTCAACGGAGGGCGCGGGCGTGACG 5860970 36 100.0 36 .................................... GGCTATTCGAAGGGCTGATGCAGTCCGACGGGCACG 5860898 36 100.0 36 .................................... TGACCGCGACGGCCCCGCCGAGCCGGTCTCAGCCCG 5860826 36 97.2 0 ......G............................. | ========== ====== ====== ====== ==================================== ================================================= ================== 103 36 100.0 36 GTGCAGACTTCAGTGACGCCGTGAGGCGTTGAGCAC # Left flank : GTGCGCCCGGCACATGGAGGGGTACGGGGAGCGGGTCCAGTACTCGGTGTTCCGCTGCTGGATGAGCCAGACGCAGGTGGAGCGGCTCCGCTGGGAGCTGACGCAGTTGCTCGCGTCCGAGGACGAGGTGATGCTGATCCCGCTGCCGCAGGCCAGCGTGGACGGGATCGTGGGCATCCACGGGTCGGACCGCCCGCCGGAGTGGACCGCGGAGCCGCCGCGGCACCGGATCGTGTGAGCGCGAGGCCAATAGAACCGAATCACGCACCCGCGTGTGTGTGCCGGGTTCCATCATGGGACCGATCCAAACCTGAGTTGCGGTCTGGGTTTAACGCTCTTTGACAACTCGCCGGGGTGCTTGACGGCCGTCTGGGCCTTAAAATCCGTGTGAAGCGTGCCGCGCGTGGTTGGTGTCGGTCGTGCGGTCACGATCGGAGCGGTGTGGTGCGTGAAAACGGTTGCCCGGCGCGGCCGATTTTGAGCATTTCGGTAAGTGAGCG # Right flank : CCTATTGCGCGTTGCGTTGATTTCTTCACGCGTTGTGCAGACCACAATGCGTGAAGAAATCAACGCAACGCGCAAGTACTTGTTTAGCGCCCCGTGAGTTGGCGGGATGATTTCCTGCCCCCCCCCTGTGGCTACGATAGCAGGTCTTCCCGACCGAACGTGAACGCCGAGGCGATGGCGCACATGTCCCCGTCATCAATGATCTGGAACGTCAGCCCGACGAACTGGCGGACGCATTCGGGGACGCTCGGCGATCCCAGGGCTGCGGACACGGACTTGCCCCGTCGCAGTTCGGCCAGGAAGCCGTCGATCAGGGCGGTGCGGGCTTGGCAGCGGGTCATCGCCCGGTGGTACAACTCGAAGTGGCTGACGAACCCGCCCCGCCCGTCGTCGTCGCTCTCCTCAGCCAGCACGATCTCGTTGACGAGCCGACAGCCGAGCGGGTCGGCGGCGGGGAGCCACGGCACATCGGTGCAGCAGAGCCGCCGTTGGAGCGCCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCAGACTTCAGTGACGCCGTGAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 3 8022313-8008656 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042911.1 Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================== ================== 8022312 36 100.0 35 .................................... GTGACGTGGGGCTCCATCTCCCGGCCACGATCCGC 8022241 36 100.0 36 .................................... CTTGTGGCTGAACTTCACGTTGGCTGCCAGCCACGG 8022169 36 100.0 36 .................................... TTCGCATGGCCGGGAGGACGCATGAGCAACGACGAC 8022097 36 100.0 35 .................................... GTGCTCCCGGAGCCCACCGGCCGGTGCTTCGCCAT 8022026 36 100.0 38 .................................... AAACACACCAGGGAAGGGGTGACGGTATGAGTTATCCG 8021952 36 100.0 36 .................................... CTCGACCCGCACCCCCTCTTGGATCGTGTCCGCGTT 8021880 36 100.0 38 .................................... CTGGCCCAGTCCGGCCGGATGTTGTGCAGCCGATCGCC 8021806 36 100.0 36 .................................... GCCCGGCCCGTGCTCCCGTGCGGCCCGGGTCAGACC 8021734 36 100.0 37 .................................... TCTGCTTCGCGTCCTCCGGGCTGTCCGCCTCCACGCG 8021661 36 100.0 35 .................................... GTGGACACCCACGAGCCGGTCGTGCTCGTGGTGTC 8021590 36 100.0 36 .................................... CAGTGCCCGCACTCGGCGTAGATCGGCTCACCGTCC 8021518 36 100.0 36 .................................... GTAGCTCCGGCAGTGTCACAGCTTATCAACATCTCA 8021446 36 100.0 37 .................................... TCGGCTCGCGGGCGCGACGATCTTGCGCGCGATGTAC 8021373 36 100.0 37 .................................... CGGGTACAAGCGGCAGATCGACTCGCGCATCGTGCCG 8021300 36 100.0 38 .................................... CGCAAGGGGTACGGGTGGCAGGCGTGCAAGCGGGGCGC 8021226 36 100.0 37 .................................... TGCGGTCCGTGCCCGACGGCCCCCACTCGTCGCCGAA 8021153 36 100.0 39 .................................... TCCTTGATCGCGGCCCGCACCAGCGGCGTGAGGGGCACG 8021078 36 100.0 36 .................................... GACCTGGTTTTCGCTGACCCGGACGAGTCGGCGGGA 8021006 36 100.0 36 .................................... CATCCTGAAGTGCGTCGGATCGACGTGGGATTGGGC 8020934 36 100.0 39 .................................... TACGCTCTCGTCCCCGCCGTTCTGCTCGCCCTCCTGACC 8020859 36 100.0 37 .................................... CCCACCGATTCGGCGGCTTGTCGCCCCGCGCCTTGCG 8020786 36 100.0 42 .................................... CGCGGCTCGGTACGGCATGGCACGGCTGAGCGGGGCATGGGC 8020708 36 100.0 37 .................................... AATGAAAGTCCGGCCGTCGAGGATCGGGGTGAGCAGG 8020635 36 100.0 38 .................................... GCCGTCGAGCGCTCGCTGGCGGCCGAGATCGCGAGCCG 8020561 36 100.0 38 .................................... CAGGTTTTGGGCCTCGTCGCCGATAACGATTTGCGGTC 8020487 36 100.0 35 .................................... TTGGTACGGAACGCATTTCAGCGGAGGCTTGTAGT 8020416 36 100.0 36 .................................... ACGTTAAGGCATCATCAACGTCCTCAACGGCTCTCG 8020344 36 100.0 38 .................................... CTCAGTGTTGAGGTTCACATCCGGGACGGCCCCGACGC 8020270 36 100.0 37 .................................... CGGCGTAGATCGCCGGGTCGTCACTGCACCCCCGCGC 8020197 36 100.0 36 .................................... GGTGCTGGACCGGCTTGACGAGGTCGTGGGAACGGC 8020125 36 100.0 36 .................................... CCGACGATCGCCCATCACGCAAACGACGTGCTGCTT 8020053 36 100.0 38 .................................... GCGCCGCCCGGCGTGGGCGAGCGGCGGAAGCGCGGGGA 8019979 36 100.0 37 .................................... AGGAGCACGTGTGGGTCGCGGGCAACCTCGACTTCGC 8019906 36 97.2 37 ..........A......................... TGCCCAGGTTGCGGTACAGCGGGTGCGGATCACGGTA 8019833 36 100.0 37 .................................... GCCGCCGACGATCGATACAGCCCTGGACAAGGTAGCA 8019760 36 100.0 36 .................................... CGACGCCCTCGGGAAGCTCGCGAACTACCTGGGGCT 8019688 36 100.0 37 .................................... GCGGCAAAATCGAGATGCTGAGTGCGGACGGGGTGTC 8019615 36 100.0 36 .................................... CTCCTCCGGCTTCACGCCGCTCGCGCTCCCAATACT 8019543 36 100.0 37 .................................... CGCTGGCGCCCGTGACGCGGCGCTTCGAGGACATCGT 8019470 36 100.0 36 .................................... GGTCAGGCTGGGCACCGCCGGGGGCAGCGCGGTCGG 8019398 36 100.0 36 .................................... CCTCCGAAGCCGGTCAAGCCCGCGGCGCCACCGCCG 8019326 36 100.0 42 .................................... GGTGAGCGGGGTGCGCCACCACGGCTGGCCCGCGTTCCGCAT 8019248 36 100.0 36 .................................... GGGCTGGTGCAGGGGTTCGCGCCGCCCACGCAGCAG 8019176 36 100.0 37 .................................... CGGGCTGGTGCAGGGGTTCGCGCCGCCCACGCAGCAG 8019103 