Array 1 187887-183959 **** Predicted by CRISPRDetect 2.4 *** >NZ_QQQK01000001.1 Klebsiella pneumoniae strain 2L7_Kp 2L7_S13__contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 187886 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 187827 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 187766 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 187705 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 187644 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 187583 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 187522 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 187461 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 187400 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 187339 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 187278 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 187217 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 187156 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 187095 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 187034 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 186973 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 186912 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 186851 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 186790 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 186729 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 186668 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 186607 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 186546 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 186485 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 186424 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 186363 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 186302 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 186241 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 186180 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 186119 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 186058 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 185997 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 185936 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 185875 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 185814 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 185753 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 185692 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 185631 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 185570 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 185509 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 185448 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 185387 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 185326 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 185265 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 185204 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 185143 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 185082 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 185021 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 184960 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 184899 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 184838 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 184777 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 184716 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 184655 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 184594 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 184533 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 184472 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 184411 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 184350 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 184289 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 184228 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 184167 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 184106 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 184045 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 183987 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //