Array 1 1404-406 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MPYG04000154.1 Klebsiella pneumoniae strain CRK0165 CRK0165_NODE_49_length_28412_cov_22.3749_ID_99, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
      1403	    29	 100.0	    32	.............................	TGAGGAGCTCGTTGACCTGCAGGCACATCCCT	
      1342	    29	 100.0	    32	.............................	TAATTCAGGAAATGAATTCTAAAATCGACTCT	
      1281	    28	  89.7	    32	.....-......CA...............	GCCATGCAACGTCTGAACGTCCGAAACATCCC	
      1221	    29	  93.1	    32	............CT...............	CGAATCCTCAGCGCGTGTCACGGTGACTGACC	
      1160	    28	  89.7	    30	.............A..T....-.......	TTACTTTAAGTAGTGCATTTTTTTGTGTTT  	
      1102	    29	  93.1	    31	............CT...............	TTCCCTGCACTAAGACGCTGGTGGTCGCCAC 	
      1042	    29	  89.7	    32	............CA............T..	CCGGTTCGGATTTTGCGAAACAGGTGCAGGGC	
       981	    29	  96.6	    32	.............C...............	GCTGGATTTCCGTCAGTTGGTCAGCTGCTGCT	
       920	    29	 100.0	    32	.............................	AATCGACATCTCGTCCGTGGATGCGAAAAACA	
       859	    29	 100.0	    32	.............................	TGACTTTTGCGCAGCCTCAGGGCTCCGGTTTG	
       798	    28	  89.7	    32	.....-......CA...............	AACAATTTGAAGTTTCTGCGCCAGGTCGTTTC	
       738	    29	  93.1	    32	............CA...............	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
       677	    29	  86.2	    32	......T.....CA..............C	CTTAGAGAAGCAAAAACCCCACCGAGTCAGGG	
       616	    29	 100.0	    32	.............................	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
       555	    29	  93.1	    32	............CA...............	GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG	
       494	    29	 100.0	    32	.............................	TTCCGGACTCCTGTTTCTGGCAGTGGATTAAA	
       433	    28	  82.8	     0	............CAC........-....A	|                               	
==========	======	======	======	=============================	================================	==================
        17	    29	  93.9	    32	GTATTCCCCCCGTGTGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGTGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCTTCATCACACCGAATGGTGTTGAGATTACCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAACTCCAAAAGCTGGTGGATTTTAGTGGCGCTATTTAATATTTTATAATCAACCGGATATTTTTAGA
# Right flank :  ACATAAAAACCGCAATGGTGGGGCTTTTGTTATGTGCCCCTACAAGCAGATGGGACTTTTTACAATCAAGGAAAGTTACTTTCTTCAGGATAACCCACATTCTGTCATATCTTGCAGGTTGCAATCAGAAAAGGCCTTACGTCGATAAATTCATGCCTTGAGCTGGTAAGGAAGTATGACGTTATAACTCTGCATTTCTGGTTGATTAAGGTAGGGCGGCATTCCTGCTTTAAAAACAATCACTAATTTTGAACGGTAGTCGTCTTGATCCCAACTGCTACCTGATGGACTAGGCACCTGCAAAGAACCAATTTATACTGTTTATATATACAGTGTGCGCCGGGAGACCGGTAAAGATCAAGGGGTGAAAGTCCCCGACCATTGAAGGACCAGCAATCCACAGGGT

# Questionable array : NO	 Score: 5.49
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.53,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGTGTGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,2] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [13-17] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [1.15,4.77   Confidence: MEDIUM] 

# Array family : I-E [Matched known repeat from this family],   
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