36 100.0 36 .................................... GGAGGCGCGGCGGCTCACCGGCATCGAGCGGTACGG 8019031 36 100.0 36 .................................... CCGTTCCTCGCGCAGCACGCGGTGAAAGTGCTCGTG 8018959 36 100.0 36 .................................... GCCGATGGTGGCCTGAAAATCGCGCATGGCCTGTCC 8018887 36 100.0 36 .................................... GGGGCCGTTCGCGTGCCCACTGAACGAGTGCGAGGA 8018815 36 100.0 36 .................................... GTCGGTGAGCGAGGCGATGTCGCGCGGCGTGAGGCC 8018743 36 100.0 36 .................................... AGGGCCGGACGGGGAACGTCCCCGCTCCGGGTATCA 8018671 36 100.0 36 .................................... CTCGTGTTCGTAAAGCAGGGCGGCTTGGCGGTTGGT 8018599 36 100.0 37 .................................... GCCGCGGCCCGCCGAGTGGCTCGCGGTGGTGCCGGTG 8018526 36 100.0 38 .................................... CGCGGCCGGGTGGGAACGCGGCGTACATCGAGCACCTG 8018452 36 100.0 38 .................................... GCGATGGTCTCAAGATGCTTGCAACGACGGTGCGACTG 8018378 36 100.0 37 .................................... TGCTGTCCCCGCGCCCGGTGCGGATGGTCCAGTCCGT 8018305 36 100.0 36 .................................... CCCCGGGCACGCTGTTCTCGTTCTGGGGCGGTGGCG 8018233 36 100.0 37 .................................... TCCATCCCAGTGCAACGCCAATCGCGACGCCCGCGGC 8018160 36 100.0 36 .................................... GCTGGCCCCAGGTTGCCCCGTGGCGTGCCACGAACT 8018088 36 100.0 37 .................................... CGGCAAGCCGCTGACCCAGCCGTTCGACCCAACGACG 8018015 36 100.0 37 .................................... ACCCGTCCAACAGTTCGGCGGCCTTGCGAATGTGCCC 8017942 36 100.0 38 .................................... GACGAGGCGGCGGTGGAGATGTTCGCGGACAAGGTGCT 8017868 36 100.0 37 .................................... GACGGTCAACAGCGACCCGGGCCCGGCGAATTCGTAG 8017795 36 100.0 35 .................................... TCGAAGTTGGCGCCCAGGGCCTGGGGTGCGGCCGT 8017724 36 100.0 36 .................................... CCAGAGCGCGAACACGTTCGAGGTCCGCAACAGTTC 8017652 36 100.0 36 .................................... CTGACGCTCCCTGAGGTGTCGAGTTTCCGCCGCGGC 8017580 36 100.0 38 .................................... TTCATCCTGCGCGAAGCGGGCGACAGCAAACGATGCCC 8017506 36 100.0 36 .................................... GGTGGCGGTGGGTACGAAGTGGAAGATCTGGCTAGA 8017434 36 100.0 38 .................................... GTGGCAGCCCCAATAAACCCTCGCTGCATGGCTGCGTG 8017360 36 100.0 42 .................................... CCCTCGGGACCGCCGGCAGTTTCGGCACCGCTGCGCTGCACC 8017282 36 100.0 36 .................................... CGAGGCGGGCCGGGTCGAGGACCGCGAGGAGCTGAC 8017210 36 100.0 36 .................................... GCGAACGATCCATGTCATCATGTCCGCAGTGTCGTC 8017138 36 100.0 35 .................................... CTTGCACGGGACATTCGGCCATTAACACACCACTG 8017067 36 100.0 35 .................................... TTCGCTGCGTTACAAACTTGGTTTGACGTCCGGCT 8016996 36 100.0 36 .................................... ACGATCGCACCGTTCAAAACGCGCTTTCGAAGGCCC 8016924 36 100.0 35 .................................... ATCGAACTGAACCCTGCGTATCACGAACTGATTCG 8016853 36 100.0 36 .................................... GCCGGTGCGGTTTGCGGCCTCAGAGAGCGGCCCCAG 8016781 36 100.0 36 .................................... CAACGCCCAGGTGCGGATCGGGGTGCTGATGGCCAA 8016709 36 100.0 38 .................................... CACAACGCCCAGGTGCGGATCGGGGTGCTGATGGCCAA 8016635 36 100.0 35 .................................... AGGGGTTGAACTGATTTGGATGGTCATTAATCGCG 8016564 36 100.0 35 .................................... ATGGTGCGCCTGCCGGAGGCGTACCGGGACAGGCT 8016493 36 100.0 36 .................................... CGGGCGGACGCGCGGCACGCCGCGCGGCAATGGATG 8016421 36 100.0 36 .................................... GAGCGTCACGTCCTGGTGAGCGCCGGCGATCGCCTG 8016349 36 100.0 34 .................................... AAGGCGGTTCCGCCGGGGACCACGGGCCGCGCAT 8016279 36 100.0 35 .................................... CGCGGGGCTCTCACGTGGCCGATCCCGTCAGCGCC 8016208 36 100.0 37 .................................... TTAACTGAATCCAATCATTAGGGAGAGCGTGCGGGAG 8016135 36 100.0 38 .................................... CCGGGGTACGCGCCGTCGTCGTCCGCGAAGTAGTCCGC 8016061 36 100.0 35 .................................... AAAGATTCGTTCGCGATCAAATCGCACCGCCTGAT 8015990 36 100.0 35 .................................... CCGCCCACCTCGGAGACTCCCGCGTGACCCGCGAC 8015919 36 100.0 37 .................................... GCCCGTTCCCGCGTCGCCGATGCCGGCCCCCGCGCCG 8015846 36 100.0 38 .................................... GTCTTTCAGGCTCATGCGGACATCCTGAAAGTGCAGTG 8015772 36 100.0 36 .................................... ATCCGTAGACGTAAATAAAGATCAGGTCGCGGCCCG 8015700 36 100.0 38 .................................... TCGATCTCGACGCGGCGGACGGCACCGCGGAGTTCGCA 8015626 36 100.0 37 .................................... TCCGCTGGGTCAAGACCGGCACCGAGCAGGGGGCCGA 8015553 36 100.0 39 .................................... CCCGGCGGGGAACGTGGTCCGCATTGAGGTGCGGTGGAT 8015478 36 100.0 36 .................................... TCGTAAGCGGCCCACTGCTCTCGCGCTGCCGCCACC 8015406 36 100.0 37 .................................... CCGACACCGACCGGCTGCGGTCGCTGCTGAGCGACCT 8015333 36 100.0 37 .................................... GCGCCCACCAGTGCCCGGCCTACTTCGATCCGAGAGC 8015260 36 100.0 37 .................................... CTGGCTGTGTGCCGGTCTGAGCGACTCCCCACCGCAC 8015187 36 100.0 36 .................................... GCAACCGGGTCGGTGAACGTGGCGGCATGAGCAACC 8015115 36 100.0 37 .................................... GGCTACATTGGTTGTCGAATTAGTGCCGTTCTTTAAG 8015042 36 100.0 35 .................................... CCGCGCTCCAACGGTAGCACTGTTCGAGCCCGCGT 8014971 36 100.0 36 .................................... CGGGCTGCTGGTGCTGCGAACCTCGGGCCAGGTGGT 8014899 36 100.0 36 .................................... TTCCGGTGACCGCCCGAGCTATTACGTTTCCATCAT 8014827 36 100.0 36 .................................... CTTCCGGTCGAGAACGCCCCCGCCGCTCCTACCGCG 8014755 36 100.0 36 .................................... AACCTCATCTCGCGCATCAACGCCTCACCCGAATCG 8014683 36 100.0 36 .................................... GCGGGGGTGGACGCGGGCGGAGATACGGAAGCGGGT 8014611 36 100.0 38 .................................... TCCAGCGACCCCGCCATCTCAGCGCCCCGTGAGTGAGT 8014537 36 100.0 37 .................................... CCGTCACAGGCGCGGGCGAACGAATGTACGCCCCGGG 8014464 36 100.0 38 .................................... CCGGGTGGTCCAGGGGTACCGCCCGAACGGCGGGGCCT 8014390 36 100.0 37 .................................... TTCAGAAGCTCCTTACTGCCGTCCTCGTACTTGGAGC 8014317 36 100.0 34 .................................... TACAACTTCTGGGCGGAAATCCGCGGAGTTCTGT 8014247 36 100.0 49 .................................... TCATCGCGGCCCTGGCCCGGGTGTACGGCCACGCGCACGGGACGGTCGA 8014162 36 100.0 36 .................................... GGCGCGGAGCAGGTTCAGCTCCACTTCCGTGCGGTA 8014090 36 100.0 35 .................................... GCGGCGCTGGTGGACGCGGCCGGGTCGCACGTCTG 8014019 36 100.0 38 .................................... TTCTCCGCGGGACTCATGCCGGCGAGCCGGAAGCCGAA 8013945 36 100.0 35 .................................... GCTGCCGGGCGAAGACAGCCAGACCGCTTTTGGCC 8013874 36 100.0 35 .................................... CGCGCGACTCGCAAACCCCGGCGTGCCGGACTGCG 8013803 36 100.0 37 .................................... GCGACACCTCGGGGTAGTCGGCCGCGAGAAGCTCGTT 8013730 36 100.0 35 .................................... ACGTCCGTCTGAGGTGCGACATGCCCGCGTACATC 8013659 36 100.0 38 .................................... TCGATCGCGGTGTCGTGGGCCGAGGAGAAGGCGAGCCG 8013585 36 100.0 37 .................................... CACCTCGCCCGCGTACCGCGAGTGGCAGGCGAAGGCG 8013512 36 100.0 39 .................................... CAGGACACCACCGTCAACGAGCTGTGCAAGCGGTACATG 8013437 36 100.0 40 .................................... TGCGAGCCTGCGCTGAGGGCGAGACGGTGACGATCACCGG 8013361 36 100.0 36 .................................... CCGCACGAGCACCTGCGCGGTGGCAACGGGGATGTC 8013289 36 100.0 36 .................................... GACCGACGCGCAGAAGGCGGCCCTCCGCGCCCACCT 8013217 36 100.0 36 .................................... GTCAGCCACCCCGTGCCCCCGGCGGCGGTACATCAG 8013145 36 100.0 39 .................................... CGCGGGCGTTCGGTCGCCGGGGTTGTCCCCGCACGCGGC 8013070 36 100.0 37 .................................... AACCAAGGAGACGGAGATGCCCCGGAATACGGACGTG 8012997 36 100.0 36 .................................... ATGGGCTCTCGACCGCGATTCGTGCAAATGCTGCGT 8012925 36 100.0 36 .................................... GCCGTCGTCGGTGTGGGCTGGGTAGGAACCCCGGTG 8012853 36 100.0 39 .................................... CCTCGGCCCCGGGCCATCGTGTGCGACCACGACGAGGAG 8012778 36 100.0 36 .................................... TTCGCCCGCTTCCGCTTGGCCCGCGGGGGTGTCCGC 8012706 36 100.0 36 .................................... TCGACGGCGCTGTTCCAGATCACCCTGCTCGGTCTG 8012634 36 100.0 37 .................................... CGCCGCCCCAGTTGGTCACGTCGGGGGAGCCGGACTT 8012561 36 100.0 35 .................................... GCCGGCAGTCCGTTCGCCTGGGCAAGCCGCCGCAC 8012490 36 100.0 36 .................................... CGTCAAGCCGGCGATCAAGCGGGCCGAGGCGATCCA 8012418 36 100.0 36 .................................... GGCCGGTCTGTGCGTTGACGAGCAATGCCATGGACG 8012346 36 100.0 37 .................................... GGCTCGGTCTTGGGCAGAGGCTAACGGGCACGAATTC 8012273 36 100.0 40 .................................... CCCATCCAGTGAGAAGTCGTCCGCATTAAACTCTTCGCTG 8012197 36 100.0 38 .................................... TCTGCAAGTCAGCGTCAGGTATGACCAGAACTTCACAC 8012123 36 100.0 35 .................................... GCCGTCTCTGAAGTAGGGTGAGATCCACACTTCCC 8012052 36 100.0 36 .................................... ACGGGGCCAGGATCTGTGACAGCTCCTCGGCGCTGG 8011980 36 100.0 35 .................................... CACATCCCCGCCCGCACGCTGGTGGTGAGCGACCT 8011909 36 100.0 36 .................................... GACCAGTGCGGAATACCAGTTCGACCACCGGCAGCG 8011837 36 100.0 35 .................................... CCGGGCCGCTGATCCAGGCCGCGGCCGAATTGACC 8011766 36 100.0 38 .................................... CCGCGCGTTGGCGTTGGGGCTGGCTGGCGTCAGGGTCA 8011692 36 100.0 38 .................................... CATCACTTGCCCTCACGGATGGCCTTGCGGTAAAGCTG 8011618 36 100.0 35 .................................... ATCGGCCGCACGTGCCGGCCGCTCGGGGGCAGGCT 8011547 36 100.0 52 .................................... TTCTGAGGCGGCGCCGTGTACCGCGGAATACGTGTGCGCAGTTGCGAATTGG 8011459 36 100.0 38 .................................... CCGTGCGGTGAAACTCCAAACCTGTCAGACGAGCCGTG 8011385 36 100.0 35 .................................... GTGACCGCGACTCAAACCAAAGCGGCCGCATACAG 8011314 36 100.0 36 .................................... GAAACGCTATACACAATCGCTCAACGCGAGCAGACG 8011242 36 100.0 36 .................................... GCGGTTCCGGGCAAGGGCCAGTTTACGCCGTTCGTG 8011170 36 100.0 38 .................................... ATCGCCAGCCGCCACAGGCCCGCTTCGCACGTCAGTGT 8011096 36 100.0 39 .................................... CTGGCAGCGGGCCTGCAAGGCGGCCCACCCGGGTGCGAA 8011021 36 100.0 37 .................................... CTGTGCCGTCCGGTGTAGTGCCTGCGGTTAAGTCAGA 8010948 36 100.0 36 .................................... TAGAGCCGGGTATTAGCATCACCACCAAACCAAGTA 8010876 36 100.0 36 .................................... AGCCGAGCTAGCTGCTGGCCGCGCAAGAACCTTTAA 8010804 36 100.0 36 .................................... CTGTTCAACGTCTTTAGGGCAGCGAGCTATGGGAGA 8010732 36 100.0 36 .................................... GGTTGCACGGCTACCCTGCACACATGGCCAAGTCGA 8010660 36 100.0 37 .................................... AAGCCGACTCGTGGCGGACGGACCTGGGGCACAAGCC 8010587 36 100.0 36 .................................... GTACTGCCCCCGCGGAAAGCCTTCTAGCTCGGTGAG 8010515 36 100.0 39 .................................... CCCTTCTCGGTCACGGCGGCCCGCGCGGCCGTGTTGACC 8010440 36 100.0 40 .................................... ACCCGTCCGGGCTCGCCTCGAACGTCACCGCGAGGCTCGT 8010364 36 100.0 36 .................................... CCCCGACTACCTCGCGGGCGTGCTGATGGGCAAGCA 8010292 36 100.0 41 .................................... CGGCTGCGGGTGGCGGTGGGGGCGTACAACCAGACGCACGC 8010215 36 100.0 35 .................................... GCCCGCGAGCTGCTCAGCGGCACGGCCGCCAACGG 8010144 36 100.0 36 .................................... CTGTTGGAGAGCTTCCTTTTCCTTGGCCGTGCCTTG 8010072 36 100.0 34 .................................... AAGTGCTTCGAGTTATTCGGACGCAGTCTTCGCT 8010002 36 100.0 37 .................................... GTAGTGGTCAAGGGCGTCGAGACTGTCGCGGCGGCCA 8009929 36 100.0 36 .................................... GAGGAAGAGGACGACGAAGAGGAAGCAACTAAGGTC 8009857 36 100.0 37 .................................... CCGAAATATCGAATTTGCGGTTTACACCGCAGAGTGT 8009784 36 100.0 36 .................................... CCGATCGACGGTAAGTTTGTCATAATACCAGTTGAC 8009712 36 100.0 37 .................................... ACGGCGGTAGTGGAATAAACGTGTGCGATCGCTGGCT 8009639 36 100.0 38 .................................... AAGGCCACCGCTGCCGCTTGACCCGTGGCGATTTGATT 8009565 36 100.0 37 .................................... GCATCGGTCTTCTGACGAACTTCGACTTGATCCTTCA 8009492 36 100.0 38 .................................... TGCATCAGGGCGGTAGTCATTTTGTCGAGACAACGCTG 8009418 36 100.0 40 .................................... TCGTGCTGTTCTACGAGAAGTGGCCGATGAATGGTGGCGA 8009342 36 100.0 36 .................................... GCTCGTCCCCGGTATTCAGAAGTTGGTGGACGAAGG 8009270 36 100.0 38 .................................... GCCGAGGGATTCCAACTCGCGTAGTCAAGGTAGAAGTT 8009196 36 100.0 36 .................................... TCATTGTCTTCAACTTGAATGTACGTTGGCACTGCG 8009124 36 100.0 34 .................................... TCAGCCGTCGCAGGGCTGACAGTCTCGCCGCCCG 8009054 36 100.0 36 .................................... CGGAATCCGCGCGACCGGTGCCGGTATAACCGTCAG 8008982 36 100.0 36 .................................... GTTATCGTCAAAGATCGCATAACCAGTGCCCAACTT 8008910 36 100.0 36 .................................... GGCAGGAACCGAAGTTCCTGCCTTGCAAATTTCAAT 8008838 36 100.0 37 .................................... CCTTCACGAAACGGGTGCTGAATGGGCAGCACCCGCT 8008765 36 100.0 38 .................................... CTGCTCGATGCGGATGAGTACACGGTGGAGCCGCTGGA 8008691 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================== ================== 188 36 100.0 37 GCTTCAATTCGGCCGCGGCTATGAGCCGCGGAGAAC # Left flank : CAACCTCCAACGCGACGACCTGCTCGGCCAGTAACCGCAGGCTCCAGTTGGCGAAGCCCTTGGGCGGCGGACCCAATCGCATCGCGATGACTTGGGCTTCCTGTTGGCCGTCGAGCAACTTGGCTCGCGGGGGCTCGGCCCGGGGTTGGCCGTGGAGTGCCACCTCGAACCCGCTCGTCACCACGCGCTCCCGGATATTCTCCACGGTCTTGGTGCGACATCCGACGGCCTCGGCAATCTTCGCATCCGTCCAGCCCGGGCCATCGGCATCGGCCTTCAGAAGAATCTGGGCCCGACGAACCTTCTGCGAGGATCCCTTGAGTTTCTTGACCACCTCCGACAACGTGGCCCGTTCCGCATCCGAAAGACGAACGATATACTTCTTCATCACGGCGGCACCTCACGGGGGGGGCTGCCATCATACCAATGGACCCCGTGGCATCCTAATTCGTTAGCCTGACACAGCACTAGGGCGACGGATAGCAAGGCGCGGCCGAGGA # Right flank : TTCGATTCTCAGAAATTATATCGTCGCAACGGATTATCGCAATCTCCGCGAGCGGTTGAGCGCGAAACGCTGTCATGACGTAAACTCTGGGACACCAGTTGCCACAACCCGCTGACCAAACCGTCGGTTGCGACTTGCGAGCGGTGGCGAACTGGCGCCCGGTGGAAACTCGTTAGTTGTCAAAGACCTTCGGCGCGAAACGCCCGACGACGCGTTTCACCACCGGGCCGCTCGCGTGTCAGATCACCCGGTCAGGCCGGGCAGGTTCGGCGTCTTGCCGACCAGAATGCGCGAGGTCCGGAACACCGAAGTGACCCTGAACCCGCGGAGCAGATCGGCCTCCCAGGATTCGGTCTGGAGGCCCCGCAGGGACAGCATTGAGGCCGCCCCGTCGGCTGTCAAGCACGAATCCCACAGCGGCCACAGCCAGAACGTACTCGCCGCGCGGTTGCCCCGGAACCCGCGGGGTGCGCACGCGGTCCCCGTCCGGGAACGACGGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATTCGGCCGCGGCTATGAGCCGCGGAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-14.90,-15.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //